FFCP PHASE1:Mm9::chr1:184218142..184218158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67330 | |EntrezGene=67330 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3 | |MCL_coexpression_id=3 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-87bp_to_uc007dxy.1_5end | |association_with_transcript=-87bp_to_uc007dxy.1_5end | ||
|cluster_id=chr1:184218142..184218158,+ | |||
|description=CAGE_peak_5_at_1700047M11Rik_5end | |description=CAGE_peak_5_at_1700047M11Rik_5end | ||
|id=chr1:184218142..184218158,+ | |id=chr1:184218142..184218158,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.82e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.96e-12,3;DOID:4045,5.96e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0000955!2.92e-09!50;UBERON:0006238!2.92e-09!50;UBERON:0002616!1.44e-08!49;UBERON:0002298!4.05e-08!6;UBERON:0001049!1.58e-07!52;UBERON:0005068!1.58e-07!52;UBERON:0006241!1.58e-07!52;UBERON:0007135!1.58e-07!52;UBERON:0001017!1.69e-07!73;UBERON:0005743!1.69e-07!73;UBERON:0000073!4.34e-07!75;UBERON:0001016!4.34e-07!75 | |ontology_enrichment_uberon=UBERON:0000955!2.92e-09!50;UBERON:0006238!2.92e-09!50;UBERON:0002616!1.44e-08!49;UBERON:0002298!4.05e-08!6;UBERON:0001049!1.58e-07!52;UBERON:0005068!1.58e-07!52;UBERON:0006241!1.58e-07!52;UBERON:0007135!1.58e-07!52;UBERON:0001017!1.69e-07!73;UBERON:0005743!1.69e-07!73;UBERON:0000073!4.34e-07!75;UBERON:0001016!4.34e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.53e-11,54;UBERON:0004684,1.82e-10,3;UBERON:0002275,1.82e-10,3;UBERON:0003076,5.32e-10,12;UBERON:0003057,5.32e-10,12;UBERON:0004733,1.17e-09,6;UBERON:0004732,1.17e-09,6;UBERON:0002028,1.17e-09,6;UBERON:0007277,1.17e-09,6;UBERON:0001017,6.29e-09,73;UBERON:0001049,8.83e-09,52;UBERON:0005068,8.83e-09,52;UBERON:0006241,8.83e-09,52;UBERON:0007135,8.83e-09,52;UBERON:0001016,1.31e-08,75;UBERON:0001896,2.67e-08,2;UBERON:0002298,2.67e-08,2;UBERON:0005290,2.67e-08,2;UBERON:0010096,2.67e-08,2;UBERON:0002616,3.71e-07,46;UBERON:0000955,5.79e-07,47;UBERON:0006238,5.79e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7636447983192,9.37602413428561,18.3233310390829,34.7056577938298,32.1031377930469,33.0147040061184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.220868540951614,0,0,0,1.10115880999389,1.65993539510744,2.4577045320999,0,0,0,0.279182999001381,0.56276261003168,2.29197371665215,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0.883366073841574,1.45462575940567,0,1.46390398505774,2.93225389538837,0,0,0,0,2.54644086988199,2.74500361691176,0,0.695297280769106,1.53429274398198,2.0778804455956,3.24482526135515,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,2.10289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.744281895337007,1.24815069245824,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,5.61927064957272,4.57125577709592,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63563255026274,0.341741761595705,0.619160603889667,0.185194527369712,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.7636447983192,9.37602413428561,18.3233310390829,34.7056577938298,32.1031377930469,33.0147040061184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.220868540951614,0,0,0,1.10115880999389,1.65993539510744,2.4577045320999,0,0,0,0.279182999001381,0.56276261003168,2.29197371665215,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0.883366073841574,1.45462575940567,0,1.46390398505774,2.93225389538837,0,0,0,0,2.54644086988199,2.74500361691176,0,0.695297280769106,1.53429274398198,2.0778804455956,3.24482526135515,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,2.10289948564127,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0.744281895337007,1.24815069245824,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,5.61927064957272,4.57125577709592,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63563255026274,0.341741761595705,0.619160603889667,0.185194527369712,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.463735671240843 | ||
|short_description=p5@1700047M11Rik | |short_description=p5@1700047M11Rik | ||
}} | }} |
Latest revision as of 22:46, 26 September 2015
Short description: | p5@1700047M11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_1700047M11Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -87bp_to_uc007dxy.1_5end |
EntrezGene: | 1700047M11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.82e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.53e-11 | 54 |
raphe nuclei | 1.82e-10 | 3 |
reticular formation | 1.82e-10 | 3 |
posterior neural tube | 5.32e-10 | 12 |
chordal neural plate | 5.32e-10 | 12 |
segmental subdivision of hindbrain | 1.17e-09 | 6 |
segmental subdivision of nervous system | 1.17e-09 | 6 |
hindbrain | 1.17e-09 | 6 |
presumptive hindbrain | 1.17e-09 | 6 |
central nervous system | 6.29e-09 | 73 |
neural tube | 8.83e-09 | 52 |
neural rod | 8.83e-09 | 52 |
future spinal cord | 8.83e-09 | 52 |
neural keel | 8.83e-09 | 52 |
nervous system | 1.31e-08 | 75 |
medulla oblongata | 2.67e-08 | 2 |
brainstem | 2.67e-08 | 2 |
myelencephalon | 2.67e-08 | 2 |
future myelencephalon | 2.67e-08 | 2 |
regional part of brain | 3.71e-07 | 46 |
brain | 5.79e-07 | 47 |
future brain | 5.79e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.96e-12 | 3 |
muscle cancer | 5.96e-12 | 3 |