FFCP PHASE1:Mm9::chr7:82756678..82756688,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=75547|HGNC=|MCL_coexpression_id=21|UniProt=Q3TR80,Q3T998|association_with_transcript=-30bp_to_ENSMUST00000151560,uc009hws.1,uc009hwt.1_5end|description=CAGE_peak_27_at_Akap13_5end|id=chr7:82756678..82756688,+|ontology_enrichment_celltype=CL:0000791!4.36e-22!9;CL:0000789!4.36e-22!9;CL:0002420!4.36e-22!9;CL:0002419!4.36e-22!9;CL:0000790!4.36e-22!9;CL:0000838!6.73e-20!12;CL:0000624!1.11e-19!8;CL:0000542!3.42e-18!13;CL:0000051!3.42e-18!13;CL:0000084!1.02e-17!11;CL:0000827!1.02e-17!11;CL:0000893!7.88e-15!6;CL:0002489!7.88e-15!6;CL:0000898!7.88e-15!6;CL:0000809!7.88e-15!6;CL:0000810!7.88e-15!6;CL:0000895!7.88e-15!6;CL:0000808!7.88e-15!6;CL:0000894!7.88e-15!6;CL:0000806!7.88e-15!6;CL:0000807!7.88e-15!6;CL:0000805!7.88e-15!6;CL:0002425!7.88e-15!6;CL:0002436!7.88e-15!6;CL:0002427!7.88e-15!6;CL:0002428!7.88e-15!6;CL:0002429!7.88e-15!6;CL:0002433!7.88e-15!6;CL:0002431!7.88e-15!6;CL:0002432!7.88e-15!6;CL:0000738!2.22e-13!17;CL:0002087!2.22e-13!17;CL:0002031!7.66e-12!25;CL:0000988!4.34e-10!32;CL:0002032!4.34e-10!32;CL:0000037!4.34e-10!32;CL:0000566!4.34e-10!32;CL:0000837!4.34e-10!32|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-59,9;CL:0000789,2.18e-59,9;CL:0002420,2.18e-59,9;CL:0002419,2.18e-59,9;CL:0000790,2.18e-59,9;CL:0000624,3.83e-49,8;CL:0000084,1.18e-48,11;CL:0000827,1.18e-48,11;CL:0000838,1.26e-44,12;CL:0000542,3.24e-41,13;CL:0000051,3.24e-41,13;CL:0000738,1.40e-31,17;CL:0002087,1.40e-31,17;CL:0000893,3.35e-29,6;CL:0002489,3.35e-29,6;CL:0000898,3.35e-29,6;CL:0000809,3.35e-29,6;CL:0000810,3.35e-29,6;CL:0000895,3.35e-29,6;CL:0000808,3.35e-29,6;CL:0000894,3.35e-29,6;CL:0000806,3.35e-29,6;CL:0000807,3.35e-29,6;CL:0000805,3.35e-29,6;CL:0002425,3.35e-29,6;CL:0002436,3.35e-29,6;CL:0002427,3.35e-29,6;CL:0002428,3.35e-29,6;CL:0002429,3.35e-29,6;CL:0002433,3.35e-29,6;CL:0002431,3.35e-29,6;CL:0002432,3.35e-29,6;CL:0002031,1.57e-21,25;CL:0000988,7.62e-17,32;CL:0002032,7.62e-17,32;CL:0000037,7.62e-17,32;CL:0000837,7.62e-17,32;CL:0000815,1.20e-12,1;CL:0000792,1.20e-12,1;CL:0000625,2.01e-12,1;CL:0002320,1.00e-11,46;CL:0000134,1.00e-11,46;CL:0000219,5.55e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!4.73e-16!24;UBERON:0004177!1.77e-14!29;UBERON:0002370!2.80e-14!23;UBERON:0000974!2.80e-14!23;UBERON:0004807!2.80e-14!23;UBERON:0005058!2.80e-14!23;UBERON:0003351!2.80e-14!23;UBERON:0009113!2.80e-14!23;UBERON:0003295!2.80e-14!23;UBERON:0009722!2.80e-14!23;UBERON:0005562!2.80e-14!23;UBERON:0007690!2.80e-14!23;UBERON:0006562!1.46e-13!24;UBERON:0001557!1.46e-13!24;UBERON:0001042!1.46e-13!24;UBERON:0008814!1.46e-13!24;UBERON:0009145!1.46e-13!24;UBERON:0000072!9.95e-12!27;UBERON:0002193!3.01e-11!48;UBERON:0002390!1.17e-10!45;UBERON:0003061!1.17e-10!45;UBERON:0000063!7.26e-10!35;UBERON:0001004!4.72e-09!42;UBERON:0003081!2.30e-08!88;UBERON:0000065!6.43e-08!41;UBERON:0005057!7.38e-08!51;UBERON:0002405!2.35e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0001044,7.11e-12,1;UBERON:0001736,7.11e-12,1;UBERON:0003293,7.11e-12,1;UBERON:0003294,7.11e-12,1;UBERON:0001829,7.11e-12,1;UBERON:0010047,7.11e-12