FFCP PHASE1:Mm9::chr1:175604032..175604047,+: Difference between revisions
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{{FFCP|EntrezGene=100033459|HGNC=|MCL_coexpression_id=1124|UniProt=Q3V3Q4|association_with_transcript=0bp_to_ENSMUST00000085876_5end|description=CAGE_peak_2_at_Pydc3_5end|id=chr1:175604032..175604047,+|ontology_enrichment_celltype=CL:0000791!4.01e-15!9;CL:0000789!4.01e-15!9;CL:0002420!4.01e-15!9;CL:0002419!4.01e-15!9;CL:0000790!4.01e-15!9;CL:0002031!6.36e-15!25;CL:0000838!1.58e-13!12;CL:0000624!2.28e-13!8;CL:0000542!2.72e-12!13;CL:0000051!2.72e-12!13;CL:0000084!5.62e-12!11;CL:0000827!5.62e-12!11;CL:0000738!7.13e-11!17;CL:0002087!7.13e-11!17;CL:0000988!1.13e-10!32;CL:0002032!1.13e-10!32;CL:0000037!1.13e-10!32;CL:0000566!1.13e-10!32;CL:0000837!1.13e-10!32;CL:0000893!4.31e-10!6;CL:0002489!4.31e-10!6;CL:0000898!4.31e-10!6;CL:0000809!4.31e-10!6;CL:0000810!4.31e-10!6;CL:0000895!4.31e-10!6;CL:0000808!4.31e-10!6;CL:0000894!4.31e-10!6;CL:0000806!4.31e-10!6;CL:0000807!4.31e-10!6;CL:0000805!4.31e-10!6;CL:0002425!4.31e-10!6;CL:0002436!4.31e-10!6;CL:0002427!4.31e-10!6;CL:0002428!4.31e-10!6;CL:0002429!4.31e-10!6;CL:0002433!4.31e-10!6;CL:0002431!4.31e-10!6;CL:0002432!4.31e-10!6;CL:0000553!2.32e-07!6;CL:0000556!2.32e-07!6;CL:0002320!4.56e-07!46;CL:0000134!4.56e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,4.30e-30,9;CL:0000789,4.30e-30,9;CL:0002420,4.30e-30,9;CL:0002419,4.30e-30,9;CL:0000790,4.30e-30,9;CL:0000838,4.09e-29,12;CL:0000542,8.08e-27,13;CL:0000051,8.08e-27,13;CL:0002031,8.62e-26,25;CL:0000738,1.14e-25,17;CL:0002087,1.14e-25,17;CL:0000624,7.52e-25,8;CL:0000084,1.57e-24,11;CL:0000827,1.57e-24,11;CL:0000988,7.43e-20,32;CL:0002032,7.43e-20,32;CL:0000037,7.43e-20,32;CL:0000837,7.43e-20,32;CL:0000893,2.83e-15,6;CL:0002489,2.83e-15,6;CL:0000898,2.83e-15,6;CL:0000809,2.83e-15,6;CL:0000810,2.83e-15,6;CL:0000895,2.83e-15,6;CL:0000808,2.83e-15,6;CL:0000894,2.83e-15,6;CL:0000806,2.83e-15,6;CL:0000807,2.83e-15,6;CL:0000805,2.83e-15,6;CL:0002425,2.83e-15,6;CL:0002436,2.83e-15,6;CL:0002427,2.83e-15,6;CL:0002428,2.83e-15,6;CL:0002429,2.83e-15,6;CL:0002433,2.83e-15,6;CL:0002431,2.83e-15,6;CL:0002432,2.83e-15,6;CL:0002320,2.20e-13,46;CL:0000134,2.20e-13,46;CL:0000219,3.48e-11,54;CL:0000625,3.14e-07,1;CL:0000945,8.98e-07,1;CL:0000236,8.98e-07,1;CL:0000826,8.98e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.19e-23!48;UBERON:0002390!4.75e-21!45;UBERON:0003061!4.75e-21!45;UBERON:0004177!1.53e-20!29;UBERON:0002405!1.60e-19!70;UBERON:0002370!1.71e-17!23;UBERON:0000974!1.71e-17!23;UBERON:0004807!1.71e-17!23;UBERON:0005058!1.71e-17!23;UBERON:0003351!1.71e-17!23;UBERON:0009113!1.71e-17!23;UBERON:0003295!1.71e-17!23;UBERON:0009722!1.71e-17!23;UBERON:0005562!1.71e-17!23;UBERON:0007690!1.71e-17!23;UBERON:0006562!1.45e-16!24;UBERON:0003408!1.45e-16!24;UBERON:0001557!1.45e-16!24;UBERON:0001042!1.45e-16!24;UBERON:0008814!1.45e-16!24;UBERON:0009145!1.45e-16!24;UBERON:0005057!2.39e-15!51;UBERON:0000072!3.38e-14!27;UBERON:0000065!3.76e-14!41;UBERON:0001004!1.14e-13!42;UBERON:0003081!2.25e-12!88;UBERON:0000077!8.14e-12!97;UBERON:0001041!5.70e-11!92;UBERON:0005911!1.88e-10!69;UBERON:0000063!6.62e-10!35;UBERON:0003929!4.71e-09!55;UBERON:0002368!1.15e-08!60;UBERON:0004119!7.07e-08!130;UBERON:0000925!7.07e-08!130;UBERON:0006595!7.07e-08!130;UBERON:0000926!1.16e-07!193;UBERON:0004120!1.16e-07!193;UBERON:0006603!1.16e-07!193;UBERON:0002530!1.47e-07!65;UBERON:0001007!1.83e-07!128;UBERON:0001555!1.83e-07!128;UBERON:0007026!1.83e-07!128;UBERON:0003104!4.48e-07!131;UBERON:0009142!4.48e-07!131;UBERON:0002384!4.56e-07!46;UBERON:0004921!4.58e-07!126;UBERON:0004185!4.58e-07!126;UBERON:0000949!4.63e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.65e-15,48;UBERON:0002405,4.65e-15,48;UBERON:0002370,2.30e-14,23;UBERON:0000974,2.30e-14,23;UBERON:0004807,2.30e-14,23;UBERON:0005058,2.30e-14,23;UBERON:0003351,2.30e-14,23;UBERON:0009113,2.30e-14,23;UBERON:0003295,2.30e-14,23;UBERON:0009722,2.30e-14,23;UBERON:0005562,2.30e-14,23;UBERON:0007690,2.30e-14,23;UBERON:0006562,9.86e-14,24;UBERON:0003408,9.86e-14,24;UBERON:0001557,9.86e-14,24;UBERON:0001042,9.86e-14,24;UBERON:0008814,9.86e-14,24;UBERON:0009145,9.86e-14,24;UBERON:0002390,2.14e-13,45;UBERON:0003061,2.14e-13,45;UBERON:0002384,2.20e-13,46;UBERON:0000072,4.10e-12,27;UBERON:0004177,3.21e-11,29;UBERON:0005057,3.21e-11,29;UBERON:0000077,3.79e-09,35;UBERON:0007811,7.19e-09,36;UBERON:0000065,1.11e-07,41;UBERON:0001004,1.78e-07,42;UBERON:0000153,2.79e-07,43;UBERON:0000029,3.59e-07,1;UBERON:0001097,3.59e-07,1;UBERON:0003968,3.59e-07,1;UBERON:0001467,3.59e-07,1|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,1.68946466582,1.17032263160997,0.171217968225505,0.159544317990673,10.785645985666,3.4968160967599,0.666219523631325,0.202475267389826,0,2.99689057090326,3.42786084014347,0.84877930359606,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,4.35217285206807,6.04968838456435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.81931657357869,0.345369963731791,0,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,0,0.683483523191411,0,0.185194527369712,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0.179026695667481,0.198681354781265,0.480781798079875,0.295379054349154,0.302899349844443,0.457240839929999,0.403304740547362,1.46186821109629,1.15454209968395,1.40252282617883,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p2@Pydc3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100033459 | |||
|HGNC= | |||
|MCL_coexpression_id=1124 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V3Q4 | |||
|association_with_transcript=0bp_to_ENSMUST00000085876_5end | |||
|cluster_id=chr1:175604032..175604047,+ | |||
|description=CAGE_peak_2_at_Pydc3_5end | |||
|id=chr1:175604032..175604047,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.01e-15!9;CL:0000789!4.01e-15!9;CL:0002420!4.01e-15!9;CL:0002419!4.01e-15!9;CL:0000790!4.01e-15!9;CL:0002031!6.36e-15!25;CL:0000838!1.58e-13!12;CL:0000624!2.28e-13!8;CL:0000542!2.72e-12!13;CL:0000051!2.72e-12!13;CL:0000084!5.62e-12!11;CL:0000827!5.62e-12!11;CL:0000738!7.13e-11!17;CL:0002087!7.13e-11!17;CL:0000988!1.13e-10!32;CL:0002032!1.13e-10!32;CL:0000037!1.13e-10!32;CL:0000566!1.13e-10!32;CL:0000837!1.13e-10!32;CL:0000893!4.31e-10!6;CL:0002489!4.31e-10!6;CL:0000898!4.31e-10!6;CL:0000809!4.31e-10!6;CL:0000810!4.31e-10!6;CL:0000895!4.31e-10!6;CL:0000808!4.31e-10!6;CL:0000894!4.31e-10!6;CL:0000806!4.31e-10!6;CL:0000807!4.31e-10!6;CL:0000805!4.31e-10!6;CL:0002425!4.31e-10!6;CL:0002436!4.31e-10!6;CL:0002427!4.31e-10!6;CL:0002428!4.31e-10!6;CL:0002429!4.31e-10!6;CL:0002433!4.31e-10!6;CL:0002431!4.31e-10!6;CL:0002432!4.31e-10!6;CL:0000553!2.32e-07!6;CL:0000556!2.32e-07!6;CL:0002320!4.56e-07!46;CL:0000134!4.56e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.30e-30,9;CL:0000789,4.30e-30,9;CL:0002420,4.30e-30,9;CL:0002419,4.30e-30,9;CL:0000790,4.30e-30,9;CL:0000838,4.09e-29,12;CL:0000542,8.08e-27,13;CL:0000051,8.08e-27,13;CL:0002031,8.62e-26,25;CL:0000738,1.14e-25,17;CL:0002087,1.14e-25,17;CL:0000624,7.52e-25,8;CL:0000084,1.57e-24,11;CL:0000827,1.57e-24,11;CL:0000988,7.43e-20,32;CL:0002032,7.43e-20,32;CL:0000037,7.43e-20,32;CL:0000837,7.43e-20,32;CL:0000893,2.83e-15,6;CL:0002489,2.83e-15,6;CL:0000898,2.83e-15,6;CL:0000809,2.83e-15,6;CL:0000810,2.83e-15,6;CL:0000895,2.83e-15,6;CL:0000808,2.83e-15,6;CL:0000894,2.83e-15,6;CL:0000806,2.83e-15,6;CL:0000807,2.83e-15,6;CL:0000805,2.83e-15,6;CL:0002425,2.83e-15,6;CL:0002436,2.83e-15,6;CL:0002427,2.83e-15,6;CL:0002428,2.83e-15,6;CL:0002429,2.83e-15,6;CL:0002433,2.83e-15,6;CL:0002431,2.83e-15,6;CL:0002432,2.83e-15,6;CL:0002320,2.20e-13,46;CL:0000134,2.20e-13,46;CL:0000219,3.48e-11,54;CL:0000625,3.14e-07,1;CL:0000945,8.98e-07,1;CL:0000236,8.98e-07,1;CL:0000826,8.98e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.19e-23!48;UBERON:0002390!4.75e-21!45;UBERON:0003061!4.75e-21!45;UBERON:0004177!1.53e-20!29;UBERON:0002405!1.60e-19!70;UBERON:0002370!1.71e-17!23;UBERON:0000974!1.71e-17!23;UBERON:0004807!1.71e-17!23;UBERON:0005058!1.71e-17!23;UBERON:0003351!1.71e-17!23;UBERON:0009113!1.71e-17!23;UBERON:0003295!1.71e-17!23;UBERON:0009722!1.71e-17!23;UBERON:0005562!1.71e-17!23;UBERON:0007690!1.71e-17!23;UBERON:0006562!1.45e-16!24;UBERON:0003408!1.45e-16!24;UBERON:0001557!1.45e-16!24;UBERON:0001042!1.45e-16!24;UBERON:0008814!1.45e-16!24;UBERON:0009145!1.45e-16!24;UBERON:0005057!2.39e-15!51;UBERON:0000072!3.38e-14!27;UBERON:0000065!3.76e-14!41;UBERON:0001004!1.14e-13!42;UBERON:0003081!2.25e-12!88;UBERON:0000077!8.14e-12!97;UBERON:0001041!5.70e-11!92;UBERON:0005911!1.88e-10!69;UBERON:0000063!6.62e-10!35;UBERON:0003929!4.71e-09!55;UBERON:0002368!1.15e-08!60;UBERON:0004119!7.07e-08!130;UBERON:0000925!7.07e-08!130;UBERON:0006595!7.07e-08!130;UBERON:0000926!1.16e-07!193;UBERON:0004120!1.16e-07!193;UBERON:0006603!1.16e-07!193;UBERON:0002530!1.47e-07!65;UBERON:0001007!1.83e-07!128;UBERON:0001555!1.83e-07!128;UBERON:0007026!1.83e-07!128;UBERON:0003104!4.48e-07!131;UBERON:0009142!4.48e-07!131;UBERON:0002384!4.56e-07!46;UBERON:0004921!4.58e-07!126;UBERON:0004185!4.58e-07!126;UBERON:0000949!4.63e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.65e-15,48;UBERON:0002405,4.65e-15,48;UBERON:0002370,2.30e-14,23;UBERON:0000974,2.30e-14,23;UBERON:0004807,2.30e-14,23;UBERON:0005058,2.30e-14,23;UBERON:0003351,2.30e-14,23;UBERON:0009113,2.30e-14,