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FFCP PHASE1:Mm9::chr9:68501522..68501538,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19883
|EntrezGene=19883
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=P51448
|UniProt=P51448
|association_with_transcript=-54bp_to_ENSMUST00000034766,ENSMUST00000140351_5end
|association_with_transcript=-54bp_to_ENSMUST00000034766,ENSMUST00000140351_5end
|cluster_id=chr9:68501522..68501538,+
|description=CAGE_peak_4_at_Rora_5end
|description=CAGE_peak_4_at_Rora_5end
|id=chr9:68501522..68501538,+
|id=chr9:68501522..68501538,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!7.46e-17!71;UBERON:0003075!7.46e-17!71;UBERON:0007284!7.46e-17!71;UBERON:0004121!1.49e-15!102;UBERON:0000924!1.49e-15!102;UBERON:0006601!1.49e-15!102;UBERON:0001017!7.07e-15!73;UBERON:0005743!7.07e-15!73;UBERON:0000073!7.83e-14!75;UBERON:0001016!7.83e-14!75;UBERON:0000033!8.00e-12!63;UBERON:0000955!4.80e-11!50;UBERON:0006238!4.80e-11!50;UBERON:0001049!1.06e-10!52;UBERON:0005068!1.06e-10!52;UBERON:0006241!1.06e-10!52;UBERON:0007135!1.06e-10!52;UBERON:0002616!1.69e-10!49;UBERON:0003056!2.32e-08!49;UBERON:0000468!5.60e-08!333;UBERON:0002021!1.49e-07!10;UBERON:0000411!1.49e-07!10;UBERON:0001950!1.49e-07!10;UBERON:0000025!1.87e-07!114;UBERON:0003080!3.06e-07!40;UBERON:0002780!9.76e-07!39;UBERON:0001890!9.76e-07!39;UBERON:0006240!9.76e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-14,73;UBERON:0010314,1.30e-14,92;UBERON:0001016,9.26e-14,75;UBERON:0002346,3.66e-13,64;UBERON:0003075,3.66e-13,64;UBERON:0007284,3.66e-13,64;UBERON:0004121,1.96e-11,95;UBERON:0000924,1.96e-11,95;UBERON:0006601,1.96e-11,95;UBERON:0000073,2.07e-11,54;UBERON:0010371,1.16e-10,73;UBERON:0001049,2.04e-10,52;UBERON:0005068,2.04e-10,52;UBERON:0006241,2.04e-10,52;UBERON:0007135,2.04e-10,52;UBERON:0000955,3.62e-09,47;UBERON:0006238,3.62e-09,47;UBERON:0002021,7.33e-09,10;UBERON:0000411,7.33e-09,10;UBERON:0001950,7.33e-09,10;UBERON:0002616,1.38e-08,46;UBERON:0003056,9.74e-08,49
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,3.24406179902447,0.183546752161682,1.56478268869608,0.436050312760893,0.439372365468944,0.972149495371417,0.839918529752175,0,0,0,0,0.257259436035947,0.573066879877513,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0.889294796111139,0.899899717281399,1.97773272513395,1.4209602298922,1.19840044207362,1.15265491596466,0.103689612308478,0.405017814995072,0.420649922702764,1.71390590642282,2.20868540951614,0.367472397644862,0.0958454710182364,0,4.40463523997555,7.15049093277051,4.91540906419979,0.923204014111357,0.731901148819277,1.56274011167028,3.35019598801657,3.37657566019008,3.36156145108982,1.47314292736834,1.70846016958924,1.67759501242771,0.151452386666368,0.0755715601067855,5.2175607966302,0,0,0,0.649776417447669,0.448026887097336,0.842666520790511,0.681721290312231,1.29893002301434,0.70667914902068,1.83096445709685,6.41632387071589,12.7402619853323,0,0,0,0,0.79928715803342,0.258937883647172,5.04703272820404,2.08182392119363,7.61163695780353,6.45723392316964,9.49552635481522,6.23220147819235,4.14699751387929,0.494389935468748,0.289198713839823,0,2.26473589926373,1.98757366614354,1.45462575940567,0,24.0080253549469,35.8153868651008,0.510914110417183,0,0,0,10.1857634795279,5.94750783664214,0.879580464790051,5.38855392596057,8.69432554923124,8.3115217823824,7.78758062725237,1.01839363850316,0.746441823660558,1.0108910337347,2.94618598241064,0.650602214813519,0.229902104433473,1.44049703844279,2.10986744970001,1.49680298132921,2.17793324484245,1.40552586839593,4.9153640440413,0.431135985865684,0.756424320671277,2.28736461413134,0.219195732427575,1.11218899690239,1.39300866608867,1.23469281844766,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,1.23413690309903,0.232533944750408,0.536546802799238,1.05088808130453,0.658239399653922,4.10418660197738,2.75633952455909,3.07019973593198,2.19550115291051,2.81833479396781,1.89260953707715,0.411618449517138,0.330418782983798,0,1.70630600428187,1.85789337488351,1.03093969057675,1.21010114774006,0.667134131534611,0.380451252225118,0,0,1.25667604400135,0.397912944082302,