FFCP PHASE1:Mm9::chr2:6793553..6793580,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14007 | |EntrezGene=14007 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1325 | |MCL_coexpression_id=1325 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_ENSMUST00000150624_5end | |association_with_transcript=62bp_to_ENSMUST00000150624_5end | ||
|cluster_id=chr2:6793553..6793580,- | |||
|description=CAGE_peak_15_at_Celf2_5end | |description=CAGE_peak_15_at_Celf2_5end | ||
|id=chr2:6793553..6793580,- | |id=chr2:6793553..6793580,- | ||
|ontology_enrichment_celltype=CL:0000540!6.35e-11!33;CL:0000047!6.35e-11!33;CL:0000031!6.35e-11!33;CL:0000404!6.35e-11!33;CL:0000221!5.70e-10!44;CL:0000133!5.70e-10!44;CL:0002319!9.76e-10!43;CL:0000117!2.31e-07!23;CL:0000337!2.31e-07!23;CL:0000393!2.77e-07!39;CL:0000211!2.77e-07!39 | |ontology_enrichment_celltype=CL:0000540!6.35e-11!33;CL:0000047!6.35e-11!33;CL:0000031!6.35e-11!33;CL:0000404!6.35e-11!33;CL:0000221!5.70e-10!44;CL:0000133!5.70e-10!44;CL:0002319!9.76e-10!43;CL:0000117!2.31e-07!23;CL:0000337!2.31e-07!23;CL:0000393!2.77e-07!39;CL:0000211!2.77e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.94e-13,33;CL:0000047,4.94e-13,33;CL:0000031,4.94e-13,33;CL:0000404,4.94e-13,33;CL:0000221,1.92e-10,44;CL:0000133,1.92e-10,44;CL:0002319,3.60e-10,43;CL:0000393,3.92e-09,39;CL:0000211,3.92e-09,39;CL:0000117,8.86e-09,23;CL:0000337,8.86e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.51e-19!102;UBERON:0000924!2.51e-19!102;UBERON:0006601!2.51e-19!102;UBERON:0001017!6.49e-19!73;UBERON:0005743!6.49e-19!73;UBERON:0000033!1.41e-18!63;UBERON:0000073!1.53e-18!75;UBERON:0001016!1.53e-18!75;UBERON:0002346!8.37e-17!71;UBERON:0003075!8.37e-17!71;UBERON:0007284!8.37e-17!71;UBERON:0003056!2.69e-16!49;UBERON:0001049!1.83e-14!52;UBERON:0005068!1.83e-14!52;UBERON:0006241!1.83e-14!52;UBERON:0007135!1.83e-14!52;UBERON:0000955!6.78e-14!50;UBERON:0006238!6.78e-14!50;UBERON:0002616!9.65e-14!49;UBERON:0003080!4.97e-12!40;UBERON:0002780!1.13e-11!39;UBERON:0001890!1.13e-11!39;UBERON:0006240!1.13e-11!39;UBERON:0000153!1.46e-10!94;UBERON:0002020!2.96e-10!34;UBERON:0007811!3.83e-10!86;UBERON:0000468!1.37e-09!333;UBERON:0002791!3.97e-09!29;UBERON:0003528!3.97e-09!29;UBERON:0001893!3.97e-09!29;UBERON:0000956!9.26e-08!21;UBERON:0001869!9.26e-08!21;UBERON:0000203!9.26e-08!21 | |ontology_enrichment_uberon=UBERON:0004121!2.51e-19!102;UBERON:0000924!2.51e-19!102;UBERON:0006601!2.51e-19!102;UBERON:0001017!6.49e-19!73;UBERON:0005743!6.49e-19!73;UBERON:0000033!1.41e-18!63;UBERON:0000073!1.53e-18!75;UBERON:0001016!1.53e-18!75;UBERON:0002346!8.37e-17!71;UBERON:0003075!8.37e-17!71;UBERON:0007284!8.37e-17!71;UBERON:0003056!2.69e-16!49;UBERON:0001049!1.83e-14!52;UBERON:0005068!1.83e-14!52;UBERON:0006241!1.83e-14!52;UBERON:0007135!1.83e-14!52;UBERON:0000955!6.78e-14!50;UBERON:0006238!6.78e-14!50;UBERON:0002616!9.65e-14!49;UBERON:0003080!4.97e-12!40;UBERON:0002780!1.13e-11!39;UBERON:0001890!1.13e-11!39;UBERON:0006240!1.13e-11!39;UBERON:0000153!1.46e-10!94;UBERON:0002020!2.96e-10!34;UBERON:0007811!3.83e-10!86;UBERON:0000468!1.37e-09!333;UBERON:0002791!3.97e-09!29;UBERON:0003528!3.97e-09!29;UBERON:0001