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FFCP PHASE1:Mm9::chr4:155366713..155366783,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=117592
|EntrezGene=117592
|HGNC=
|HGNC=
|MCL_coexpression_id=964
|TSSclassifier=NA
|UniProt=Q91Z92,B1ASL0
|UniProt=Q91Z92,B1ASL0
|association_with_transcript=3bp_to_ENSMUST00000052185,NM_080445,uc008wfq.1_5end
|association_with_transcript=3bp_to_ENSMUST00000052185,NM_080445,uc008wfq.1_5end
|cluster_id=chr4:155366713..155366783,-
|description=CAGE_peak_1_at_B3galt6_5end
|description=CAGE_peak_1_at_B3galt6_5end
|id=chr4:155366713..155366783,-
|id=chr4:155366713..155366783,-
|ontology_enrichment_celltype=CL:0000221!1.80e-18!44;CL:0000133!1.80e-18!44;CL:0002319!2.25e-18!43;CL:0000540!1.02e-15!33;CL:0000047!1.02e-15!33;CL:0000031!1.02e-15!33;CL:0000404!1.02e-15!33;CL:0000117!4.40e-15!23;CL:0000337!4.40e-15!23;CL:0000055!5.06e-14!50;CL:0000393!1.60e-11!39;CL:0000211!1.60e-11!39
|ontology_enrichment_celltype=CL:0000221!1.80e-18!44;CL:0000133!1.80e-18!44;CL:0002319!2.25e-18!43;CL:0000540!1.02e-15!33;CL:0000047!1.02e-15!33;CL:0000031!1.02e-15!33;CL:0000404!1.02e-15!33;CL:0000117!4.40e-15!23;CL:0000337!4.40e-15!23;CL:0000055!5.06e-14!50;CL:0000393!1.60e-11!39;CL:0000211!1.60e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.80e-18,44;CL:0000133,1.80e-18,44;CL:0002319,2.25e-18,43;CL:0000540,1.02e-15,33;CL:0000047,1.02e-15,33;CL:0000031,1.02e-15,33;CL:0000404,1.02e-15,33;CL:0000117,4.40e-15,23;CL:0000337,4.40e-15,23;CL:0000393,1.60e-11,39;CL:0000211,1.60e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.57e-29!73;UBERON:0005743!4.57e-29!73;UBERON:0000073!4.70e-29!75;UBERON:0001016!4.70e-29!75;UBERON:0004121!2.97e-25!102;UBERON:0000924!2.97e-25!102;UBERON:0006601!2.97e-25!102;UBERON:0002346!8.27e-23!71;UBERON:0003075!8.27e-23!71;UBERON:0007284!8.27e-23!71;UBERON:0001049!1.33e-21!52;UBERON:0005068!1.33e-21!52;UBERON:0006241!1.33e-21!52;UBERON:0007135!1.33e-21!52;UBERON:0000955!1.08e-20!50;UBERON:0006238!1.08e-20!50;UBERON:0002616!2.65e-20!49;UBERON:0000033!9.39e-20!63;UBERON:0003056!6.00e-18!49;UBERON:0003080!1.19e-17!40;UBERON:0002780!2.00e-17!39;UBERON:0001890!2.00e-17!39;UBERON:0006240!2.00e-17!39;UBERON:0002020!2.16e-17!34;UBERON:0002791!4.00e-14!29;UBERON:0003528!4.00e-14!29;UBERON:0001893!4.00e-14!29;UBERON:0007811!9.95e-14!86;UBERON:0000153!1.60e-13!94;UBERON:0000956!2.53e-09!21;UBERON:0001869!2.53e-09!21;UBERON:0000203!2.53e-09!21;UBERON:0002619!1.04e-07!17;UBERON:0000479!4.70e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.57e-29,73;UBERON:0001016,4.70e-29,75;UBERON:0004121,1.86e-24,95;UBERON:0000924,1.86e-24,95;UBERON:0006601,1.86e-24,95;UBERON:0000073,9.55e-24,54;UBERON:0002346,1.84e-22,64;UBERON:0003075,1.84e-22,64;UBERON:0007284,1.84e-22,64;UBERON:0001049,1.33e-21,52;UBERON:0005068,1.33e-21,52;UBERON:0006241,1.33e-21,52;UBERON:0007135,1.33e-21,52;UBERON:0010371,1.18e-19,73;UBERON:0000955,2.94e-19,47;UBERON:0006238,2.94e-19,47;UBERON:0002616,7.11e-19,46;UBERON:0003056,6.00e-18,49;UBERON:0003080,1.19e-17,40;UBERON:0002780,2.00e-17,39;UBERON:0001890,2.00e-17,39;UBERON:0006240,2.00e-17,39;UBERON:0002020,2.16e-17,34;UBERON:0003528,4.00e-14,29;UBERON:0002791,4.00e-14,29;UBERON:0001893,4.00e-14,29;UBERON:0010314,2.37e-13,92;UBERON:0000956,2.53e-09,21;UBERON:0001869,2.53e-09,21;UBERON:0000203,2.53e-09,21;UBERON:0002619,1.04e-07,17;UBERON:0000479,4.70e-07,349
