FFCP PHASE1:Mm9::chr2:6793665..6793749,-: Difference between revisions
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{{FFCP|EntrezGene=14007|HGNC=|MCL_coexpression_id=1325|UniProt=|association_with_transcript=-22bp_to_ENSMUST00000150624_5end|description=CAGE_peak_3_at_Celf2_5end|id=chr2:6793665..6793749,-|ontology_enrichment_celltype=CL:0000221!1.03e-20!44;CL:0000133!1.03e-20!44;CL:0002319!3.04e-20!43;CL:0000055!4.23e-17!50;CL:0000540!8.21e-17!33;CL:0000047!8.21e-17!33;CL:0000031!8.21e-17!33;CL:0000404!8.21e-17!33;CL:0000393!1.87e-14!39;CL:0000211!1.87e-14!39;CL:0000117!3.02e-11!23;CL:0000337!3.02e-11!23;CL:0000107!5.78e-07!9|ontology_enrichment_celltype_v019_2=CL:0000221,8.23e-21,44;CL:0000133,8.23e-21,44;CL:0002319,2.45e-20,43;CL:0000540,6.89e-17,33;CL:0000047,6.89e-17,33;CL:0000031,6.89e-17,33;CL:0000404,6.89e-17,33;CL:0000393,1.61e-14,39;CL:0000211,1.61e-14,39;CL:0000117,2.70e-11,23;CL:0000337,2.70e-11,23;CL:0000107,5.43e-07,9;CL:0002321,9.63e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.76e-31!102;UBERON:0000924!2.76e-31!102;UBERON:0006601!2.76e-31!102;UBERON:0000073!6.62e-31!75;UBERON:0001016!6.62e-31!75;UBERON:0001017!9.70e-30!73;UBERON:0005743!9.70e-30!73;UBERON:0002346!1.09e-20!71;UBERON:0003075!1.09e-20!71;UBERON:0007284!1.09e-20!71;UBERON:0000033!1.79e-20!63;UBERON:0001049!5.95e-19!52;UBERON:0005068!5.95e-19!52;UBERON:0006241!5.95e-19!52;UBERON:0007135!5.95e-19!52;UBERON:0000955!7.68e-19!50;UBERON:0006238!7.68e-19!50;UBERON:0002616!3.96e-18!49;UBERON:0002020!6.95e-18!34;UBERON:0003056!1.17e-16!49;UBERON:0002791!6.59e-16!29;UBERON:0003528!6.59e-16!29;UBERON:0001893!6.59e-16!29;UBERON:0003080!8.72e-15!40;UBERON:0002780!2.49e-14!39;UBERON:0001890!2.49e-14!39;UBERON:0006240!2.49e-14!39;UBERON:0000956!1.65e-12!21;UBERON:0001869!1.65e-12!21;UBERON:0000203!1.65e-12!21;UBERON:0000468!1.96e-11!333;UBERON:0007811!5.14e-10!86;UBERON:0002619!6.75e-10!17;UBERON:0000153!9.04e-10!94;UBERON:0000922!4.16e-08!328;UBERON:0000010!7.89e-08!11;UBERON:0002410!5.78e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.68e-33,95;UBERON:0000924,1.68e-33,95;UBERON:0006601,1.68e-33,95;UBERON:0001016,4.71e-31,75;UBERON:0001017,7.00e-30,73;UBERON:0010371,3.42e-24,73;UBERON:0002346,5.14e-23,64;UBERON:0003075,5.14e-23,64;UBERON:0007284,5.14e-23,64;UBERON:0000073,2.21e-20,54;UBERON:0001049,4.87e-19,52;UBERON:0005068,4.87e-19,52;UBERON:0006241,4.87e-19,52;UBERON:0007135,4.87e-19,52;UBERON:0002020,5.76e-18,34;UBERON:0000955,2.32e-17,47;UBERON:0006238,2.32e-17,47;UBERON:0003056,9.79e-17,49;UBERON:0002616,1.17e-16,46;UBERON:0010314,2.48e-16,92;UBERON:0003528,5.58e-16,29;UBERON:0002791,5.58e-16,29;UBERON:0001893,5.58e-16,29;UBERON:0003080,7.49e-15,40;UBERON:0002780,2.15e-14,39;UBERON:0001890,2.15e-14,39;UBERON:0006240,2.15e-14,39;UBERON:0000956,1.45e-12,21;UBERON:0001869,1.45e-12,21;UBERON:0000203,1.45e-12,21;UBERON:0002619,6.13e-10,17;UBERON:0000010,7.34e-08,11;UBERON:0002410,5.43e-07,9;UBERON:0000922,7.99e-07,320|phase1_expression=9.44878197