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,1.5994791765362,3.38123207019241,1.22190796707189,0.969762435838129,0.701358198903186,1.64414996523069,1.47610147979602,1.41298855057237,0.493588655687202,0,0.166845105716094,0.982794975566015,0.899448449539415,1.01430060694251,0.964708639009667,1.2731292589071,1.43848068725405,0,0.823684239564244,2.87536413054709,0.744281895337007,2.18426371180192,0.505157755894224,0.358794827043824,0,0,1.13694847062291,1.14075483509418,1.18821560042632,0.938760993154008,1.84256883185997,0.714130922658041,1.56106918286239,0.945810864637146,1.32878813789265,2.39182152986231,1.47476983244164,0.172684981865896,1.01254341007058,0,0,0,0.275936746304732,5.13761887960934,7.61875962849321,0.327869890753351,5.80683132570058,4.41711507182759,2.73307121007647,6.24727853425117,1.91175038362042,2.67358408898873,3.96307143104365,2.02405350837447,1.16902343164525,1.58115111178609,8.67567554338879,1.56134093729095,0.890328018336276,0.977321756121456,4.94910368917606,0,0.242780636154981,0.604647113929502,0.754420319023592,0,2.15204603560749,0.775284879504663,0.727067458955011,2.49548164869305,2.21225730555071,1.05418608574999,0,5.7874732978144,1.98067203434441,0.517434735131018,2.35770738534752,1.59606210278046,1.96205699362278,1.64549020602121,0.608929898229199,0,0.63549621259146,0,0.98931751764888,0.322928853391811,0.361877549568935,0.596861720015682,0.164140899745061,0.291480836629851,8.90041449650446,0.170870880797853,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0,0,0.954670618015114,0,2.23651413839534,1.40406943068342,0.627264888043406,1.31017538247707,0.944050424693745,1.32245529160537,0.523511883968059,0.648074866458964,0,0,0.747582730219894,0.992750942742586,0.777804753376191,0.904118764344118,0.675824501963113,0.352071715937262,1.0416350787516,0.838874755405687,0,0.864090018773596,0,1.01362607645082,0.513554785824136,0.389762468933385,0.537080087002444,0,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.192423683280659,0.233753804363138,0.680191150845634,0.221985953374065,0.269141569828427,0,0.772758376128762,0.187682475451182,1.83151624267265,0.857473516316263,0,4.51801474093653,9.66682996665071,6.87474616127276,9.79563139359019,12.3314853558716,9.06472676867641,7.42524750254986,5.85417564191487,5.89085131679466,13.4617681055473,0.103787347584177,1.19707462020309,1.02440163452481,0.486213434136588,0.209613162627982,0.551530525350042,1.33348036680969,1.85431551515005,2.24643446714271,2.27427490587418,2.5347929989024,2.82939512079114,2.52832070168682,1.53660365771686,1.4358867238903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|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,3.24406179902447,0.183546752161682,1.56478268869608,0.436050312760893,0.439372365468944,0.972149495371417,0.839918529752175,0,0,0,0,0.257259436035947,0.573066879877513,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0.889294796111139,0.899899717281399,1.97773272513395,1.4209602298922,1.19840044207362,1.15265491596466,0.103689612308478,0.405017814995072,0.420649922702764,1.71390590642282,2.20868540951614,0.367472397644862,0.0958454710182364,0,4.40463523997555,7.15049093277051,4.91540906419979,0.923204014111357,0.731901148819277,1.56274011167028,3.35019598801657,3.37657566019008,3.36156145108982,1.47314292736834,1.70846016958924,1.67759501242771,0.151452386666368,0.0755715601067855,5.2175607966302,0,0,0,0.649776417447669,0.448026887097336,0.842666520790511,0.681721290312231,1.29893002301434,0.70667914902068,1.83096445709685,6.41632387071589,12.7402619853323,0,0,0,0,0.79928715803342,0.258937883647172,5.04703272820404,2.08182392119363,7.61163695780353,6.45723392316964,9.49552635481522,6.23220147819235,4.14699751387929,0.494389935468748,0.289198713839823,0,2.26473589926373,1.98757366614354,1.45462575940567,0,24.0080253549469,35.8153868651008,0.510914110417183,0,0,0,10.1857634795279,5.94750783664214,0.879580464790051,5.38855392596057,8.69432554923124,8.3115217823824,7.78758062725237,1.01839363850316,0.746441823660558,1.0108910337347,2.94618598241064,0.650602214813519,0.229902104433473,1.44049703844279,2.10986744970001,1.49680298132921