FFCP PHASE1:Mm9::chr7:52960663..52960677,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13170 | |EntrezGene=13170 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3628 | |||
|TSSclassifier=NA | |||
|UniProt=Q3USN7,Q60925 | |UniProt=Q3USN7,Q60925 | ||
|association_with_transcript=46bp_to_NM_016974,uc009gws.2_5end | |||
|cluster_id=chr7:52960663..52960677,+ | |||
|description=CAGE_peak_6_at_Dbp_5end | |||
|id=chr7:52960663..52960677,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.26e-12,8;CL:0000333,1.40e-11,10;CL:0000095,1.40e-11,10;CL:0000243,1.40e-11,10;CL:0000123,1.40e-11,10;CL:0000125,1.40e-11,10;CL:0000030,1.40e-11,10;CL:0000339,1.40e-11,10;CL:0000128,1.06e-08,6;CL:0000126,1.06e-08,6;CL:0000127,1.06e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.62e-11!50;UBERON:0006238!4.62e-11!50;UBERON:0002616!1.35e-10!49;UBERON:0000033!6.16e-10!63;UBERON:0007023!3.07e-09!51;UBERON:0004111!9.75e-09!122;UBERON:0001049!2.73e-08!52;UBERON:0005068!2.73e-08!52;UBERON:0006241!2.73e-08!52;UBERON:0007135!2.73e-08!52;UBERON:0000073!4.92e-08!75;UBERON:0001016!4.92e-08!75;UBERON:0000025!1.23e-07!114;UBERON:0001017!1.39e-07!73;UBERON:0005743!1.39e-07!73;UBERON:0004121!2.32e-07!102;UBERON:0000924!2.32e-07!102;UBERON:0006601!2.32e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.17e-12,51;UBERON:0001016,7.34e-12,75;UBERON:0001017,1.98e-11,73;UBERON:0004121,2.28e-10,95;UBERON:0000924,2.28e-10,95;UBERON:0006601,2.28e-10,95;UBERON:0000073,3.58e-10,54;UBERON:0000955,1.39e-09,47;UBERON:0006238,1.39e-09,47;UBERON:0002616,7.47e-09,46;UBERON:0001049,3.85e-08,52;UBERON:0005068,3.85e-08,52;UBERON:0006241,3.85e-08,52;UBERON:0007135,3.85e-08,52;UBERON:0003528,6.50e-08,29;UBERON:0002791,6.50e-08,29;UBERON:0001893,6.50e-08,29;UBERON:0003080,1.81e-07,40;UBERON:0002950,3.28e-07,4;UBERON:0001891,3.28e-07,4;UBERON:0009616,3.28e-07,4;UBERON:0010286,3.28e-07,4;UBERON:0002780,9.30e-07,39;UBERON:0001890,9.30e-07,39;UBERON:0006240,9.30e-07,39 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0.233612640595526,0.387369970324729,0.140788722151667,0.234064526321993,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.473193248037357,0,0,2.29616883407888,0.397163804803541,0.261199789138935,0.95995453676044,1.14704640533585,0.57423196411502,0,0.646413698057667,1.14014051673824,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.608261587317087,0,1.56478268869608,2.61630187656536,1.5378032791413,2.52758868796568,1.25987779462826,2.87505128729943,0,0,0,0.257259436035947,0,0,0,0,0,0,0,2.6996991518442,0,4.9733608046227,7.19040265244171,14.9845139075406,0,0,0,0.285650984403804,0.883474163806454,0.122490799214954,0,0,8.8092704799511,4.46905683298157,6.45147439676223,0,0,0,2.79182999001381,3.37657566019008,6.41752640662602,0,0,0,0.227178579999552,1.36028808192214,2.6087803983151,0,6.11974200336975,1.07940638327563,0.649776417447669,5.37632264516803,3.7919993435573,0.340860645156116,0.519572009205738,0.35333957451034,0.704217098883403,0,0,0,0,0,0,1.94112595522402,0,3.85949561568544,0,0,0,0,1.05829836422134,2.01066546127481,0,1.87979163995885,0,0,0,0,0,2.04946557908083,0.628340120440365,0.766371165625774,0,0,0,1.9472783122627,5.49000723382352,0.125654352112864,2.43354048269187,1.79000820131231,1.66230435647648,0.648965052271031,0,0.124406970610093,1.0108910337347,0.631325567659422,0,0,0,0.30140963567143,0,0.12811372028485,0.187403449119458,3.3631438196072,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.972825714550269,0.438599962275997,0.658650345873152,0.134206418760372,2.3131894342054,