FFCP PHASE1:Mm9::chr4:44180760..44180772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73469 | |EntrezGene=73469 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENSMUST00000129621_5end | |||
|cluster_id=chr4:44180760..44180772,- | |||
|description=CAGE_peak_10_at_Rnf38_5end | |||
|id=chr4:44180760..44180772,- | |||
|ontology_enrichment_celltype=CL:0000542!5.49e-07!13;CL:0000051!5.49e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.12e-11,13;CL:0000051,2.12e-11,13;CL:0000838,2.26e-10,12;CL:0000084,9.13e-10,11;CL:0000827,9.13e-10,11;CL:0000738,5.03e-08,17;CL:0002087,5.03e-08,17;CL:0000791,9.58e-08,9;CL:0000789,9.58e-08,9;CL:0002420,9.58e-08,9;CL:0002419,9.58e-08,9;CL:0000790,9.58e-08,9;CL:0000988,1.19e-07,32;CL:0002032,1.19e-07,32;CL:0000037,1.19e-07,32;CL:0000837,1.19e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.48e-10!29;UBERON:0002370!1.37e-08!23;UBERON:0000974!1.37e-08!23;UBERON:0004807!1.37e-08!23;UBERON:0005058!1.37e-08!23;UBERON:0003351!1.37e-08!23;UBERON:0009113!1.37e-08!23;UBERON:0003295!1.37e-08!23;UBERON:0009722!1.37e-08!23;UBERON:0005562!1.37e-08!23;UBERON:0007690!1.37e-08!23;UBERON:0006562!1.10e-07!24;UBERON:0003408!1.10e-07!24;UBERON:0001557!1.10e-07!24;UBERON:0001042!1.10e-07!24;UBERON:0008814!1.10e-07!24;UBERON:0009145!1.10e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.97e-15,29;UBERON:0005057,7.97e-15,29;UBERON:0002370,2.44e-14,23;UBERON:0000974,2.44e-14,23;UBERON:0004807,2.44e-14,23;UBERON:0005058,2.44e-14,23;UBERON:0003351,2.44e-14,23;UBERON:0009113,2.44e-14,23;UBERON:0003295,2.44e-14,23;UBERON:0009722,2.44e-14,23;UBERON:0005562,2.44e-14,23;UBERON:0007690,2.44e-14,23;UBERON:0006562,1.60e-13,24;UBERON:0003408,1.60e-13,24;UBERON:0001557,1.60e-13,24;UBERON:0001042,1.60e-13,24;UBERON:0008814,1.60e-13,24;UBERON:0009145,1.60e-13,24;UBERON:0000072,1.89e-11,27;UBERON:0000077,3.02e-11,35;UBERON:0002193,8.29e-11,48;UBERON:0002405,8.29e-11,48;UBERON:0002390,1.10e-10,45;UBERON:0003061,1.10e-10,45;UBERON:0007811,1.56e-10,36;UBERON:0000153,6.60e-08,43;UBERON:0003929,4.49e-07,55 | |||
|phase1_expression=1.12104192973356,0,1.81999695755814,0.60492842261366,0,1.17515490338323,0.233612640595526,1.80772652818207,2.67498572088167,4.91535505276186,0.856089841127525,0.239316476986009,1.88320802924326,2.62261207256992,0,0.202475267389826,0,0.946386496074713,1.23402990245165,0,1.44573593256819,1.39007331681239,2.35079810225042,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0.866554859253824,0.664938581433969,1.22501613757421,0.837063261473815,0.7813353445238,0.523523743973798,1.76469446409304,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0,0,0.194429899074283,0,0,1.00669563634642,5.80289713609076,4.7053131879945,0,0.286533439938757,0,1.01158230429799,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0.622137673850866,0.405017814995072,0.210324961351382,0.571301968807607,0,1.46988959057945,1.34183659425531,0.919218786610021,0,0,0,0.395658863190582,0.274462930807229,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0.377857800533928,0.869593466105033,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,1.40843419776681,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.5709193985953,2.84831672011889,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.23517741427141,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,1.45462575940567,1.86391761218122,0,0,0.255457055208591,2.99537811264801,0.599902730993408,3.17675567682662,0.149790639404823,0,1.13088916901578,0.173824320192276,0.255715457330331,0,0,1.01839363850316,0.870848794270651,1.26361379216837,0,0.780722657776222,0.689706313300419,0.900310649026746,0.90422890701429,1.29269348387523,0.768682321709099,0.468508622798644,0,0.215567992932842,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,0.696504333044333,0,0.199034266818493,2.1066395619397,0.257347907114715,2.84163499395593,1.44988040774851,1.17263029990548,0.36012412292203,0,0.787056926989615,1.07986979021165,0.232533944750408,0.268273401399619,0.700592054203017,0.16455984991348,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,0,0.720332286654991,0,0,1.70630600428187,0.232236671860439,1.15980715189884,0.403367049246685,0.444756087689741,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.758671603812327,0.571242563048644,0,0.814605311381257,0,0.841629838683823,0.442655759869801,0.295220295959204,0.470996183524124,0.123397163921801,0.296452627087149,1.00107063429656,0.982794975566015,0.899448449539415,1.01430060694251,0.482354319504834,0.50925170356284,0,