,2.17793324484245,1.40552586839593,4.9153640440413,0.431135985865684,0.756424320671277,2.28736461413134,0.219195732427575,1.11218899690239,1.39300866608867,1.23469281844766,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.393528463494808,1.23413690309903,0.232533944750408,0.536546802799238,1.05088808130453,0.658239399653922,4.10418660197738,2.75633952455909,3.07019973593198,2.19550115291051,2.81833479396781,1.89260953707715,0.411618449517138,0.330418782983798,0,1.70630600428187,1.85789337488351,1.03093969057675,1.21010114774006,0.667134131534611,0.380451252225118,0,0,1.25667604400135,0.397912944082302,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,0.189667900953082,1.5994791765362,3.38123207019241,1.22190796707189,0.969762435838129,0.701358198903186,1.64414996523069,1.47610147979602,1.41298855057237,0.493588655687202,0,0.166845105716094,0.982794975566015,0.899448449539415,1.01430060694251,0.964708639009667,1.2731292589071,1.43848068725405,0,0.823684239564244,2.87536413054709,0.744281895337007,2.18426371180192,0.505157755894224,0.358794827043824,0,0,1.13694847062291,1.14075483509418,1.18821560042632,0.938760993154008,1.84256883185997,0.714130922658041,1.56106918286239,0.945810864637146,1.32878813789265,2.39182152986231,1.47476983244164,0.172684981865896,1.01254341007058,0,0,0,0.275936746304732,5.13761887960934,7.61875962849321,0.327869890753351,5.80683132570058,4.41711507182759,2.73307121007647,6.24727853425117,1.91175038362042,2.67358408898873,3.96307143104365,2.02405350837447,1.16902343164525,1.58115111178609,8.67567554338879,1.56134093729095,0.890328018336276,0.977321756121456,4.94910368917606,0,0.242780636154981,0.604647113929502,0.754420319023592,0,2.15204603560749,0.775284879504663,0.727067458955011,2.49548164869305,2.21225730555071,1.05418608574999,0,5.7874732978144,1.98067203434441,0.517434735131018,2.35770738534752,1.59606210278046,1.96205699362278,1.64549020602121,0.608929898229199,0,0.63549621259146,0,0.98931751764888,0.322928853391811,0.361877549568935,0.596861720015682,0.164140899745061,0.291480836629851,8.90041449650446,0.170870880797853,0.619160603889667,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0.169978429993855,0,0,0.954670618015114,0,2.23651413839534,1.40406943068342,0.627264888043406,1.31017538247707,0.944050424693745,1.32245529160537,0.523511883968059,0.648074866458964,0,0,0.747582730219894,0.992750942742586,0.777804753376191,0.904118764344118,0.675824501963113,0.352071715937262,1.0416350787516,0.838874755405687,0,0.864090018773596,0,1.01362607645082,0.513554785824136,0.389762468933385,0.537080087002444,0,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.192423683280659,0.233753804363138,0.680191150845634,0.221985953374065,0.269141569828427,0,0.772758376128762,0.187682475451182,1.83151624267265,0.857473516316263,0,4.51801474093653,9.66682996665071,6.87474616127276,9.79563139359019,12.3314853558716,9.06472676867641,7.42524750254986,5.85417564191487,5.89085131679466,13.4617681055473,0.103787347584177,1.19707462020309,1.02440163452481,0.486213434136588,0.209613162627982,0.551530525350042,1.33348036680969,1.85431551515005,2.24643446714271,2.27427490587418,2.5347929989024,2.82939512079114,2.52832070168682,1.53660365771686,1.4358867238903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|short_description=p4@Rora
|short_description=p4@Rora
}}
}}

Latest revision as of 01:27, 27 September 2015

Short description:p4@Rora
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rora_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: -54bp_to_ENSMUST00000034766, ENSMUST00000140351_5end
EntrezGene:Rora
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rora

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D75.05
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F59.50
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.01
cerebellum, neonate N30.CNhs11135.1395-42I235.82
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A37.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B43.48





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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