23;UBERON:0003295,2.30e-14,23;UBERON:0009722,2.30e-14,23;UBERON:0005562,2.30e-14,23;UBERON:0007690,2.30e-14,23;UBERON:0006562,9.86e-14,24;UBERON:0003408,9.86e-14,24;UBERON:0001557,9.86e-14,24;UBERON:0001042,9.86e-14,24;UBERON:0008814,9.86e-14,24;UBERON:0009145,9.86e-14,24;UBERON:0002390,2.14e-13,45;UBERON:0003061,2.14e-13,45;UBERON:0002384,2.20e-13,46;UBERON:0000072,4.10e-12,27;UBERON:0004177,3.21e-11,29;UBERON:0005057,3.21e-11,29;UBERON:0000077,3.79e-09,35;UBERON:0007811,7.19e-09,36;UBERON:0000065,1.11e-07,41;UBERON:0001004,1.78e-07,42;UBERON:0000153,2.79e-07,43;UBERON:0000029,3.59e-07,1;UBERON:0001097,3.59e-07,1;UBERON:0003968,3.59e-07,1;UBERON:0001467,3.59e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,1.68946466582,1.17032263160997,0.171217968225505,0.159544317990673,10.785645985666,3.4968160967599,0.666219523631325,0.202475267389826,0,2.99689057090326,3.42786084014347,0.84877930359606,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,4.35217285206807,6.04968838456435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,5.95557132388495,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0.81931657357869,0.345369963731791,0,0,1.63171705145613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,0,0.683483523191411,0,0.185194527369712,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0.179026695667481,0.198681354781265,0.480781798079875,0.295379054349154,0.302899349844443,0.457240839929999,0.403304740547362,1.46186821109629,1.15454209968395,1.40252282617883,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Pydc3 | |||
}} |
Latest revision as of 20:38, 26 September 2015
Short description: | p2@Pydc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pydc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1124 |
Association with transcript: | 0bp_to_ENSMUST00000085876_5end |
EntrezGene: | Pydc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.65e-15 | 48 |
immune system | 4.65e-15 | 48 |
thymus | 2.30e-14 | 23 |
neck | 2.30e-14 | 23 |
respiratory system epithelium | 2.30e-14 | 23 |
hemolymphoid system gland | 2.30e-14 | 23 |
pharyngeal epithelium | 2.30e-14 | 23 |
thymic region | 2.30e-14 | 23 |
pharyngeal gland | 2.30e-14 | 23 |
entire pharyngeal arch endoderm | 2.30e-14 | 23 |
thymus primordium | 2.30e-14 | 23 |
early pharyngeal endoderm | 2.30e-14 | 23 |
pharynx | 9.86e-14 | 24 |
gland of gut | 9.86e-14 | 24 |
upper respiratory tract | 9.86e-14 | 24 |
chordate pharynx | 9.86e-14 | 24 |
pharyngeal arch system | 9.86e-14 | 24 |
pharyngeal region of foregut | 9.86e-14 | 24 |
hematopoietic system | 2.14e-13 | 45 |
blood island | 2.14e-13 | 45 |
connective tissue | 2.20e-13 | 46 |
segment of respiratory tract | 4.10e-12 | 27 |
hemopoietic organ | 3.21e-11 | 29 |
immune organ | 3.21e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 3.79e-09 | 35 |
craniocervical region | 7.19e-09 | 36 |
respiratory tract | 1.11e-07 | 41 |
respiratory system | 1.78e-07 | 42 |
anterior region of body | 2.79e-07 | 43 |
lymph node | 3.59e-07 | 1 |
axillary lymph node | 3.59e-07 | 1 |
peripheral lymph node | 3.59e-07 | 1 |
shoulder | 3.59e-07 | 1 |