Personal tools

FFCP PHASE1:Mm9::chr4:20705674..20705740,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=269513
|EntrezGene=269513
|HGNC=
|HGNC=
|MCL_coexpression_id=100
|TSSclassifier=NA
|UniProt=Q3URJ8
|UniProt=Q3URJ8
|association_with_transcript=0bp_to_ENSMUST00000119374_5end
|association_with_transcript=0bp_to_ENSMUST00000119374_5end
|cluster_id=chr4:20705674..20705740,-
|description=CAGE_peak_1_at_Nkain3_5end
|description=CAGE_peak_1_at_Nkain3_5end
|id=chr4:20705674..20705740,-
|id=chr4:20705674..20705740,-
|ontology_enrichment_celltype=CL:0000540!5.53e-13!33;CL:0000047!5.53e-13!33;CL:0000031!5.53e-13!33;CL:0000404!5.53e-13!33;CL:0000117!4.75e-12!23;CL:0000337!4.75e-12!23;CL:0000393!8.64e-12!39;CL:0000211!8.64e-12!39;CL:0002319!1.05e-07!43;CL:0000221!1.28e-07!44;CL:0000133!1.28e-07!44;CL:0000055!7.41e-07!50
|ontology_enrichment_celltype=CL:0000540!5.53e-13!33;CL:0000047!5.53e-13!33;CL:0000031!5.53e-13!33;CL:0000404!5.53e-13!33;CL:0000117!4.75e-12!23;CL:0000337!4.75e-12!23;CL:0000393!8.64e-12!39;CL:0000211!8.64e-12!39;CL:0002319!1.05e-07!43;CL:0000221!1.28e-07!44;CL:0000133!1.28e-07!44;CL:0000055!7.41e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.28e-13,23;CL:0000337,3.28e-13,23;CL:0000540,4.11e-13,33;CL:0000047,4.11e-13,33;CL:0000031,4.11e-13,33;CL:0000404,4.11e-13,33;CL:0000393,7.47e-11,39;CL:0000211,7.47e-11,39;CL:0002319,3.48e-08,43;CL:0000221,8.96e-08,44;CL:0000133,8.96e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.24e-12!73;UBERON:0005743!3.24e-12!73;UBERON:0003056!3.28e-11!49;UBERON:0000073!3.41e-11!75;UBERON:0001016!3.41e-11!75;UBERON:0002346!6.81e-11!71;UBERON:0003075!6.81e-11!71;UBERON:0007284!6.81e-11!71;UBERON:0002020!4.13e-10!34;UBERON:0001049!5.52e-10!52;UBERON:0005068!5.52e-10!52;UBERON:0006241!5.52e-10!52;UBERON:0007135!5.52e-10!52;UBERON:0004121!2.02e-09!102;UBERON:0000924!2.02e-09!102;UBERON:0006601!2.02e-09!102;UBERON:0002780!3.09e-09!39;UBERON:0001890!3.09e-09!39;UBERON:0006240!3.09e-09!39;UBERON:0003080!3.62e-09!40;UBERON:0000033!4.24e-09!63;UBERON:0000955!3.93e-08!50;UBERON:0006238!3.93e-08!50;UBERON:0002616!4.49e-08!49;UBERON:0000468!1.18e-07!333;UBERON:0002791!2.14e-07!29;UBERON:0003528!2.14e-07!29;UBERON:0001893!2.14e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.86e-12,64;UBERON:0003075,3.86e-12,64;UBERON:0007284,3.86e-12,64;UBERON:0003056,1.19e-11,49;UBERON:0002020,7.99e-11,34;UBERON:0001017,8.05e-11,73;UBERON:0000073,3.65e-10,54;UBERON:0001016,4.16e-10,75;UBERON:0002780,8.75e-10,39;UBERON:0001890,8.75e-10,39;UBERON:0006240,8.75e-10,39;UBERON:0001049,1.17e-09,52;UBERON:0005068,1.17e-09,52;UBERON:0006241,1.17e-09,52;UBERON:0007135,1.17e-09,52;UBERON:0003080,2.79e-09,40;UBERON:0004121,5.47e-09,95;UBERON:0000924,5.47e-09,95;UBERON:0006601,5.47e-09,95;UBERON:0010371,8.78e-09,73;UBERON:0003528,1.29e-07,29;UBERON:0002791,1.29e-07,29;UBERON:0001893,1.29e-07,29;UBERON:0010314,1.34e-07,92;UBERON:0002616,2.76e-07,46;UBERON:0000955,6.31e-07,47;UBERON:0006238,6.31e-07,47
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0,0,1.30815093828268,0.219686182734472,0,0,0,0,0,0,2.31533492432352,0.85960031981627,1.03134418455488,15.3760510253294,12.1667925232568,20.2826049121977,0.677689064138264,0,0,0,0,0.299600110518405,0,37.2245708187435,18.3608076131099,27.552569937031,4.57041575046086,6.84692476950002,12.9840247167851,7.95517409451362,10.1114066527102,3.30347642998166,1.40456071893706,0.921639199537461,7.12185953743047,6.03818447775904,13.022834263919,0.279182999001381,1.12552522006336,1.83357897332172,10.606629077052,9.96601765593721,15.8439528951505,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,1.04091196059682,0,0.922461989024234,0.150722640552623,0.705532242814229,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.599162557619291,1.83000241127451,13.3193613239636,1.04294592115366,2.04572365864264,1.0389402227978,2.10913641988085,4.27725328171328,0.124406970610093,0,0,2.73252930221678,6.66716102857071,5.22180176435513,4.82255417074288,5.57899293040888,3.58718416797579,3.46696380870997,0.258703370739016,2.37124792226126,2.26927296201383,3.69497360744293,1.97276159184817,1.94633074457919,0.348252166522167,0.823128545631774,7.56330213910274,0,0,0,4.14251545071004,1.17263029990548,1.08037236876609,2.13070262026689,1.37734962223183,0.462801338662135,1.39520366850245,0.536546802799238,0.817357396570186,0.658239399653922,0.32833492815819,0.0810688095458557,0,0.439100