0.648540907100142,0,1.43768206527355,0,0,0,0.179397413521912,0.482443521363367,0.554259570499814,1.13694847062291,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.476087281772027,0.390267295715598,0.472905432318573,0.664394068946325,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0.551873492609465,0,0.117211686592203,0.163934945376675,0,0.94652465824877,0.780877488593277,0.646270193198397,0.477937595905104,1.11399337041197,0.283076530788832,0.809621403349789,0.876767573733936,0,0.321321316421807,0.567760340833074,0.712262414669021,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.754420319023592,0,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0,0,1.03135543248187,0,0.720244376125241,1.03486947026204,0.214337035031592,0.886701168211368,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0.65954501176592,0.645857706783622,0.965006798850494,0.835606408021955,0.164140899745061,0.291480836629851,0.18542530201051,1.19609616558497,0.412773735926445,0.925972636848558,1.50694765603753,2.32380187125743,0.686334519619568,4.75939603982795,4.3384950220334,4.14599921413271,0,0.949007980743406,0.813277868507395,0.324016022465404,0.209088296014469,0.655087691238533,0.539457385539283,0.826534557253359,0,0.129614973291793,0,10.1464728963154,1.19613236835183,0.992750942742586,0.777804753376191,0.258319646955462,0.844780627453891,0.704143431874524,1.0416350787516,1.57289016638566,2.89900944991207,7.77681016896237,0.948033361884535,2.02725215290164,1.43795340030758,0.77952493786677,1.25318686967237,2.18549490259391,2.40390899039938,2.95379054349154,2.42319479875554,2.43861781295999,1.61321896218945,2.92373642219257,2.69393156592922,2.68816875017609,0,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,1.03787347584177,0.399024873401031,0.512200817262403,0.972426868273176,1.04806581313991,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0.50695859978048,0.565879024158229,1.12369808963859,0.448176066834085,0.574354689556133,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.147198920134397,0,0.70990322463735,0,0,0.564656282491984,0.25384382367503,0.365855945745545,0.526139422875686,0.543216455383447,0.56114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| |phase1_expression=1.12104192973356,0,1.81999695755814,0.60492842261366,0,1.17515490338323,0.233612640595526,1.80772652818207,2.67498572088167,4.91535505276186,0.856089841127525,0.239316476986009,1.88320802924326,2.62261207256992,0,0.202475267389826,0,0.946386496074713,1.23402990245165,0,1.44573593256819,1.39007331681239,2.35079810225042,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0.866554859253824,0.664938581433969,1.22501613757421,0.837063261473815,0.7813353445238,0.523523743973798,1.76469446409304,0,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0,0,0.194429899074283,0,0,1.00669563634642,5.80289713609076,4.7053131879945,0,0.286533439938757,0,1.01158230429799,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0.622137673850866,0.405017814995072,0.210324961351382,0.571301968807607,0,1.46988959057945,1.34183659425531,0.919218786610021,0,0,0,0.395658863190582,0.274462930807229,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0.377857800533928,0.869593466105033,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,1.40843419776681,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.5709193985953,2.84831672011889,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.23517741427141,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,1.45462575940567,1.86391761218122,0,0,0.255457055208591,2.99537811264801,0.599902730993408,3.17675567682662,0.149790639404823,0,1.13088916901578,0.173824320192276,0.255715457330331,0,0,1.01839363850316,0.870848794270651,1.26361379216837,0,0.780722657776222,0.689706313300419,0.900310649026746,0.90422890701429,1.29269348387523,0.768682321709099,0.468508622798644,0,0.215567992932842,0.945530400839096,0.879755620819744,0.876782929710299,0.834141747676794,0.696504333044333,0,0.199034266818493,2.1066395619397,0.257347907114715,2.84163499395593,1.44988040774851,1.17263029990548,0.36012412292203,0,0.787056926989615,1.07986979021165,0.232533944750408,0.268273401399619,0.700592054203017,0.16455984991348,0.32833492815819,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,0,0.720332286654991,0,0,1.70630600428187,0.232236671860439,1.15980715189884,0.403367049246685,0.444756087689741,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.758671603812327,0.571242563048644,0,0.814605311381257,0,0.841629838683823,0.442655