FFCP PHASE1:Mm9::chr6:124706341..124706381,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13498 | |EntrezGene=13498 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O35126 | |UniProt=O35126 | ||
|association_with_transcript=123bp_to_NM_007881,uc009drr.1_5end | |association_with_transcript=123bp_to_NM_007881,uc009drr.1_5end | ||
|cluster_id=chr6:124706341..124706381,- | |||
|description=CAGE_peak_5_at_Atn1_5end | |description=CAGE_peak_5_at_Atn1_5end | ||
|id=chr6:124706341..124706381,- | |id=chr6:124706341..124706381,- | ||
|ontology_enrichment_celltype=CL:0002319!2.77e-11!43;CL:0000221!7.34e-11!44;CL:0000133!7.34e-11!44;CL:0000055!1.73e-10!50;CL:0000117!4.96e-10!23;CL:0000337!4.96e-10!23;CL:0000540!1.69e-09!33;CL:0000047!1.69e-09!33;CL:0000031!1.69e-09!33;CL:0000404!1.69e-09!33;CL:0000393!1.76e-09!39;CL:0000211!1.76e-09!39 | |ontology_enrichment_celltype=CL:0002319!2.77e-11!43;CL:0000221!7.34e-11!44;CL:0000133!7.34e-11!44;CL:0000055!1.73e-10!50;CL:0000117!4.96e-10!23;CL:0000337!4.96e-10!23;CL:0000540!1.69e-09!33;CL:0000047!1.69e-09!33;CL:0000031!1.69e-09!33;CL:0000404!1.69e-09!33;CL:0000393!1.76e-09!39;CL:0000211!1.76e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.23e-11,43;CL:0000221,3.19e-10,44;CL:0000133,3.19e-10,44;CL:0000117,4.51e-10,23;CL:0000337,4.51e-10,23;CL:0000393,3.79e-09,39;CL:0000211,3.79e-09,39;CL:0000540,4.30e-09,33;CL:0000047,4.30e-09,33;CL:0000031,4.30e-09,33;CL:0000404,4.30e-09,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-24!73;UBERON:0005743!1.72e-24!73;UBERON:0000073!4.16e-23!75;UBERON:0001016!4.16e-23!75;UBERON:0004121!1.02e-19!102;UBERON:0000924!1.02e-19!102;UBERON:0006601!1.02e-19!102;UBERON:0001049!9.66e-19!52;UBERON:0005068!9.66e-19!52;UBERON:0006241!9.66e-19!52;UBERON:0007135!9.66e-19!52;UBERON:0000955!3.01e-18!50;UBERON:0006238!3.01e-18!50;UBERON:0002616!1.41e-17!49;UBERON:0002346!1.86e-16!71;UBERON:0003075!1.86e-16!71;UBERON:0007284!1.86e-16!71;UBERON:0000033!1.93e-16!63;UBERON:0002020!2.32e-14!34;UBERON:0003080!7.61e-14!40;UBERON:0002780!2.98e-13!39;UBERON:0001890!2.98e-13!39;UBERON:0006240!2.98e-13!39;UBERON:0003056!5.81e-13!49;UBERON:0002791!5.53e-12!29;UBERON:0003528!5.53e-12!29;UBERON:0001893!5.53e-12!29;UBERON:0007811!8.28e-09!86;UBERON:0000153!2.10e-08!94;UBERON:0000956!1.51e-07!21;UBERON:0001869!1.51e-07!21;UBERON:0000203!1.51e-07!21;UBERON:0002619!3.76e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!1.72e-24!73;UBERON:0005743!1.72e-24!73;UBERON:0000073!4.16e-23!75;UBERON:0001016!4.16e-23!75;UBERON:0004121!1.02e-19!102;UBERON:0000924!1.02e-19!102;UBERON:0006601!1.02e-19!102;UBERON:0001049!9.66e-19!52;UBERON:0005068!9.66e-19!52;UBERON:0006241!9.66e-19!52;UBERON:0007135!9.66e-19!52;UBERON:0000955!3.01e-18!50;UBERON:0006238!3.01e-18!50;UBERON:0002616!1.41e-17!49;UBERON:0002346!1.86e-16!71;UBERON:0003075!1.86e-16!71;UBERON:0007284!1.86e-16!71;UBERON:0000033!1.93e-16!63;UBERON:0002020!2.32e-14!34;UBERON:0003080!7.61e-14!40;UBERON:0002780!2.98e-13!39;UBERON:0001890!2.98e-13!39;UBERON:0006240!2.98e-13!39;UBERON:0003056!5.81e-13!49;UBERON:0002791!5.53e-12!29;UBERON:0003528!5.53e-12