230582101,0.134206418760372,7.36014819974445,17.3908794920991,0,0,3.83918850963421,4.87697010906921,1.67527699718721,1.81515172161008,0.22237804384487,1.14135375667535,0,0.329397909448022,0.754005626400808,0.795825888164603,0.779856348476481,0,0.216138049874694,0,3.03468641524931,6.39791670614481,5.63538678365402,4.48032921259691,2.13347735884388,3.50679099451593,0.632365371242573,0,0,0,0,1.00107063429656,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0,4.73728529426212,0,1.69745085775188,0.469380496577004,0.837531287209079,0.238043640886014,0,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0.94652465824877,1.95219372148319,2.15423397732799,1.19484398976276,2.00518806674155,1.13230612315533,3.64329631507405,2.63030272120181,1.97643888973262,0.963963949265421,0.851640511249612,4.27357448801413,8.1443479676788,5.44401405809367,0,1.21390318077491,2.11626489875326,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,0,0,3.06103859853227,0.258717367565509,4.71541477069503,8.6896714484714,4.8159580752559,5.92376474167636,2.74018454203139,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.241251699712623,0.119372344003136,0.656563598980245,0,0.370850604021019,0,3.50857675537478,0.925972636848558,0,0,0,0,0,0,0,3.79603192297362,1.42323626988794,1.62008011232702,0.627264888043406,0.655087691238533,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,4.03694674318743,3.30916980914195,3.30567020184881,1.29159823477731,1.35164900392623,2.46450201156083,1.8228613878153,0.629156066554265,0,0,0,0.810900861160657,2.2596410576262,0.389762468933385,0.716106782669926,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,3.47988086107804,0.214368379079066,0,1.6942555278512,2.76195141904306,2.29158205375759,1.20297227640581,1.37016503954128,1.5107877947794,0,1.80128481289688,0.906284817968409,0.51776031175182,1.66059756134683,13.5668456956351,11.0976843740187,4.37592090722929,1.88651846365184,1.83843508450014,3.55594764482584,3.7086310303001,1.92551525755089,4.29585259998456,7.09742039692671,4.14977951049368,3.65201879132541,4.35371036353111,4.42253110958222,4.28664322154766,4.40360438590451,4.82273051159263,4.12085900803307,3.23837624295674,3.42869252385415,3.72699192934609,2.38436189947321,5.66851024866081,4.14081273827455,3.04612588410035,4.39027134894654,4.47218509444333,3.12349461845482,7.2948495315506,4.98267076121531,3.34915240076916,2.86461730218783,4.80304207676495,1.73615949883027,6.74488560432454,3.04111090979031,3.00819475667618,0.57386499620653,0.441182838239031,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0,0,1.30815093828268,0.219686182734472,0,0,0,0,0,0,2.31533492432352,0.85960031981627,1.03134418455488,15.3760510253294,12.1667925232568,20.2826049121977,0.677689064138264,0,0,0,0,0.299600110518405,0,37.2245708187435,18.3608076131099,27.552569937031,4.57041575046086,6.84692476950002,12.9840247167851,7.95517409451362,10.1114066527102,3.30347642998166,1.40456071893706,0.921639199537461,7.12185953743047,6.03818447775904,13.022834263919,0.279182999001381,1.12552522006336,1.83357897332172,10.606629077052,9.96601765593721,15.8439528951505,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,1.04091196059682,0,0.922461989024234,0.150722640552623,0.705532242814229,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.599162557619291,1.83000241127451,13.3193613239636,1.04294592115366,2.04572365864264,1.0389402227978,2.10913641988085,4.27725328171328,0.124406970610093,0,0,2.73252930221678,6.66716102857071,5.22180176435513,4.82255417074288,5.57899293040888,3.58718416797579,3.46696380870997,0.258703370739016,2.37124792226126,2.26927296201383,3.69497360744293,1.97276159184817,1.94633074457919,0.348252166522167,0.823128545631774,7.56330213910274,0,0,0,4.14251545071004,1.17263029990548,1.08037236876609,2.13070262026689,1.37734962223183,0.462801338662135,1.39520366850245,0.536546802799238,0.817357396570186,0.658239399653922,0.32833492815819,0.0810688095458557,0,0.439100230582101,0.134206418760372,7.36014819974445,17.3908794920991,0,0,3.83918850963421,4.87697010906921,1.67527699718721,1.81515172161008,0.22237804384487,1.14135375667535,0,0.329397909448022,0.754005626400808,0.795825888164603,0.779856348476481,0,0.216138049874694,0,3.03468641524931,6.39791670614481,5.63538678365402,4.48032921259691,2.13347735884388,3.50679099451593,0.632365371242573,0,0,0,0,1.00107063429656,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