759869801,0.295220295959204,0.470996183524124,0.123397163921801,0.296452627087149,1.00107063429656,0.982794975566015,0.899448449539415,1.01430060694251,0.482354319504834,0.50925170356284,0,0.648540907100142,0,1.43768206527355,0,0,0,0.179397413521912,0.482443521363367,0.554259570499814,1.13694847062291,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.476087281772027,0.390267295715598,0.472905432318573,0.664394068946325,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0.551873492609465,0,0.117211686592203,0.163934945376675,0,0.94652465824877,0.780877488593277,0.646270193198397,0.477937595905104,1.11399337041197,0.283076530788832,0.809621403349789,0.876767573733936,0,0.321321316421807,0.567760340833074,0.712262414669021,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.754420319023592,0,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0,0,1.03135543248187,0,0.720244376125241,1.03486947026204,0.214337035031592,0.886701168211368,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0.65954501176592,0.645857706783622,0.965006798850494,0.835606408021955,0.164140899745061,0.291480836629851,0.18542530201051,1.19609616558497,0.412773735926445,0.925972636848558,1.50694765603753,2.32380187125743,0.686334519619568,4.75939603982795,4.3384950220334,4.14599921413271,0,0.949007980743406,0.813277868507395,0.324016022465404,0.209088296014469,0.655087691238533,0.539457385539283,0.826534557253359,0,0.129614973291793,0,10.1464728963154,1.19613236835183,0.992750942742586,0.777804753376191,0.258319646955462,0.844780627453891,0.704143431874524,1.0416350787516,1.57289016638566,2.89900944991207,7.77681016896237,0.948033361884535,2.02725215290164,1.43795340030758,0.77952493786677,1.25318686967237,2.18549490259391,2.40390899039938,2.95379054349154,2.42319479875554,2.43861781295999,1.61321896218945,2.92373642219257,2.69393156592922,2.68816875017609,0,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.549454872801795,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,1.03787347584177,0.399024873401031,0.512200817262403,0.972426868273176,1.04806581313991,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0.50695859978048,0.565879024158229,1.12369808963859,0.448176066834085,0.574354689556133,0.476293691283074,0.811190281613988,1.15745532278223,0.412085900803307,0.147198920134397,0,0.70990322463735,0,0,0.564656282491984,0.25384382367503,0.365855945745545,0.526139422875686,0.543216455383447,0.56114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| ||
|short_description=p10@Rnf38 | |||
}} | }} |
Latest revision as of 00:36, 27 September 2015
Short description: | p10@Rnf38 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Rnf38_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 21bp_to_ENSMUST00000129621_5end |
EntrezGene: | Rnf38 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.12e-11 | 13 |
common lymphoid progenitor | 2.12e-11 | 13 |
lymphoid lineage restricted progenitor cell | 2.26e-10 | 12 |
T cell | 9.13e-10 | 11 |
pro-T cell | 9.13e-10 | 11 |
leukocyte | 5.03e-08 | 17 |
nongranular leukocyte | 5.03e-08 | 17 |
mature alpha-beta T cell | 9.58e-08 | 9 |
alpha-beta T cell | 9.58e-08 | 9 |
immature T cell | 9.58e-08 | 9 |
mature T cell | 9.58e-08 | 9 |
immature alpha-beta T cell | 9.58e-08 | 9 |
hematopoietic cell | 1.19e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.19e-07 | 32 |
hematopoietic stem cell | 1.19e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.19e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 7.97e-15 | 29 |
immune organ | 7.97e-15 | 29 |
thymus | 2.44e-14 | 23 |
neck | 2.44e-14 | 23 |
respiratory system epithelium | 2.44e-14 | 23 |
hemolymphoid system gland | 2.44e-14 | 23 |
pharyngeal epithelium | 2.44e-14 | 23 |
thymic region | 2.44e-14 | 23 |
pharyngeal gland | 2.44e-14 | 23 |
entire pharyngeal arch endoderm | 2.44e-14 | 23 |
thymus primordium | 2.44e-14 | 23 |
early pharyngeal endoderm | 2.44e-14 | 23 |
pharynx | 1.60e-13 | 24 |
gland of gut | 1.60e-13 | 24 |
upper respiratory tract | 1.60e-13 | 24 |
chordate pharynx | 1.60e-13 | 24 |
pharyngeal arch system | 1.60e-13 | 24 |
pharyngeal region of foregut | 1.60e-13 | 24 |
segment of respiratory tract | 1.89e-11 | 27 |
mixed endoderm/mesoderm-derived structure | 3.02e-11 | 35 |
hemolymphoid system | 8.29e-11 | 48 |
immune system | 8.29e-11 | 48 |
hematopoietic system | 1.10e-10 | 45 |
blood island | 1.10e-10 | 45 |
craniocervical region | 1.56e-10 | 36 |
anterior region of body | 6.60e-08 | 43 |
gut epithelium | 4.49e-07 | 55 |