!29;UBERON:0001893!5.53e-12!29;UBERON:0007811!8.28e-09!86;UBERON:0000153!2.10e-08!94;UBERON:0000956!1.51e-07!21;UBERON:0001869!1.51e-07!21;UBERON:0000203!1.51e-07!21;UBERON:0002619!3.76e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.71e-25,73;UBERON:0001016,3.75e-23,75;UBERON:0000073,1.08e-20,54;UBERON:0004121,6.36e-20,95;UBERON:0000924,6.36e-20,95;UBERON:0006601,6.36e-20,95;UBERON:0001049,3.23e-19,52;UBERON:0005068,3.23e-19,52;UBERON:0006241,3.23e-19,52;UBERON:0007135,3.23e-19,52;UBERON:0002346,1.90e-18,64;UBERON:0003075,1.90e-18,64;UBERON:0007284,1.90e-18,64;UBERON:0000955,9.64e-17,47;UBERON:0006238,9.64e-17,47;UBERON:0002616,4.76e-16,46;UBERON:0010371,4.76e-15,73;UBERON:0002020,9.84e-15,34;UBERON:0003080,3.11e-14,40;UBERON:0002780,1.33e-13,39;UBERON:0001890,1.33e-13,39;UBERON:0006240,1.33e-13,39;UBERON:0003056,4.43e-13,49;UBERON:0003528,3.48e-12,29;UBERON:0002791,3.48e-12,29;UBERON:0001893,3.48e-12,29;UBERON:0010314,1.61e-08,92;UBERON:0000956,1.81e-07,21;UBERON:0001869,1.81e-07,21;UBERON:0000203,1.81e-07,21;UBERON:0002619,2.83e-07,17 | |||
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| ||
|short_description=p5@Atn1 | |short_description=p5@Atn1 | ||
}} | }} |
Latest revision as of 16:04, 26 September 2015
Short description: | p5@Atn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Atn1_5end |
Coexpression cluster: | NA |
Association with transcript: | 123bp_to_NM_007881, uc009drr.1_5end |
EntrezGene: | Atn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.23e-11 | 43 |
ectodermal cell | 3.19e-10 | 44 |
neurectodermal cell | 3.19e-10 | 44 |
CNS neuron (sensu Vertebrata) | 4.51e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.51e-10 | 23 |
electrically responsive cell | 3.79e-09 | 39 |
electrically active cell | 3.79e-09 | 39 |
neuron | 4.30e-09 | 33 |
neuronal stem cell | 4.30e-09 | 33 |
neuroblast | 4.30e-09 | 33 |
electrically signaling cell | 4.30e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.71e-25 | 73 |
nervous system | 3.75e-23 | 75 |
regional part of nervous system | 1.08e-20 | 54 |
ectoderm-derived structure | 6.36e-20 | 95 |
ectoderm | 6.36e-20 | 95 |
presumptive ectoderm | 6.36e-20 | 95 |
neural tube | 3.23e-19 | 52 |
neural rod | 3.23e-19 | 52 |
future spinal cord | 3.23e-19 | 52 |
neural keel | 3.23e-19 | 52 |
neurectoderm | 1.90e-18 | 64 |
neural plate | 1.90e-18 | 64 |
presumptive neural plate | 1.90e-18 | 64 |
brain | 9.64e-17 | 47 |
future brain | 9.64e-17 | 47 |
regional part of brain | 4.76e-16 | 46 |
ecto-epithelium | 4.76e-15 | 73 |
gray matter | 9.84e-15 | 34 |
anterior neural tube | 3.11e-14 | 40 |
regional part of forebrain | 1.33e-13 | 39 |
forebrain | 1.33e-13 | 39 |
future forebrain | 1.33e-13 | 39 |
pre-chordal neural plate | 4.43e-13 | 49 |
brain grey matter | 3.48e-12 | 29 |
regional part of telencephalon | 3.48e-12 | 29 |
telencephalon | 3.48e-12 | 29 |
structure with developmental contribution from neural crest | 1.61e-08 | 92 |
cerebral cortex | 1.81e-07 | 21 |
cerebral hemisphere | 1.81e-07 | 21 |
pallium | 1.81e-07 | 21 |
regional part of cerebral cortex | 2.83e-07 | 17 |