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84326065659,9.19988502463662,6.11415178489297,5.39457385539283,7.19085064810423,10.2084817373772,3.6292192521702,2.4853572523477,1.69107881605257,10.6156747691225,12.4093867842823,11.4726201122988,15.6283386408055,13.685446164753,7.51086327332825,11.1975770965797,8.38874755405687,3.62376181239009,5.47257011889944,5.68820017130721,11.9607877021197,11.6063381596255,7.40548690973432,8.05620130503666,5.56307793387542,6.49055427407832,4.87375439676105,5.35122184725182,5.79171730577999,4.43635214602098,4.0932309910696,4.61816839873581,5.37633750035217,4.53460767230423,4.21773311410723,2.33256027184637,5.37230772365051,7.92077335531981,5.81815673898664,8.24182309202693,7.71726164684637,12.0377304968487,9.60078132449013,12.889106622201,9.73922372846974,10.8267504876523,10.9613203163303,21.9064230243013,13.5004500046361,13.0593148935024,11.3285602246051,12.4262474820437,5.70830411712972,7.58147259461959,9.04888110496911,10.2104821168684,6.28839487883947,5.69914876195044,8.00088220085815,8.24140228955577,8.98573786857083,10.8659801058433,6.84394109703647,9.24269072791773,7.30403758265083,6.59459069770154,6.66251439885114,9.0495801343784,7.88013416425017,8.29509647993932,9.06588981767275,8.83193520806384,7.88599280486455,5.50174999093946,6.19934093863034,7.84870649814574,7.90518795488777,8.54607539705933,6.21955107767427,5.26139422875686,6.79020569229309,7.85599180320834,9.13489639556141,7.38783617816726,9.00308294973317,6.66228417099654,6.55882477335881,13.2399606307111,9.12333272937093,8.59484216193193,5.54736162999646,7.50010825006353,9.04284558919644
|phase1_expression=13.2923543096979,1.39590163055744,1.81999695755814,1.51232105653415,2.00358291978539,4.02910252588535,5.13947809310157,10.4589891987677,10.2775767170717,13.1076134740316,15.7520530767465,15.7948874810766,5.47842335779858,10.2281870830227,4.66353666541928,3.23960427823721,3.49780939064073,4.88966356305268,6.7186072466812,6.79023442876848,6.80346321208558,9.03547655928056,7.57479388502913,3.67982572424835,6.42345986988076,1.72269589234506,3.4460959692726,3.878482188346,8.7410772949932,5.29263272495855,9.3126814475228,20.3209815507082,24.6025915033828,15.8481681015439,6.64358725427932,8.14549762256613,5.9209113316087,4.18531630736908,2.3440060335714,2.61761871986899,5.88231488031014,3.41522742479223,3.88408282424923,5.41356317294982,6.79225439170748,4.40512205188036,11.7358701652206,10.4652075062614,14.4992880604751,12.2490836416799,8.81914456239784,17.2503077237966,4.19456515144341,3.62681071005672,1.34437519656986,7.71778308107841,4.01146815914259,5.67239301505187,24.4802917640113,35.4423956112262,28.5224131577781,11.1818695582814,8.89294796111139,15.7482450524245,16.8107281636386,13.4991221839759,12.8828047522914,11.9107674649682,15.4497522339632,16.4707244764663,15.3537221786509,25.4229376119385,18.7738259808871,20.0884910712525,18.8815577905926,17.4651569455904,16.5173821499083,13.4071704989447,11.2132769277058,29.6744147392936,29.2760459527711,23.4411016750542,17.588528937087,24.7615548413939,18.1829914854404,20.9186295686304,17.2269733766915,25.5367240780662,10.9802980333117,6.95258352982427,7.53647670624362,6.88339101585109,10.1995700056163,3.2382191498269,3.89865850468601,4.92829575807069,5.61777680527007,5.45377032249785,4.1565760736459,6.00677276667578,9.43650912503759,6.41632387071589,0,0,9.95858788651585,7.09407623330276,8.08839112023653,4.5673551887624,2.33044095282455,10.0940654564081,14.9197381018877,10.0473607843007,8.30215790121811,8.13902258984162,5.76184664964954,9.67632753238501,6.67426412882809,4.62717942143717,3.5384422077995,9.22071044700232,6.18356251689102,7.75800405016355,1.86391761218122,12.0040126774734,8.16842156572475,4.59822699375465,3.35482348616577,5.99902730993408,3.93917703926501,10.3355541189328,11.8950156732843,19.3507702253811,9.73416193076748,12.5300574091862,9.14267396062064,11.0324058886075,8.96186401882783,7.34001126599549,10.108910337347,5.89237196482127,9.23855145035196,15.6333431014762,11.7040384373477,8.89158425230719,8.36848939561333,7.55870949680614,10.1197862524507,10.8655415710387,9.7005596819779,6.99692496620931,7.9178005873777,10.302199424096,8.34141747676794,7.66