918284,0,0,0,0,0.503637815735669,0.467225281191051,0.258246646883153,1.68946466582,2.57470978954193,2.22583358693156,1.91453181588807,0.856003649656029,0.611942816932982,0.666219523631325,0,0,0.315462165358238,0,0.42438965179803,11.7359740408476,0.0992909512008853,0.261199789138935,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,5.41356317294982,5.98123894195136,2.9367480345869,5.47673941043627,26.1630187656536,25.2639110144643,33.0530828426282,20.5780039789283,25.8754615856949,0.335565212115473,1.45072428402269,1.00828139742739,3.34437266846731,8.88253663810146,9.28209766099396,13.3528864167335,12.1667925232568,19.0149421051854,5.42151251310611,5.33576877666684,0.449949858640699,1.97773272513395,0,8.68840320503374,15.3687322128622,62.6285258343205,46.8470606010967,56.3670896421704,14.8538511889978,17.8903518170807,44.9541233118881,46.6767443858811,50.5570332635512,17.6185409599022,34.4755812830007,25.6522910537927,19.7829431595291,17.9315781460723,19.7947080811569,17.588528937087,19.6966913511088,18.9469827243245,22.3917724959987,21.9252388430619,20.6903384866084,21.7334174866238,22.9737542724628,1.73918693221007,0.860423876981386,1.3599426674155,1.07940638327563,3.24888208723835,7.16843019355737,6.03911006566533,0,0,0,20.8448261269487,1.28326477414318,2.54805239706646,0,1.94841936910093,2.28023878927589,3.53867111510348,3.76806803072898,4.66088190564909,4.75014845007439,4.68410382268567,4.26251669636998,4.84292544237723,3.91878865436819,5.05631440683531,7.53999547978053,3.46072954828123,34.5592463038589,0,5.82360659810673,3.09178125844551,3.39412677194655,3.72783522436244,34.255353250351,29.9508790743241,1.78819938646014,0,0,0,21.5698520742945,38.4300506367646,27.1413400563787,27.2904182701874,24.0372529890511,20.9865925005156,24.9851545124347,17.9237280376557,5.59831367745419,6.57079171927554,9.89076722666428,6.11566081924707,10.8053989083732,11.884100567153,16.2761203262572,20.0027307504904,19.0889443224426,19.4899587084236,16.298312356558,1.94011193639558,3.78212160335639,5.27853372491847,10.302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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14007 | |||
|HGNC= | |||
|MCL_coexpression_id=1325 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENSMUST00000150624_5end | |||
|cluster_id=chr2:6793665..6793749,- | |||
|description=CAGE_peak_3_at_Celf2_5end | |||
|id=chr2:6793665..6793749,- | |||
|ontology_enrichment_celltype=CL:0000221!1.03e-20!44;CL:0000133!1.03e-20!44;CL:0002319!3.04e-20!43;CL:0000055!4.23e-17!50;CL:0000540!8.21e-17!33;CL:0000047!8.21e-17!33;CL:0000031!8.21e-17!33;CL:0000404!8.21e-17!33;CL:0000393!1.87e-14!39;CL:0000211!1.87e-14!39;CL:0000117!3.02e-11!23;CL:0000337!3.02e-11!23;CL:0000107!5.78e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.23e-21,44;CL:0000133,8.23e-21,44;CL:0002319,2.45e-20,43;CL:0000540,6.89e-17,33;CL:0000047,6.89e-17,33;CL:0000031,6.89e-17,33;CL:0000404,6.89e-17,33;CL:0000393,1.61e-14,39;CL:0000211,1.61e-14,39;CL:0000117,2