893!3.97e-09!29;UBERON:0000956!9.26e-08!21;UBERON:0001869!9.26e-08!21;UBERON:0000203!9.26e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.28e-22,64;UBERON:0003075,3.28e-22,64;UBERON:0007284,3.28e-22,64;UBERON:0004121,6.60e-22,95;UBERON:0000924,6.60e-22,95;UBERON:0006601,6.60e-22,95;UBERON:0001017,3.04e-20,73;UBERON:0010371,4.81e-20,73;UBERON:0001016,5.03e-19,75;UBERON:0003056,2.50e-18,49;UBERON:0000073,7.72e-16,54;UBERON:0001049,3.32e-15,52;UBERON:0005068,3.32e-15,52;UBERON:0006241,3.32e-15,52;UBERON:0007135,3.32e-15,52;UBERON:0000955,7.68e-14,47;UBERON:0006238,7.68e-14,47;UBERON:0002616,1.17e-13,46;UBERON:0003080,2.62e-13,40;UBERON:0002780,6.85e-13,39;UBERON:0001890,6.85e-13,39;UBERON:0006240,6.85e-13,39;UBERON:0010314,9.34e-12,92;UBERON:0002020,3.27e-11,34;UBERON:0003528,7.22e-10,29;UBERON:0002791,7.22e-10,29;UBERON:0001893,7.22e-10,29;UBERON:0000956,1.90e-08,21;UBERON:0001869,1.90e-08,21;UBERON:0000203,1.90e-08,21 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0.233612640595526,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,1.96222640742402,2.85592037554813,2.72201858703997,0.55994568650145,0,0,0,0,0.257259436035947,0.286533439938757,0,4.24864567805155,2.64495489636016,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,6.32506635081714,3.78016627328734,3.99617426567626,1.14260393761521,1.98781686856452,2.57230678351403,3.45043695665651,1.83843757322004,1.10115880999389,2.68143409978894,2.4577045320999,4.3522474950964,3.29355516968675,2.6045668527838,2.51264699101243,0,2.44477196442896,3.24091444021034,1.99320353118744,2.79599168737951,0.530083353332288,0.831287161174641,0.579728977403356,0,0,1.07940638327563,1.94932925234301,0.448026887097336,2.24711072210803,0,0,0,2.25349471642689,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,0.68510327831436,0.258937883647172,0.148442139064825,0.520455980298408,0,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,3.61498392299779,1.76922110389975,5.17653919831709,3.5334642953663,1.45462575940567,0,4.39171195517321,4.39838084308256,0.255457055208591,0,0,0,2.69623150928681,4.11750542536764,0.879580464790051,1.56441888173049,4.09144731728529,2.0778804455956,2.59586020908412,1.2220723662038,0.995255764880744,0.758168275301024,2.73574412652416,1.95180664444056,3.21862946206862,3.42118046630164,4.52114453507145,3.6739709541717,4.74020765053944,5.99691037182265,2.06962696591213,0.431135985865684,2.64748512234947,1.93546236580344,1.97276159184817,0.556094498451196,2.78601733217733,0.61734640922383,0.995171334092466,0,0,0,1.44988040774851,0.469052119962192,1.08037236876609,2.13070262026689,0.590292695242212,0.771335564436891,0,0.536546802799238,0.350296027101508,0.329119699826961,0.164167464079095,0.486412857275134,0,0.219550115291051,0.671032093801859,2.3131894342054,2.46971069710283,0.330418782983798,0,0.213288250535234,1.39342003116263,2.57734922644187,1.21010114774006,0.889512175379481,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.342745537829186,1.1270773567308,0,0.193952487167626,0.420814919341911,0.189709611372772,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.405720242777006,0,0,0,0,0.549122826376163,0,0,