0,4.73728529426212,0,1.69745085775188,0.469380496577004,0.837531287209079,0.238043640886014,0,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0,0,0.160550589987792,0.468846746368813,0,0,0.94652465824877,1.95219372148319,2.15423397732799,1.19484398976276,2.00518806674155,1.13230612315533,3.64329631507405,2.63030272120181,1.97643888973262,0.963963949265421,0.851640511249612,4.27357448801413,8.1443479676788,5.44401405809367,0,1.21390318077491,2.11626489875326,0.565815239267694,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,0,0,3.06103859853227,0.258717367565509,4.71541477069503,8.6896714484714,4.8159580752559,5.92376474167636,2.74018454203139,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.241251699712623,0.119372344003136,0.656563598980245,0,0.370850604021019,0,3.50857675537478,0.925972636848558,0,0,0,0,0,0,0,3.79603192297362,1.42323626988794,1.62008011232702,0.627264888043406,0.655087691238533,0.404593039154462,0.247960367176008,0.26175594198403,0,0,0,4.03694674318743,3.30916980914195,3.30567020184881,1.29159823477731,1.35164900392623,2.46450201156083,1.8228613878153,0.629156066554265,0,0,0,0.810900861160657,2.2596410576262,0.389762468933385,0.716106782669926,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0.563047426353546,3.47988086107804,0.214368379079066,0,1.6942555278512,2.76195141904306,2.29158205375759,1.20297227640581,1.37016503954128,1.5107877947794,0,1.80128481289688,0.906284817968409,0.51776031175182,1.66059756134683,13.5668456956351,11.0976843740187,4.37592090722929,1.88651846365184,1.83843508450014,3.55594764482584,3.7086310303001,1.92551525755089,4.29585259998456,7.09742039692671,4.14977951049368,3.65201879132541,4.35371036353111,4.42253110958222,4.28664322154766,4.40360438590451,4.82273051159263,4.12085900803307,3.23837624295674,3.42869252385415,3.72699192934609,2.38436189947321,5.66851024866081,4.14081273827455,3.04612588410035,4.39027134894654,4.47218509444333,3.12349461845482,7.2948495315506,4.98267076121531,3.34915240076916,2.86461730218783,4.80304207676495,1.73615949883027,6.74488560432454,3.04111090979031,3.00819475667618,0.57386499620653,0.441182838239031,0
|short_description=p1@Nkain3
|short_description=p1@Nkain3
}}
}}

Latest revision as of 21:13, 26 September 2015

Short description:p1@Nkain3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nkain3_5end
Coexpression cluster:MCL_coexpression_mm9:100
Association with transcript: 0bp_to_ENSMUST00000119374_5end
EntrezGene:Nkain3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nkain3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C315.38
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.55
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.84
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F113.32
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I67.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G117.39
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F86.40
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G73.51
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B98.69
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H211.10
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.28e-1323
neuroblast (sensu Vertebrata)3.28e-1323
neuron4.11e-1333
neuronal stem cell4.11e-1333
neuroblast4.11e-1333
electrically signaling cell4.11e-1333
electrically responsive cell7.47e-1139
electrically active cell7.47e-1139
neural cell3.48e-0843
ectodermal cell8.96e-0844
neurectodermal cell8.96e-0844

Uber anatomy
Ontology termp-valuen
neurectoderm3.86e-1264
neural plate3.86e-1264
presumptive neural plate3.86e-1264
pre-chordal neural plate1.19e-1149
gray matter7.99e-1134
central nervous system8.05e-1173
regional part of nervous system3.65e-1054
nervous system4.16e-1075
regional part of forebrain8.75e-1039
forebrain8.75e-1039
future forebrain8.75e-1039
neural tube1.17e-0952
neural rod1.17e-0952
future spinal cord1.17e-0952
neural keel1.17e-0952
anterior neural tube2.79e-0940
ectoderm-derived structure5.47e-0995
ectoderm5.47e-0995
presumptive ectoderm5.47e-0995
ecto-epithelium8.78e-0973
brain grey matter1.29e-0729
regional part of telencephalon1.29e-0729
telencephalon1.29e-0729
structure with developmental contribution from neural crest1.34e-0792
regional part of brain2.76e-0746
brain6.31e-0747
future brain6.31e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:20705674..20705740,-&oldid=4274624"