.70e-11,23;CL:0000337,2.70e-11,23;CL:0000107,5.43e-07,9;CL:0002321,9.63e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.76e-31!102;UBERON:0000924!2.76e-31!102;UBERON:0006601!2.76e-31!102;UBERON:0000073!6.62e-31!75;UBERON:0001016!6.62e-31!75;UBERON:0001017!9.70e-30!73;UBERON:0005743!9.70e-30!73;UBERON:0002346!1.09e-20!71;UBERON:0003075!1.09e-20!71;UBERON:0007284!1.09e-20!71;UBERON:0000033!1.79e-20!63;UBERON:0001049!5.95e-19!52;UBERON:0005068!5.95e-19!52;UBERON:0006241!5.95e-19!52;UBERON:0007135!5.95e-19!52;UBERON:0000955!7.68e-19!50;UBERON:0006238!7.68e-19!50;UBERON:0002616!3.96e-18!49;UBERON:0002020!6.95e-18!34;UBERON:0003056!1.17e-16!49;UBERON:0002791!6.59e-16!29;UBERON:0003528!6.59e-16!29;UBERON:0001893!6.59e-16!29;UBERON:0003080!8.72e-15!40;UBERON:0002780!2.49e-14!39;UBERON:0001890!2.49e-14!39;UBERON:0006240!2.49e-14!39;UBERON:0000956!1.65e-12!21;UBERON:0001869!1.65e-12!21;UBERON:0000203!1.65e-12!21;UBERON:0000468!1.96e-11!333;UBERON:0007811!5.14e-10!86;UBERON:0002619!6.75e-10!17;UBERON:0000153!9.04e-10!94;UBERON:0000922!4.16e-08!328;UBERON:0000010!7.89e-08!11;UBERON:0002410!5.78e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.68e-33,95;UBERON:0000924,1.68e-33,95;UBERON:0006601,1.68e-33,95;UBERON:0001016,4.71e-31,75;UBERON:0001017,7.00e-30,73;UBERON:0010371,3.42e-24,73;UBERON:0002346,5.14e-23,64;UBERON:0003075,5.14e-23,64;UBERON:0007284,5.14e-23,64;UBERON:0000073,2.21e-20,54;UBERON:0001049,4.87e-19,52;UBERON:0005068,4.87e-19,52;UBERON:0006241,4.87e-19,52;UBERON:0007135,4.87e-19,52;UBERON:0002020,5.76e-18,34;UBERON:0000955,2.32e-17,47;UBERON:0006238,2.32e-17,47;UBERON:0003056,9.79e-17,49;UBERON:0002616,1.17e-16,46;UBERON:0010314,2.48e-16,92;UBERON:0003528,5.58e-16,29;UBERON:0002791,5.58e-16,29;UBERON:0001893,5.58e-16,29;UBERON:0003080,7.49e-15,40;UBERON:0002780,2.15e-14,39;UBERON:0001890,2.15e-14,39;UBERON:0006240,2.15e-14,39;UBERON:0000956,1.45e-12,21;UBERON:0001869,1.45e-12,21;UBERON:0000203,1.45e-12,21;UBERON:0002619,6.13e-10,17;UBERON:0000010,7.34e-08,11;UBERON:0002410,5.43e-07,9;UBERON:0000922,7.99e-07,320 | |||
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| |||
|short_description=p3@Celf2 | |||
}} |
Latest revision as of 21:06, 26 September 2015
Short description: | p3@Celf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Celf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1325 |
Association with transcript: | -22bp_to_ENSMUST00000150624_5end |
EntrezGene: | Celf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.23e-21 | 44 |
neurectodermal cell | 8.23e-21 | 44 |
neural cell | 2.45e-20 | 43 |
neuron | 6.89e-17 | 33 |
neuronal stem cell | 6.89e-17 | 33 |
neuroblast | 6.89e-17 | 33 |
electrically signaling cell | 6.89e-17 | 33 |
electrically responsive cell | 1.61e-14 | 39 |
electrically active cell | 1.61e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.70e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.70e-11 | 23 |
autonomic neuron | 5.43e-07 | 9 |
embryonic cell | 9.63e-07 | 70 |