0.312037673114561,0,0.179397413521912,0,1.66277871149944,0.37898282354097,1.14075483509418,1.01847051465113,1.64283173801951,2.1775813467436,1.42826184531608,2.73187107000918,1.57635144106191,0.664394068946325,1.11618338060241,1.80249646187312,1.72684981865896,1.15719246865209,0,0,0.491764273019036,1.10374698521893,0.80275294993896,1.64096361229084,0.491804836130026,9.59389523376617,4.10160685241134,3.12350995437311,3.01592756825919,1.91175038362042,2.89638276307112,3.11384183867716,6.07216052512342,1.46127928955656,4.74345333535828,1.92792789853084,0.141940085208269,0.534196811001766,1.62886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,0,2.06271086496374,2.04263763452273,1.62054984628179,1.94038025674132,1.71469628025274,4.25616560741457,3.21063871683727,2.63278432963394,2.13125464380219,0.23467170806371,0.63549621259146,0.441056796109924,0.65954501176592,2.26050197374268,1.08563264870681,0.596861720015682,0.164140899745061,0,1.48340241608408,0,1.03193433981611,0,0,0,0,0,0,0,0,1.26534397432454,1.21991680276109,0.648032044930808,0.209088296014469,0.218362563746178,0.269728692769641,0.578574190077352,0.26175594198403,0.518459893167171,0.621339313086926,0.56369293868419,0.149516546043979,0.165458490457098,1.36115831840833,0.387479470433193,1.35164900392623,1.40828686374905,1.8228613878153,2.30690557736564,0.966336483304024,2.59227005632079,0,0.608175645870493,0.616265742988964,1.16928740680016,0.895133478337407,0.596044064343795,0.721172697119813,1.32920574457119,0.807731599585181,0.609654453239999,0.201652370273681,1.07203668813728,0,0.467507608726276,2.49403421976732,0.221985953374065,0.269141569828427,0,0.579568782096571,0.187682475451182,0.915758121336325,0.643105137237198,0,5.0827665835536,4.60325236507177,4.01026859407578,1.89038500578056,1.37016503954128,2.2661816921691,0.675022500231806,1.80128481289688,3.17199686288943,2.5888015587591,1.24544817101012,2.79317411380722,2.04880326904961,2.43106717068294,2.30574478890781,2.94149613520023,2.22246727801615,2.47242068686673,3.20919209591815,1.51618327058278,2.78827229879264,2.45214243801899,2.71560371662659,2.81710670581425,3.33125719942557,5.23923060411381,3.82418275618023,3.08654752741928,3.29668720642645,3.23837624295674,2.74295401908332,1.24233064311536,2.62279808942053,3.0522747492789,2.72917203204459,3.29996970777538,2.92684756596436,3.41990624869196,2.98769050460896,0.561142271657738,3.55905054372522,3.05363895364247,1.63692417267876,2.47898945897546,1.54325288784913,1.99848462350357,2.8071793013449,2.14871054048298,3.63447830930802,3.75005412503176,2.55054619182464 | |phase1_expression=1.12104192973356,0,0,0,0,0,0.233612640595526,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,1.96222640742402,2.85592037554813,2.72201858703997,0.55994568650145,0,0,0,0,0.257259436035947,0.286533439938757,0,4.24864567805155,2.64495489636016,1.90149421051854,0.338844532069132,0,0,0,0,0.299600110518405,1.15265491596466,6.32506635081714,3.78016627328734,3.99617426567626,1.14260393761521,1.98781686856452,2.57230678351403,3.45043695665651,1.83843757322004,1.10115880999389,2.68143409978894,2.4577045320999,4.3522474950964,3.29355516968675,2.6045