FFCP PHASE1:Mm9::chr15:81527686..81527728,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:81527686..81527728,-
|short_description=p1@Chadl
|description=CAGE_peak_1_at_Chadl_5end
|association_with_transcript=0bp_to_ENSMUST00000072910,NM_00116432...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=214685 | |EntrezGene=214685 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=69 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q7T7 | |UniProt=E9Q7T7 | ||
|association_with_transcript=0bp_to_ENSMUST00000072910,NM_001164320,uc007wwy.2_5end | |||
|cluster_id=chr15:81527686..81527728,- | |||
|description=CAGE_peak_1_at_Chadl_5end | |||
|id=chr15:81527686..81527728,- | |||
|ontology_enrichment_celltype=CL:0000221!4.53e-10!44;CL:0000133!4.53e-10!44;CL:0000540!1.02e-09!33;CL:0000047!1.02e-09!33;CL:0000031!1.02e-09!33;CL:0000404!1.02e-09!33;CL:0002319!1.82e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.79e-10,44;CL:0000133,1.79e-10,44;CL:0000540,2.27e-10,33;CL:0000047,2.27e-10,33;CL:0000031,2.27e-10,33;CL:0000404,2.27e-10,33;CL:0002319,9.04e-10,43;CL:0000393,2.54e-07,39;CL:0000211,2.54e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.29e-21!102;UBERON:0000924!4.29e-21!102;UBERON:0006601!4.29e-21!102;UBERON:0000073!1.69e-19!75;UBERON:0001016!1.69e-19!75;UBERON:0001017!5.83e-19!73;UBERON:0005743!5.83e-19!73;UBERON:0002346!1.30e-12!71;UBERON:0003075!1.30e-12!71;UBERON:0007284!1.30e-12!71;UBERON:0001049!1.53e-10!52;UBERON:0005068!1.53e-10!52;UBERON:0006241!1.53e-10!52;UBERON:0007135!1.53e-10!52;UBERON:0000033!2.28e-10!63;UBERON:0000955!3.47e-09!50;UBERON:0006238!3.47e-09!50;UBERON:0002020!5.06e-09!34;UBERON:0002616!8.19e-09!49;UBERON:0000468!1.40e-07!333;UBERON:0003056!1.92e-07!49;UBERON:0003080!2.49e-07!40;UBERON:0002780!6.22e-07!39;UBERON:0001890!6.22e-07!39;UBERON:0006240!6.22e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.53e-22,95;UBERON:0000924,6.53e-22,95;UBERON:0006601,6.53e-22,95;UBERON:0001016,6.61e-22,75;UBERON:0001017,2.99e-21,73;UBERON:0010371,2.64e-14,73;UBERON:0002346,1.92e-12,64;UBERON:0003075,1.92e-12,64;UBERON:0007284,1.92e-12,64;UBERON:0000073,2.29e-12,54;UBERON:0001049,2.37e-11,52;UBERON:0005068,2.37e-11,52;UBERON:0006241,2.37e-11,52;UBERON:0007135,2.37e-11,52;UBERON:0002020,7.20e-09,34;UBERON:0000955,2.11e-08,47;UBERON:0006238,2.11e-08,47;UBERON:0010314,2.58e-08,92;UBERON:0002616,5.54e-08,46;UBERON:0003080,3.56e-07,40;UBERON:0003056,5.01e-07,49;UBERON:0002021,6.56e-07,10;UBERON:0000411,6.56e-07,10;UBERON:0001950,6.56e-07,10 | |||
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| ||
|short_description=p1@Chadl | |||
}} | }} |
Latest revision as of 04:17, 27 September 2015
Short description: | p1@Chadl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chadl_5end |
Coexpression cluster: | MCL_coexpression_mm9:69 |
Association with transcript: | 0bp_to_ENSMUST00000072910, NM_001164320, uc007wwy.2_5end |
EntrezGene: | Chadl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.79e-10 | 44 |
neurectodermal cell | 1.79e-10 | 44 |
neuron | 2.27e-10 | 33 |
neuronal stem cell | 2.27e-10 | 33 |
neuroblast | 2.27e-10 | 33 |
electrically signaling cell | 2.27e-10 | 33 |
neural cell | 9.04e-10 | 43 |
electrically responsive cell | 2.54e-07 | 39 |
electrically active cell | 2.54e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.53e-22 | 95 |
ectoderm | 6.53e-22 | 95 |
presumptive ectoderm | 6.53e-22 | 95 |
nervous system | 6.61e-22 | 75 |
central nervous system | 2.99e-21 | 73 |
ecto-epithelium | 2.64e-14 | 73 |
neurectoderm | 1.92e-12 | 64 |
neural plate | 1.92e-12 | 64 |
presumptive neural plate | 1.92e-12 | 64 |
regional part of nervous system | 2.29e-12 | 54 |
neural tube | 2.37e-11 | 52 |
neural rod | 2.37e-11 | 52 |
future spinal cord | 2.37e-11 | 52 |
neural keel | 2.37e-11 | 52 |
gray matter | 7.20e-09 | 34 |
brain | 2.11e-08 | 47 |
future brain | 2.11e-08 | 47 |
structure with developmental contribution from neural crest | 2.58e-08 | 92 |
regional part of brain | 5.54e-08 | 46 |
anterior neural tube | 3.56e-07 | 40 |
pre-chordal neural plate | 5.01e-07 | 49 |
occipital lobe | 6.56e-07 | 10 |
visual cortex | 6.56e-07 | 10 |
neocortex | 6.56e-07 | 10 |