FFCP PHASE1:Mm9::chr4:148892304..148892318,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr4:148892304..148892318,+ to FFCP PHASE1:Mm9::chr4:148892304..148892318,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67087 | |EntrezGene=67087 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJN6 | |UniProt=Q9JJN6 | ||
|association_with_transcript=-26bp_to_ENSMUST00000030839_5end | |||
|cluster_id=chr4:148892304..148892318,+ | |||
|description=CAGE_peak_4_at_Ctnnbip1_5end | |||
|id=chr4:148892304..148892318,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.52e-11!23;CL:0000337!1.52e-11!23;CL:0000221!8.48e-11!44;CL:0000133!8.48e-11!44;CL:0000540!1.02e-10!33;CL:0000047!1.02e-10!33;CL:0000031!1.02e-10!33;CL:0000404!1.02e-10!33;CL:0002319!1.56e-10!43;CL:0000393!1.65e-07!39;CL:0000211!1.65e-07!39;CL:0000055!3.57e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.44e-14,23;CL:0000337,7.44e-14,23;CL:0000221,3.76e-13,44;CL:0000133,3.76e-13,44;CL:0002319,7.98e-13,43;CL:0000540,8.24e-13,33;CL:0000047,8.24e-13,33;CL:0000031,8.24e-13,33;CL:0000404,8.24e-13,33;CL:0000393,5.07e-09,39;CL:0000211,5.07e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.34e-12!73;UBERON:0005743!1.34e-12!73;UBERON:0000073!8.15e-12!75;UBERON:0001016!8.15e-12!75;UBERON:0001049!1.15e-09!52;UBERON:0005068!1.15e-09!52;UBERON:0006241!1.15e-09!52;UBERON:0007135!1.15e-09!52;UBERON:0004121!1.24e-09!102;UBERON:0000924!1.24e-09!102;UBERON:0006601!1.24e-09!102;UBERON:0003056!2.44e-09!49;UBERON:0002346!3.60e-09!71;UBERON:0003075!3.60e-09!71;UBERON:0007284!3.60e-09!71;UBERON:0002020!7.25e-09!34;UBERON:0002780!1.00e-08!39;UBERON:0001890!1.00e-08!39;UBERON:0006240!1.00e-08!39;UBERON:0003080!1.05e-08!40;UBERON:0000033!2.55e-08!63;UBERON:0002616!3.52e-08!49;UBERON:0000955!6.13e-08!50;UBERON:0006238!6.13e-08!50;UBERON:0000468!3.61e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-13,73;UBERON:0001016,8.58e-13,75;UBERON:0004121,6.23e-12,95;UBERON:0000924,6.23e-12,95;UBERON:0006601,6.23e-12,95;UBERON:0000073,6.59e-12,54;UBERON:0002346,9.46e-12,64;UBERON:0003075,9.46e-12,64;UBERON:0007284,9.46e-12,64;UBERON:0010371,2.56e-11,73;UBERON:0001049,1.87e-10,52;UBERON:0005068,1.87e-10,52;UBERON:0006241,1.87e-10,52;UBERON:0007135,1.87e-10,52;UBERON:0010314,9.46e-10,92;UBERON:0003056,3.06e-09,49;UBERON:0002020,3.76e-09,34;UBERON:0002780,1.31e-08,39;UBERON:0001890,1.31e-08,39;UBERON:0006240,1.31e-08,39;UBERON:0003080,1.32e-08,40;UBERON:0002616,4.55e-08,46;UBERON:0000955,1.18e-07,47;UBERON:0006238,1.18e-07,47 | |||
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| 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| ||
|short_description=p4@Ctnnbip1 | |||
}} | }} |
Latest revision as of 17:41, 26 September 2015
Short description: | p4@Ctnnbip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ctnnbip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -26bp_to_ENSMUST00000030839_5end |
EntrezGene: | Ctnnbip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.44e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.44e-14 | 23 |
ectodermal cell | 3.76e-13 | 44 |
neurectodermal cell | 3.76e-13 | 44 |
neural cell | 7.98e-13 | 43 |
neuron | 8.24e-13 | 33 |
neuronal stem cell | 8.24e-13 | 33 |
neuroblast | 8.24e-13 | 33 |
electrically signaling cell | 8.24e-13 | 33 |
electrically responsive cell | 5.07e-09 | 39 |
electrically active cell | 5.07e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.07e-13 | 73 |
nervous system | 8.58e-13 | 75 |
ectoderm-derived structure | 6.23e-12 | 95 |
ectoderm | 6.23e-12 | 95 |
presumptive ectoderm | 6.23e-12 | 95 |
regional part of nervous system | 6.59e-12 | 54 |
neurectoderm | 9.46e-12 | 64 |
neural plate | 9.46e-12 | 64 |
presumptive neural plate | 9.46e-12 | 64 |
ecto-epithelium | 2.56e-11 | 73 |
neural tube | 1.87e-10 | 52 |
neural rod | 1.87e-10 | 52 |
future spinal cord | 1.87e-10 | 52 |
neural keel | 1.87e-10 | 52 |
structure with developmental contribution from neural crest | 9.46e-10 | 92 |
pre-chordal neural plate | 3.06e-09 | 49 |
gray matter | 3.76e-09 | 34 |
regional part of forebrain | 1.31e-08 | 39 |
forebrain | 1.31e-08 | 39 |
future forebrain | 1.31e-08 | 39 |
anterior neural tube | 1.32e-08 | 40 |
regional part of brain | 4.55e-08 | 46 |
brain | 1.18e-07 | 47 |
future brain | 1.18e-07 | 47 |