154766348766,10.4948889568051,15.9227413454795,3.51106593656617,6.17634977075316,5.39910648851626,7.66365358381357,6.80125573945179,8.28285482720668,5.20838418287463,4.72234156193769,5.707883176833,4.88321283975857,6.17028823219124,2.56883753207773,6.58239399653922,4.26835406605648,3.32382119138008,5.11699955988663,4.83010253640311,2.68412837520744,9.46304768538573,15.1269780197548,2.64335026387038,6.34681359992506,8.31824177087412,8.82499353069666,7.21657783403723,7.66397393568702,5.78182913996663,6.08722003560189,3.32170343081158,8.89374355509659,8.29406189040889,5.57078121715222,5.65395852645448,5.39291645192533,1.72910439899755,4.38110801159608,11.1904061562318,9.13988100877831,10.1436962105772,9.16430975303914,7.37019451236978,8.20589092716727,8.28398636327771,3.98547399544926,4.70996183524124,4.93588655687202,7.11486305009157,6.34011401721157,4.52085688760367,6.2961391467759,5.07150303471257,6.99413763282009,8.14802725700543,3.45235364940973,4.53978634970099,4.94210543738547,7.18841032636773,4.46569137202204,6.24075346229121,5.55673531483646,2.87035861635059,4.3419916922703,5.91210208533135,10.8010104709176,6.51859905768104,8.82674446030978,6.57132695207806,5.02518772325447,5.2369600994923,7.61021226645415,6.77831119656621,4.87222317227305,5.58091690301205,5.89907932976657,6.38934432903814,5.49666422609744,6.03165135757089,8.15858525728064,4.91764273019036,6.07060841870411,9.47248480927973,10.9006868530749,5.08198330667694,1.76729649043061,10.0962630213202,9.37052986311932,8.83235930704476,8.12493913038677,14.4819138153556,9.34152551603147,6.8817819284732,12.2747460322751,10.6727700045561,11.8888887076069,8.51640511249612,16.3820355373875,8.47012188638596,7.9185659026817,5.30980553359851,10.1967867185092,8.46505959501303,6.03536255218874,9.44966057218473,9.53048958626175,6.71913562237375,9.08834323693764,6.41695281092498,7.26884543252377,6.32511651449993,6.18813259489121,11.5749465956288,11.5239100180039,13.4533031134065,14.1462443120851,9.22169214939823,17.3017753074008,12.6702745863633,11.2652031172402,6.10146440965647,8.89694697628045,6.61585194164886,6.10079135883476,3.39075296061402,6.63442174209714,8.11731939221328,8.20704498725306,5.82961673259701,6.11903496634682,3.93003025835061,9.49379592630823,6.2966139305702,6.02779062415011,4.37421528707281,6.40578884978263,2.88963330989554,2.79902904647316,2.62579950228405,4.77335309007557,12.3371037496643,8.94605655358134,8.7484326065659,9.19988502463662,6.11415178489297,5.39457385539283,7.19085064810423,10.2084817373772,3.6292192521702,2.4853572523477,1.69107881605257,10.6156747691225,12.4093867842823,11.4726201122988,15.6283386408055,13.685446164753,7.51086327332825,11.1975770965797,8.38874755405687,3.62376181239009,5.47257011889944,5.68820017130721,11.9607877021197,11.6063381596255,7.40548690973432,8.05620130503666,5.56307793387542,6.49055427407832,4.87375439676105,5.35122184725182,5.79171730577999,4.43635214602098,4.0932309910696,4.61816839873581,5.37633750035217,4.53460767230423,4.21773311410723,2.33256027184637,5.37230772365051,7.92077335531981,5.81815673898664,8.24182309202693,7.71726164684637,12.0377304968487,9.60078132449013,12.889106622201,9.73922372846974,10.8267504876523,10.9613203163303,21.9064230243013,13.5004500046361,13.0593148935024,11.3285602246051,12.4262474820437,5.70830411712972,7.58147259461959,9.04888110496911,10.2104821168684,6.28839487883947,5.69914876195044,8.00088220085815,8.24140228955577,8.98573786857083,10.8659801058433,6.84394109703647,9.24269072791773,7.30403758265083,6.59459069770154,6.66251439885114,9.0495801343784,7.88013416425017,8.29509647993932,9.06588981767275,8.83193520806384,7.88599280486455,5.50174999093946,6.19934093863034,7.84870649814574,7.90518795488777,8.54607539705933,6.21955107767427,5.26139422875686,6.79020569229309,7.85599180320834,9.13489639556141,7.38783617816726,9.00308294973317,6.66228417099654,6.55882477335881,13.2399606307111,9.12333272937093,8.59484216193193,5.54736162999646,7.50010825006353,9.04284558919644