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0,0.474529061544512,0,0,0.397912944082302,0,0.898819408654221,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.885660887877613,0.156998727841375,0,5.63259991465583,0,0,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0,0.252578877947112,0,0.482443521363367,7.02062122633098,0,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0.157635144106191,0.221464689648775,0.478364305972461,3.27726629431476,0.345369963731791,0.144649058581512,0,1.08781136763742,0,0.551873492609465,0.642202359951168,0.35163505977661,0.163934945376675,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,1.60660658210904,0.851640511249612,0.35613120733451,0,2.8044920905331,0,0,0.302323556964751,0,0,0.922305443831782,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.36175842301515,0,0.776152102696527,0.643011105094777,0.709360934569094,0.178368817602071,0.493647061806363,0.304464949114599,0,0,0.220528398054962,2.30840754118072,0,0.0603129249281559,0.119372344003136,0,0,1.48340241608408,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0,1.90934123603023,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0.404593039154462,0.743881101528023,0.26175594198403,0.129614973291793,0,2.25477175473676,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0.352071715937262,0.39061315453185,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0.116876902181569,4.0811469050738,0,0,0.167884616364078,1.15913756419314,0.187682475451182,1.09890974560359,0.857473516316263,0.501572104035363,2.25900737046827,0,0.572895513439397,1.20297227640581,0.685082519770642,2.2661816921691,2.02506750069542,3.60256962579376,0.906284817968409,4.14208249401456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.290692833264657,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | 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| ||
|short_description=p6@Dbp | |||
}} | }} |
Latest revision as of 21:41, 26 September 2015
Short description: | p6@Dbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Dbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:3628 |
Association with transcript: | 46bp_to_NM_016974, uc009gws.2_5end |
EntrezGene: | Dbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.26e-12 | 8 |
migratory neural crest cell | 1.40e-11 | 10 |
neuron associated cell | 1.40e-11 | 10 |
glial cell (sensu Vertebrata) | 1.40e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 1.40e-11 | 10 |
glial cell | 1.40e-11 | 10 |
glioblast | 1.40e-11 | 10 |
glioblast (sensu Vertebrata) | 1.40e-11 | 10 |
oligodendrocyte | 1.06e-08 | 6 |
macroglial cell | 1.06e-08 | 6 |
astrocyte | 1.06e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.17e-12 | 51 |
nervous system | 7.34e-12 | 75 |
central nervous system | 1.98e-11 | 73 |
ectoderm-derived structure | 2.28e-10 | 95 |
ectoderm | 2.28e-10 | 95 |
presumptive ectoderm | 2.28e-10 | 95 |
regional part of nervous system | 3.58e-10 | 54 |
brain | 1.39e-09 | 47 |
future brain | 1.39e-09 | 47 |
regional part of brain | 7.47e-09 | 46 |
neural tube | 3.85e-08 | 52 |
neural rod | 3.85e-08 | 52 |
future spinal cord | 3.85e-08 | 52 |
neural keel | 3.85e-08 | 52 |
brain grey matter | 6.50e-08 | 29 |
regional part of telencephalon | 6.50e-08 | 29 |
telencephalon | 6.50e-08 | 29 |
anterior neural tube | 1.81e-07 | 40 |
regional part of midbrain | 3.28e-07 | 4 |
midbrain | 3.28e-07 | 4 |
presumptive midbrain | 3.28e-07 | 4 |
midbrain neural tube | 3.28e-07 | 4 |
regional part of forebrain | 9.30e-07 | 39 |
forebrain | 9.30e-07 | 39 |
future forebrain | 9.30e-07 | 39 |