FFCP PHASE1:Mm9::chr6:36338209..36338221,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243764 | |EntrezGene=243764 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENSMUST00000169004_5end | |association_with_transcript=14bp_to_ENSMUST00000169004_5end | ||
|cluster_id=chr6:36338209..36338221,+ | |||
|description=CAGE_peak_5_at_Chrm2_5end | |description=CAGE_peak_5_at_Chrm2_5end | ||
|id=chr6:36338209..36338221,+ | |id=chr6:36338209..36338221,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.28e-08!33;CL:0000047!4.28e-08!33;CL:0000031!4.28e-08!33;CL:0000404!4.28e-08!33 | |ontology_enrichment_celltype=CL:0000540!4.28e-08!33;CL:0000047!4.28e-08!33;CL:0000031!4.28e-08!33;CL:0000404!4.28e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.77e-10,3;CL:0000540,5.68e-09,33;CL:0000047,5.68e-09,33;CL:0000031,5.68e-09,33;CL:0000404,5.68e-09,33;CL:0000393,2.73e-07,39;CL:0000211,2.73e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.58e-12!18;UBERON:0000948!6.58e-12!18;UBERON:0005498!6.58e-12!18;UBERON:0004140!6.58e-12!18;UBERON:0009881!6.58e-12!18;UBERON:0004141!6.58e-12!18;UBERON:0003084!6.58e-12!18;UBERON:0007005!6.58e-12!18;UBERON:0004139!6.58e-12!18;UBERON:0004291!6.58e-12!18;UBERON:0004535!5.71e-08!23;UBERON:0001009!5.71e-08!23;UBERON:0003103!7.66e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.64e-20,18;UBERON:0000948,2.64e-20,18;UBERON:0005498,2.64e-20,18;UBERON:0004140,2.64e-20,18;UBERON:0009881,2.64e-20,18;UBERON:0004141,2.64e-20,18;UBERON:0003084,2.64e-20,18;UBERON:0007005,2.64e-20,18;UBERON:0004139,2.64e-20,18;UBERON:0004291,2.64e-20,18;UBERON:0004535,2.04e-15,23;UBERON:0001009,2.04e-15,23;UBERON:0003103,5.89e-14,43;UBERON:0010314,4.58e-11,92;UBERON:0004872,4.34e-10,33;UBERON:0004684,7.77e-10,3;UBERON:0002275,7.77e-10,3;UBERON:0000013,1.56e-09,3;UBERON:0003076,8.61e-09,12;UBERON:0003057,8.61e-09,12;UBERON:0001017,1.29e-08,73;UBERON:0002240,2.18e-08,6;UBERON:0005174,2.18e-08,6;UBERON:0001137,2.18e-08,6;UBERON:0001016,2.70e-08,75;UBERON:0000025,4.31e-08,114;UBERON:0004111,2.80e-07,122;UBERON:0001896,3.00e-07,2;UBERON:0002298,3.00e-07,2;UBERON:0005290,3.00e-07,2;UBERON:0010096,3.00e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,1.99955689082663,0.662605622854841,0.122490799214954,0,0,1.10115880999389,2.55374676170375,2.61131106535614,0,0.0914876436024097,0.52091337055676,1.95428099300967,0.56276261003168,0.30559649555362,1.17851434189467,1.56608848879013,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,1.3481157546434,0,0,0.521472960576829,0.767146371990992,1.87009240103604,0.648965052271031,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0.621377317606506,0.234526059981096,0.540186184383045,1.18372367792605,1.18058539048442,0.925602677324269,3.25547522650571,2.41446061259657,3.03589890154641,2.96207729844265,2.79084688934462,7.37726166867287,9.5029991826466,3.07370161407471,6.03928884421673,0.420579897128254,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.779856348476481,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.10851914099963,0,0,0,0,0.335012514883631,0,0.195133647857799,0.315270288212382,0.664394068946325,0.318909537314974,0.81931657357869,0,0.289298117163023,0,0,0,0,2.0871576698413,2.22702204525186,0,0,0.315508219416257,1.17131623288992,0.430846795465598,0,0.445597348164788,0.849229592366497,1.21443210502468,1.46127928955656,1.97643888973262,2.57057053137446,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,2.96680483216816,0,0,0.740778109478847,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.432021363287205,0.418176592028937,0.218362563746178,0,0.165306911450672,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0.214368379079066,0,0,0.920650473014354,