668527838,2.51264699101243,0,2.44477196442896,3.24091444021034,1.99320353118744,2.79599168737951,0.530083353332288,0.831287161174641,0.579728977403356,0,0,1.07940638327563,1.94932925234301,0.448026887097336,2.24711072210803,0,0,0,2.25349471642689,0,0,0,0.865964164044856,0.506719730950197,1.01104889002957,0.68510327831436,0.258937883647172,0.148442139064825,0.520455980298408,0,0.230615497256059,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,3.61498392299779,1.76922110389975,5.17653919831709,3.5334642953663,1.45462575940567,0,4.39171195517321,4.39838084308256,0.255457055208591,0,0,0,2.69623150928681,4.11750542536764,0.879580464790051,1.56441888173049,4.09144731728529,2.0778804455956,2.59586020908412,1.2220723662038,0.995255764880744,0.758168275301024,2.73574412652416,1.95180664444056,3.21862946206862,3.42118046630164,4.52114453507145,3.6739709541717,4.74020765053944,5.99691037182265,2.06962696591213,0.431135985865684,2.64748512234947,1.93546236580344,1.97276159184817,0.556094498451196,2.78601733217733,0.61734640922383,0.995171334092466,0,0,0,1.44988040774851,0.469052119962192,1.08037236876609,2.13070262026689,0.590292695242212,0.771335564436891,0,0.536546802799238,0.350296027101508,0.329119699826961,0.164167464079095,0.486412857275134,0,0.219550115291051,0.671032093801859,2.3131894342054,2.46971069710283,0.330418782983798,0,0.213288250535234,1.39342003116263,2.57734922644187,1.21010114774006,0.889512175379481,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.342745537829186,1.1270773567308,0,0.193952487167626,0.420814919341911,0.189709611372772,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.405720242777006,0,0,0,0,0.549122826376163,0,0,0.312037673114561,0,0.179397413521912,0,1.66277871149944,0.37898282354097,1.14075483509418,1.01847051465113,1.64283173801951,2.1775813467436,1.42826184531608,2.73187107000918,1.57635144106191,0.664394068946325,1.11618338060241,1.80249646187312,1.72684981865896,1.15719246865209,0,0,0.491764273019036,1.10374698521893,0.80275294993896,1.64096361229084,0.491804836130026,9.59389523376617,4.10160685241134,3.12350995437311,3.01592756825919,1.91175038362042,2.89638276307112,3.11384183867716,6.07216052512342,1.46127928955656,4.74345333535828,1.92792789853084,0.141940085208269,0.534196811001766,1.62886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.775284879504663,0.727067458955011,0.712994756769443,0.316036757935816,0,2.06271086496374,2.04263763452273,1.62054984628179,1.94038025674132,1.71469628025274,4.25616560741457,3.21063871683727,2.63278432963394,2.13125464380219,0.23467170806371,0.63549621259146,0.441056796109924,0.65954501176592,2.26050197374268,1.08563264870681,0.596861720015682,0.164140899745061,0,1.48340241608408,0,1.03193433981611,0,0,0,0,0,0,0,0,1.26534397432454,1.21991680276109,0.648032044930808,0.209088296014469,0.218362563746178,0.269728692769641,0.578574190077352,0.26175594198403,0.518459893167171,0.621339313086926,0.56369293868419,0.149516546043979,0.165458490457098,1.36115831840833,0.387479470433193,1.35164900392623,1.40828686374905,1.8228613878153,2.30690557736564,0.966336483304024,2.59227005632079,0,0.608175645870493,0.616265742