,1;UBERON:0000167,7.11e-12,1;UBERON:0006298,7.11e-12,1;UBERON:0002384,1.00e-11,46;UBERON:0003408,1.78e-11,24;UBERON:0002370,5.79e-08,23;UBERON:0000974,5.79e-08,23;UBERON:0004807,5.79e-08,23;UBERON:0005058,5.79e-08,23;UBERON:0003351,5.79e-08,23;UBERON:0009113,5.79e-08,23;UBERON:0003295,5.79e-08,23;UBERON:0009722,5.79e-08,23;UBERON:0005562,5.79e-08,23;UBERON:0007690,5.79e-08,23;UBERON:0007811,1.03e-07,36;UBERON:0006562,1.20e-07,24;UBERON:0001557,1.20e-07,24;UBERON:0001042,1.20e-07,24;UBERON:0008814,1.20e-07,24;UBERON:0009145,1.20e-07,24;UBERON:0000072,7.81e-07,27|phase1_expression=0,0,0,0,0,0,0,6.45616617207881,1.83025338797167,1.40438715793196,0.513653904676515,0.159544317990673,1.71200729931206,1.48614684112296,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.671130424230945,4.35217285206807,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p27@Akap13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75547 | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TR80,Q3T998 | |||
|association_with_transcript=-30bp_to_ENSMUST00000151560,uc009hws.1,uc009hwt.1_5end | |||
|cluster_id=chr7:82756678..82756688,+ | |||
|description=CAGE_peak_27_at_Akap13_5end | |||
|id=chr7:82756678..82756688,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.36e-22!9;CL:0000789!4.36e-22!9;CL:0002420!4.36e-22!9;CL:0002419!4.36e-22!9;CL:0000790!4.36e-22!9;CL:0000838!6.73e-20!12;CL:0000624!1.11e-19!8;CL:0000542!3.42e-18!13;CL:0000051!3.42e-18!13;CL:0000084!1.02e-17!11;CL:0000827!1.02e-17!11;CL:0000893!7.88e-15!6;CL:0002489!7.88e-15!6;CL:0000898!7.88e-15!6;CL:0000809!7.88e-15!6;CL:0000810!7.88e-15!6;CL:0000895!7.88e-15!6;CL:0000808!7.88e-15!6;CL:0000894!7.88e-15!6;CL:0000806!7.88e-15!6;CL:0000807!7.88e-15!6;CL:0000805!7.88e-15!6;CL:0002425!7.88e-15!6;CL:0002436!7.88e-15!6;CL:0002427!7.88e-15!6;CL:0002428!7.88e-15!6;CL:0002429!7.88e-15!6;CL:0002433!7.88e-15!6;CL:0002431!7.88e-15!6;CL:0002432!7.88e-15!6;CL:0000738!2.22e-13!17;CL:0002087!2.22e-13!17;CL:0002031!7.66e-12!25;CL:0000988!4.34e-10!32;CL:0002032!4.34e-10!32;CL:0000037!4.34e-10!32;CL:0000566!4.34e-10!32;CL:0000837!4.34e-10!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.18e-59,9;CL:0000789,2.18e-59,9;CL:0002420,2.18e-59,9;CL:0002419,2.18e-59,9;CL:0000790,2.18e-59,9;CL:0000624,3.83e-49,8;CL:0000084,1.18e-48,11;CL:0000827,1.18e-48,11;CL:0000838,1.26e-44,12;CL:0000542,3.24e-41,13;CL:0000051,3.24e-41,13;CL:0000738,1.40e-31,17;CL:0002087,1.40e-31,17;CL:0000893,3.35e-29,6;CL:0002489,3.35e-29,6;CL:0000898,3.35e-29,6;CL:0000809,3.35e-29,6;CL:0000810,3.35e-29,6;CL:0000895,3.35e-29,6;CL:0000808,3.35e-29,6;CL:0000894,3.35e-29,6;CL:0000806,3.35e-29,6;CL:0000807,3.35e-29,6;CL:0000805,3.35e-29,6;CL:0002425,3.35e-29,6;CL:0002436,3.35e-29,6;CL:0002427,3.35e-29,6;CL:0002428,3.35e-29,6;CL:0002429,3.35e-29,6;CL:0002433,3.35e-29,6;CL:0002431,3.35e-29,6;CL:0002432,3.35e-29,6;CL:0002031,1.57e-21,25;CL:0000988,7.62e-17,32;CL:0002032,7.62e-17,32;CL:0000037,7.62e-17,32;CL:0000837,7.62e-17,32;CL:0000815,1.20e-12,1;CL:0000792,1.20e-12,1;CL:0000625,2.01e-12,1;CL:0002320,1.00e-11,46;CL:0000134,1.00e-11,46;CL:0000219,5.55e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