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.256100609619477,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0,0,0.177475806159338,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,1.99955689082663,0.662605622854841,0.122490799214954,0,0,1.10115880999389,2.55374676170375,2.61131106535614,0,0.0914876436024097,0.52091337055676,1.95428099300967,0.56276261003168,0.30559649555362,1.17851434189467,1.56608848879013,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,1.3481157546434,0,0,0.521472960576829,0.767146371990992,1.87009240103604,0.648965052271031,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0.556094498451196,0,0,0,0,0,0,0.621377317606506,0.234526059981096,0.540186184383045,1.18372367792605,1.18058539048442,0.925602677324269,3.25547522650571,2.41446061259657,3.03589890154641,2.96207729844265,2.79084688934462,7.37726166867287,9.5029991826466,3.07370161407471,6.03928884421673,0.420579897128254,0,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.779856348476481,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.10851914099963,0,0,0,0,0.335012514883631,0,0.195133647857799,0.315270288212382,0.664394068946325,0.318909537314974,0.81931657357869,0,0.289298117163023,0,0,0,0,2.0871576698413,2.22702204525186,0,0,0.315508219416257,1.17131623288992,0.430846795465598,0,0.445597348164788,0.849229592366497,1.21443210502468,1.46127928955656,1.97643888973262,2.57057053137446,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,2.96680483216816,0,0,0.740778109478847,0,0,0,0,0,0,0,0.790839983952838,0.609958401380546,0.432021363287205,0.418176592028937,0.218362563746178,0,0.165306911450672,0.523511883968059,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0.214368379079066,0,0,0.920650473014354,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.256100609619477,0.229741875822453,0,0.231768651889711,0.38581844092741,0,0,0,0.177475806159338,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p5@Chrm2 | |short_description=p5@Chrm2 | ||
}} | }} |
Latest revision as of 02:54, 27 September 2015
Short description: | p5@Chrm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Chrm2_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000169004_5end |
EntrezGene: | Chrm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.77e-10 | 3 |
neuron | 5.68e-09 | 33 |
neuronal stem cell | 5.68e-09 | 33 |
neuroblast | 5.68e-09 | 33 |
electrically signaling cell | 5.68e-09 | 33 |
electrically responsive cell | 2.73e-07 | 39 |
electrically active cell | 2.73e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.64e-20 | 18 |
heart | 2.64e-20 | 18 |
primitive heart tube | 2.64e-20 | 18 |
primary heart field | 2.64e-20 | 18 |
anterior lateral plate mesoderm | 2.64e-20 | 18 |
heart tube | 2.64e-20 | 18 |
heart primordium | 2.64e-20 | 18 |
cardiac mesoderm | 2.64e-20 | 18 |
cardiogenic plate | 2.64e-20 | 18 |
heart rudiment | 2.64e-20 | 18 |
cardiovascular system | 2.04e-15 | 23 |
circulatory system | 2.04e-15 | 23 |
compound organ | 5.89e-14 | 43 |
structure with developmental contribution from neural crest | 4.58e-11 | 92 |
splanchnic layer of lateral plate mesoderm | 4.34e-10 | 33 |
raphe nuclei | 7.77e-10 | 3 |
reticular formation | 7.77e-10 | 3 |
sympathetic nervous system | 1.56e-09 | 3 |
posterior neural tube | 8.61e-09 | 12 |
chordal neural plate | 8.61e-09 | 12 |
central nervous system | 1.29e-08 | 73 |
spinal cord | 2.18e-08 | 6 |
dorsal region element | 2.18e-08 | 6 |
dorsum | 2.18e-08 | 6 |
nervous system | 2.70e-08 | 75 |
tube | 4.31e-08 | 114 |
anatomical conduit | 2.80e-07 | 122 |
medulla oblongata | 3.00e-07 | 2 |
brainstem | 3.00e-07 | 2 |
myelencephalon | 3.00e-07 | 2 |
future myelencephalon | 3.00e-07 | 2 |