988964,1.16928740680016,0.895133478337407,0.596044064343795,0.721172697119813,1.32920574457119,0.807731599585181,0.609654453239999,0.201652370273681,1.07203668813728,0,0.467507608726276,2.49403421976732,0.221985953374065,0.269141569828427,0,0.579568782096571,0.187682475451182,0.915758121336325,0.643105137237198,0,5.0827665835536,4.60325236507177,4.01026859407578,1.89038500578056,1.37016503954128,2.2661816921691,0.675022500231806,1.80128481289688,3.17199686288943,2.5888015587591,1.24544817101012,2.79317411380722,2.04880326904961,2.43106717068294,2.30574478890781,2.94149613520023,2.22246727801615,2.47242068686673,3.20919209591815,1.51618327058278,2.78827229879264,2.45214243801899,2.71560371662659,2.81710670581425,3.33125719942557,5.23923060411381,3.82418275618023,3.08654752741928,3.29668720642645,3.23837624295674,2.74295401908332,1.24233064311536,2.62279808942053,3.0522747492789,2.72917203204459,3.29996970777538,2.92684756596436,3.41990624869196,2.98769050460896,0.561142271657738,3.55905054372522,3.05363895364247,1.63692417267876,2.47898945897546,1.54325288784913,1.99848462350357,2.8071793013449,2.14871054048298,3.63447830930802,3.75005412503176,2.55054619182464 | ||
|short_description=p15@Celf2 | |short_description=p15@Celf2 | ||
}} | }} |
Latest revision as of 21:04, 26 September 2015
Short description: | p15@Celf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Celf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1325 |
Association with transcript: | 62bp_to_ENSMUST00000150624_5end |
EntrezGene: | Celf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.94e-13 | 33 |
neuronal stem cell | 4.94e-13 | 33 |
neuroblast | 4.94e-13 | 33 |
electrically signaling cell | 4.94e-13 | 33 |
ectodermal cell | 1.92e-10 | 44 |
neurectodermal cell | 1.92e-10 | 44 |
neural cell | 3.60e-10 | 43 |
electrically responsive cell | 3.92e-09 | 39 |
electrically active cell | 3.92e-09 | 39 |
CNS neuron (sensu Vertebrata) | 8.86e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.86e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.28e-22 | 64 |
neural plate | 3.28e-22 | 64 |
presumptive neural plate | 3.28e-22 | 64 |
ectoderm-derived structure | 6.60e-22 | 95 |
ectoderm | 6.60e-22 | 95 |
presumptive ectoderm | 6.60e-22 | 95 |
central nervous system | 3.04e-20 | 73 |
ecto-epithelium | 4.81e-20 | 73 |
nervous system | 5.03e-19 | 75 |
pre-chordal neural plate | 2.50e-18 | 49 |
regional part of nervous system | 7.72e-16 | 54 |
neural tube | 3.32e-15 | 52 |
neural rod | 3.32e-15 | 52 |
future spinal cord | 3.32e-15 | 52 |
neural keel | 3.32e-15 | 52 |
brain | 7.68e-14 | 47 |
future brain | 7.68e-14 | 47 |
regional part of brain | 1.17e-13 | 46 |
anterior neural tube | 2.62e-13 | 40 |
regional part of forebrain | 6.85e-13 | 39 |
forebrain | 6.85e-13 | 39 |
future forebrain | 6.85e-13 | 39 |
structure with developmental contribution from neural crest | 9.34e-12 | 92 |
gray matter | 3.27e-11 | 34 |
brain grey matter | 7.22e-10 | 29 |
regional part of telencephalon | 7.22e-10 | 29 |
telencephalon | 7.22e-10 | 29 |
cerebral cortex | 1.90e-08 | 21 |
cerebral hemisphere | 1.90e-08 | 21 |
pallium | 1.90e-08 | 21 |