|short_description=p1@B3galt6
|short_description=p1@B3galt6
}}
}}

Latest revision as of 20:24, 26 September 2015

Short description:p1@B3galt6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_B3galt6_5end
Coexpression cluster:MCL_coexpression_mm9:964
Association with transcript: 3bp_to_ENSMUST00000052185, NM_080445, uc008wfq.1_5end
EntrezGene:B3galt6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@B3galt6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E615.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.79
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G624.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.79
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C324.48
Mouse Granule cells, donor2.CNhs12357.11731-123E335.44
Mouse Granule cells, donor3.CNhs12108.11636-122C728.52
Mouse Meningeal cells, donor1.CNhs12132.11716-123C611.18
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C812.88
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.47
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.09
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D823.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E524.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.54
Mouse Schwann, donor1.CNhs12507.11728-123D910.98
Mouse Schwann, donor2.CNhs12573.11746-123F96.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.57
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D710.09
adrenal gland, embryo E14.CNhs11038.406-44C514.92
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F58.14
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I39.68
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F59.22
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.94
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F119.35
cortex, adult.CNhs10473.12-14D59.73
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.96
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.34
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C69.24
eyeball, embryo E14.CNhs10521.399-16E215.63
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D48.89
eyeball, neonate N00.CNhs11207.633-15C68.37
eyeball, neonate N01.CNhs11140.1532-43E77.56
eyeball, neonate N02.CNhs11205.1551-44G810.12
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H27.00
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B510.49
gonad, embryo E13.CNhs11044.1564-45I615.92
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.40
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F56.80
heart, embryo E13.CNhs11013.376-3I98.28
heart, embryo E14.CNhs10597.403-26D45.21
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G13.32
heart, neonate N20.CNhs11127.821-26I65.12
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E89.46
hippocampus, neonate N00.CNhs11228.627-43G115.13
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I58.32
intestine, embryo E13.CNhs11010.381-16D58.82
intestine, embryo E15.CNhs10602.976-16D87.22
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E98.89
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I911.19
kidney, embryo E15.CNhs10997.434-16F89.14
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C77.37
kidney, neonate N00.CNhs11214.646-21G78.21
kidney, neonate N10.CNhs11206.758-6D58.28
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F34.71
kidney, neonate N30.CNhs11203.1385-42H14.94
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E16.30
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B15.91
lung, embryo E12.CNhs10522.354-16G210.80
lung, embryo E14.CNhs10604.404-26F86.52
