FFCP PHASE1:Mm9::chr11:100334086..100334102,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:100334086..100334102,- to FFCP PHASE1:Mm9::chr11:100334086..100334102,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217194 | |EntrezGene=217194 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1520 | |||
|TSSclassifier=NA | |||
|UniProt=Q14DU1,Q8CE33 | |UniProt=Q14DU1,Q8CE33 | ||
|association_with_transcript=0bp_to_NM_172565,uc007llj.1_5end | |||
|cluster_id=chr11:100334086..100334102,- | |||
|description=CAGE_peak_1_at_Klhl11_5end | |||
|id=chr11:100334086..100334102,- | |||
|ontology_enrichment_celltype=CL:0000540!1.67e-12!33;CL:0000047!1.67e-12!33;CL:0000031!1.67e-12!33;CL:0000404!1.67e-12!33;CL:0000393!3.69e-12!39;CL:0000211!3.69e-12!39;CL:0000117!3.49e-10!23;CL:0000337!3.49e-10!23;CL:0000221!6.77e-08!44;CL:0000133!6.77e-08!44;CL:0002321!8.74e-08!70;CL:0000220!8.74e-08!70;CL:0002319!1.38e-07!43;CL:0000055!4.55e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.67e-12,33;CL:0000047,1.67e-12,33;CL:0000031,1.67e-12,33;CL:0000404,1.67e-12,33;CL:0000393,3.69e-12,39;CL:0000211,3.69e-12,39;CL:0000117,3.49e-10,23;CL:0000337,3.49e-10,23;CL:0000221,6.77e-08,44;CL:0000133,6.77e-08,44;CL:0002321,8.74e-08,70;CL:0002319,1.38e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.63e-19!73;UBERON:0005743!5.63e-19!73;UBERON:0000073!3.62e-18!75;UBERON:0001016!3.62e-18!75;UBERON:0004121!4.93e-18!102;UBERON:0000924!4.93e-18!102;UBERON:0006601!4.93e-18!102;UBERON:0002346!2.47e-16!71;UBERON:0003075!2.47e-16!71;UBERON:0007284!2.47e-16!71;UBERON:0001049!1.34e-14!52;UBERON:0005068!1.34e-14!52;UBERON:0006241!1.34e-14!52;UBERON:0007135!1.34e-14!52;UBERON:0000955!1.74e-14!50;UBERON:0006238!1.74e-14!50;UBERON:0000033!1.87e-14!63;UBERON:0000153!4.74e-14!94;UBERON:0002616!5.88e-14!49;UBERON:0007811!2.02e-13!86;UBERON:0002020!1.51e-12!34;UBERON:0003056!2.32e-11!49;UBERON:0003080!5.49e-11!40;UBERON:0002791!1.09e-10!29;UBERON:0003528!1.09e-10!29;UBERON:0001893!1.09e-10!29;UBERON:0002780!2.06e-10!39;UBERON:0001890!2.06e-10!39;UBERON:0006240!2.06e-10!39;UBERON:0000956!2.08e-07!21;UBERON:0001869!2.08e-07!21;UBERON:0000203!2.08e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.63e-19,73;UBERON:0001016,3.62e-18,75;UBERON:0004121,6.39e-17,95;UBERON:0000924,6.39e-17,95;UBERON:0006601,6.39e-17,95;UBERON:0000073,6.39e-16,54;UBERON:0002346,1.79e-15,64;UBERON:0003075,1.79e-15,64;UBERON:0007284,1.79e-15,64;UBERON:0010371,3.40e-15,73;UBERON:0001049,1.34e-14,52;UBERON:0005068,1.34e-14,52;UBERON:0006241,1.34e-14,52;UBERON:0007135,1.34e-14,52;UBERON:0000955,1.38e-12,47;UBERON:0006238,1.38e-12,47;UBERON:0002020,1.51e-12,34;UBERON:0002616,4.47e-12,46;UBERON:0003056,2.32e-11,49;UBERON:0003080,5.49e-11,40;UBERON:0003528,1.09e-10,29;UBERON:0002791,1.09e-10,29;UBERON:0001893,1.09e-10,29;UBERON:0002780,2.06e-10,39;UBERON:0001890,2.06e-10,39;UBERON:0006240,2.06e-10,39;UBERON:0010314,2.20e-08,92;UBERON:0000956,2.08e-07,21;UBERON:0001869,2.08e-07,21;UBERON:0000203,2.08e-07,21 | |||
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| ||
|short_description=p1@Klhl11 | |||
}} | }} |
Latest revision as of 16:27, 26 September 2015
Short description: | p1@Klhl11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Klhl11_5end |
Coexpression cluster: | MCL_coexpression_mm9:1520 |
Association with transcript: | 0bp_to_NM_172565, uc007llj.1_5end |
EntrezGene: | Klhl11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.67e-12 | 33 |
neuronal stem cell | 1.67e-12 | 33 |
neuroblast | 1.67e-12 | 33 |
electrically signaling cell | 1.67e-12 | 33 |
electrically responsive cell | 3.69e-12 | 39 |
electrically active cell | 3.69e-12 | 39 |
CNS neuron (sensu Vertebrata) | 3.49e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.49e-10 | 23 |
ectodermal cell | 6.77e-08 | 44 |
neurectodermal cell | 6.77e-08 | 44 |
embryonic cell | 8.74e-08 | 70 |
neural cell | 1.38e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.63e-19 | 73 |
nervous system | 3.62e-18 | 75 |
ectoderm-derived structure | 6.39e-17 | 95 |
ectoderm | 6.39e-17 | 95 |
presumptive ectoderm | 6.39e-17 | 95 |
regional part of nervous system | 6.39e-16 | 54 |
neurectoderm | 1.79e-15 | 64 |
neural plate | 1.79e-15 | 64 |
presumptive neural plate | 1.79e-15 | 64 |
ecto-epithelium | 3.40e-15 | 73 |
neural tube | 1.34e-14 | 52 |
neural rod | 1.34e-14 | 52 |
future spinal cord | 1.34e-14 | 52 |
neural keel | 1.34e-14 | 52 |
brain | 1.38e-12 | 47 |
future brain | 1.38e-12 | 47 |
gray matter | 1.51e-12 | 34 |
regional part of brain | 4.47e-12 | 46 |
pre-chordal neural plate | 2.32e-11 | 49 |
anterior neural tube | 5.49e-11 | 40 |
brain grey matter | 1.09e-10 | 29 |
regional part of telencephalon | 1.09e-10 | 29 |
telencephalon | 1.09e-10 | 29 |
regional part of forebrain | 2.06e-10 | 39 |
forebrain | 2.06e-10 | 39 |
future forebrain | 2.06e-10 | 39 |
structure with developmental contribution from neural crest | 2.20e-08 | 92 |
cerebral cortex | 2.08e-07 | 21 |
cerebral hemisphere | 2.08e-07 | 21 |
pallium | 2.08e-07 | 21 |