!4.73e-16!24;UBERON:0004177!1.77e-14!29;UBERON:0002370!2.80e-14!23;UBERON:0000974!2.80e-14!23;UBERON:0004807!2.80e-14!23;UBERON:0005058!2.80e-14!23;UBERON:0003351!2.80e-14!23;UBERON:0009113!2.80e-14!23;UBERON:0003295!2.80e-14!23;UBERON:0009722!2.80e-14!23;UBERON:0005562!2.80e-14!23;UBERON:0007690!2.80e-14!23;UBERON:0006562!1.46e-13!24;UBERON:0001557!1.46e-13!24;UBERON:0001042!1.46e-13!24;UBERON:0008814!1.46e-13!24;UBERON:0009145!1.46e-13!24;UBERON:0000072!9.95e-12!27;UBERON:0002193!3.01e-11!48;UBERON:0002390!1.17e-10!45;UBERON:0003061!1.17e-10!45;UBERON:0000063!7.26e-10!35;UBERON:0001004!4.72e-09!42;UBERON:0003081!2.30e-08!88;UBERON:0000065!6.43e-08!41;UBERON:0005057!7.38e-08!51;UBERON:0002405!2.35e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,7.11e-12,1;UBERON:0001736,7.11e-12,1;UBERON:0003293,7.11e-12,1;UBERON:0003294,7.11e-12,1;UBERON:0001829,7.11e-12,1;UBERON:0010047,7.11e-12,1;UBERON:0000167,7.11e-12,1;UBERON:0006298,7.11e-12,1;UBERON:0002384,1.00e-11,46;UBERON:0003408,1.78e-11,24;UBERON:0002370,5.79e-08,23;UBERON:0000974,5.79e-08,23;UBERON:0004807,5.79e-08,23;UBERON:0005058,5.79e-08,23;UBERON:0003351,5.79e-08,23;UBERON:0009113,5.79e-08,23;UBERON:0003295,5.79e-08,23;UBERON:0009722,5.79e-08,23;UBERON:0005562,5.79e-08,23;UBERON:0007690,5.79e-08,23;UBERON:0007811,1.03e-07,36;UBERON:0006562,1.20e-07,24;UBERON:0001557,1.20e-07,24;UBERON:0001042,1.20e-07,24;UBERON:0008814,1.20e-07,24;UBERON:0009145,1.20e-07,24;UBERON:0000072,7.81e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,6.45616617207881,1.83025338797167,1.40438715793196,0.513653904676515,0.159544317990673,1.71200729931206,1.48614684112296,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0.671130424230945,4.35217285206807,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p27@Akap13 | |||
}} |
Latest revision as of 02:25, 27 September 2015
Short description: | p27@Akap13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_Akap13_5end |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | -30bp_to_ENSMUST00000151560, uc009hws.1, uc009hwt.1_5end |
EntrezGene: | Akap13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 7.11e-12 | 1 |
submandibular gland | 7.11e-12 | 1 |
gland of oral region | 7.11e-12 | 1 |
gland of foregut | 7.11e-12 | 1 |
major salivary gland | 7.11e-12 | 1 |
oral gland | 7.11e-12 | 1 |
oral cavity | 7.11e-12 | 1 |
submandibular gland primordium | 7.11e-12 | 1 |
connective tissue | 1.00e-11 | 46 |
gland of gut | 1.78e-11 | 24 |
thymus | 5.79e-08 | 23 |
neck | 5.79e-08 | 23 |
respiratory system epithelium | 5.79e-08 | 23 |
hemolymphoid system gland | 5.79e-08 | 23 |
pharyngeal epithelium | 5.79e-08 | 23 |
thymic region | 5.79e-08 | 23 |
pharyngeal gland | 5.79e-08 | 23 |
entire pharyngeal arch endoderm | 5.79e-08 | 23 |
thymus primordium | 5.79e-08 | 23 |
early pharyngeal endoderm | 5.79e-08 | 23 |
craniocervical region | 1.03e-07 | 36 |
pharynx | 1.20e-07 | 24 |
upper respiratory tract | 1.20e-07 | 24 |
chordate pharynx | 1.20e-07 | 24 |
pharyngeal arch system | 1.20e-07 | 24 |
pharyngeal region of foregut | 1.20e-07 | 24 |
segment of respiratory tract | 7.81e-07 | 27 |