lung, embryo E15.CNhs11020.432-17C58.83
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A65.03
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C67.61
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A34.87
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C29.47
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.67
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H716.38
ovary, neonate N00.CNhs11217.1299-22I48.47
oviduct, adult pregnant day01.CNhs10500.988-6G67.92
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G96.72
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E611.52
pituitary gland, embryo E13.CNhs11009.370-44C713.45
pituitary gland, embryo E14.CNhs11037.398-44A514.15
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F617.30
pituitary gland, embryo E17.CNhs11039.1265-44F512.67
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G38.90
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H36.63
skin, neonate N06.CNhs11097.693-20I58.12
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D16.03
spleen, neonate N20.CNhs11112.824-19H14.37
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E312.34
stomach, embryo E15.CNhs10603.1252-16G88.95
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D59.20
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I13.63
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F510.62
testis, embryo E15.CNhs11034.443-27C512.41
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I515.63
testis, embryo E18.CNhs11027.503-18G513.69
testis, neonate N00.CNhs11189.1300-22B77.51
testis, neonate N07.CNhs11222.726-26I411.20
testis, neonate N10.CNhs11204.763-44D98.39
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I411.96
thymus, embryo E15.CNhs11005.430-45I211.61
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C18.06
thymus, embryo E18.CNhs10595.1273-19G45.56
thymus, neonate N02.CNhs11181.1541-43F86.49
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C45.35
thymus, neonate N07.CNhs11211.713-19D35.79
thymus, neonate N10.CNhs11194.748-24E44.44
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G25.38
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.33
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H29.05
whole body, embryo E14.5.CNhs10578.420-27D210.21
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I513.24
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B49.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.80e-1844
neurectodermal cell1.80e-1844
neural cell2.25e-1843
neuron1.02e-1533
neuronal stem cell1.02e-1533
neuroblast1.02e-1533
electrically signaling cell1.02e-1533
CNS neuron (sensu Vertebrata)4.40e-1523
neuroblast (sensu Vertebrata)4.40e-1523
electrically responsive cell1.60e-1139
electrically active cell1.60e-1139

Uber anatomy
Ontology termp-valuen
central nervous system4.57e-2973
nervous system4.70e-2975
ectoderm-derived structure1.86e-2495
ectoderm1.86e-2495
presumptive ectoderm1.86e-2495
regional part of nervous system9.55e-2454
neurectoderm1.84e-2264
neural plate1.84e-2264
presumptive neural plate1.84e-2264
neural tube1.33e-2152
neural rod1.33e-2152
future spinal cord1.33e-2152
neural keel1.33e-2152
ecto-epithelium1.18e-1973
brain2.94e-1947
future brain2.94e-1947
regional part of brain7.11e-1946
pre-chordal neural plate6.00e-1849
anterior neural tube1.19e-1740
regional part of forebrain2.00e-1739
forebrain2.00e-1739
future forebrain2.00e-1739
gray matter2.16e-1734
brain grey matter4.00e-1429
regional part of telencephalon4.00e-1429
telencephalon4.00e-1429
structure with developmental contribution from neural crest2.37e-1392
cerebral cortex2.53e-0921
cerebral hemisphere2.53e-0921
pallium2.53e-0921
regional part of cerebral cortex1.04e-0717
tissue4.70e-07349
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