FFCP PHASE1:Mm9::chr15:84686450..84686462,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=271305 | |EntrezGene=271305 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C966 | |UniProt=Q8C966 | ||
|association_with_transcript=16bp_to_ENSMUST00000159939_5end | |association_with_transcript=16bp_to_ENSMUST00000159939_5end | ||
|cluster_id=chr15:84686450..84686462,- | |||
|description=CAGE_peak_8_at_Phf21b_5end | |description=CAGE_peak_8_at_Phf21b_5end | ||
|id=chr15:84686450..84686462,- | |id=chr15:84686450..84686462,- | ||
|ontology_enrichment_celltype=CL:0000540!2.49e-11!33;CL:0000047!2.49e-11!33;CL:0000031!2.49e-11!33;CL:0000404!2.49e-11!33;CL:0000221!4.26e-11!44;CL:0000133!4.26e-11!44;CL:0002319!1.14e-10!43;CL:0000117!1.88e-08!23;CL:0000337!1.88e-08!23;CL:0000393!3.71e-08!39;CL:0000211!3.71e-08!39;CL:0000055!1.04e-07!50;CL:0002609!3.85e-07!6 | |ontology_enrichment_celltype=CL:0000540!2.49e-11!33;CL:0000047!2.49e-11!33;CL:0000031!2.49e-11!33;CL:0000404!2.49e-11!33;CL:0000221!4.26e-11!44;CL:0000133!4.26e-11!44;CL:0002319!1.14e-10!43;CL:0000117!1.88e-08!23;CL:0000337!1.88e-08!23;CL:0000393!3.71e-08!39;CL:0000211!3.71e-08!39;CL:0000055!1.04e-07!50;CL:0002609!3.85e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.02e-32,6;CL:0000117,4.99e-18,23;CL:0000337,4.99e-18,23;CL:0002608,3.12e-17,3;CL:0000540,3.22e-12,33;CL:0000047,3.22e-12,33;CL:0000031,3.22e-12,33;CL:0000404,3.22e-12,33;CL:0002319,3.32e-11,43;CL:0000221,6.42e-11,44;CL:0000133,6.42e-11,44;CL:0000393,3.71e-10,39;CL:0000211,3.71e-10,39;CL:0002613,6.89e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.47e-21!73;UBERON:0005743!2.47e-21!73;UBERON:0000073!5.35e-21!75;UBERON:0001016!5.35e-21!75;UBERON:0002346!2.06e-20!71;UBERON:0003075!2.06e-20!71;UBERON:0007284!2.06e-20!71;UBERON:0000033!3.24e-20!63;UBERON:0004121!1.47e-19!102;UBERON:0000924!1.47e-19!102;UBERON:0006601!1.47e-19!102;UBERON:0003056!9.17e-18!49;UBERON:0001049!4.10e-16!52;UBERON:0005068!4.10e-16!52;UBERON:0006241!4.10e-16!52;UBERON:0007135!4.10e-16!52;UBERON:0000955!1.89e-15!50;UBERON:0006238!1.89e-15!50;UBERON:0002616!9.08e-15!49;UBERON:0002780!1.23e-13!39;UBERON:0001890!1.23e-13!39;UBERON:0006240!1.23e-13!39;UBERON:0003080!5.33e-13!40;UBERON:0007811!1.43e-11!86;UBERON:0002020!9.39e-10!34;UBERON:0000153!1.11e-09!94;UBERON:0002791!4.29e-09!29;UBERON:0003528!4.29e-09!29;UBERON:0001893!4.29e-09!29;UBERON:0000956!1.01e-07!21;UBERON:0001869!1.01e-07!21;UBERON:0000203!1.01e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!2.47e-21!73;UBERON:0005743!2.47e-21!73;UBERON:0000073!5.35e-21!75;UBERON:0001016!5.35e-21!75;UBERON:0002346!2.06e-20!71;UBERON:0003075!2.06e-20!71;UBERON:0007284!2.06e-20!71;UBERON:0000033!3.24e-20!63;UBERON:0004121!1.47e-19!102;UBERON:0000924!1.47e-19!102;UBERON:0006601!1.47e-19!102;UBERON:0003056!9.17e-18!49;UBERON:0001049!4.10e-16!52;UBERON:0005068!4.10e-16!52;UBERON:0006241!4.10e-16!52;UBERON:0007135!4.10e-16!52;UBERON:0000955!1.89e-15!50;UBERON:0006238!1.89e-15!50;UBERON:0002616!9.08e-15!49;UBERON:0002780!1.23e-13!39;UBERON:0001890!1.23e-13!39;UBERON:0006240!1.23e-13!39;UBERON:0003080!5.33e-13!40;UBERON:0007811!1.43e-11!86;UBERON:0002020!9.39e-10!34;UBERON:0000153!1.11e-09!94;UBERON:0002791!4.29e-09!29;UBERON:0003528!4.29e-09!29;UBERON:0001893!4.29e-09!29;UBERON:0000956!1.01e-07!21;UBERON:0001869!1.01e-07!21;UBERON:0000203!1.01e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,5.51e-14,49;UBERON:0003528,4.16e-11,29;UBERON:0002791,4.16e-11,29;UBERON:0001893,4.16e-11,29;UBERON:0002346,2.65e-10,64;UBERON:0003075,2.65e-10,64;UBERON:0007284,2.65e-10,64;UBERON:0002780,4.98e-10,39;UBERON:0001890,4.98e-10,39;UBERON:0006240,4.98e-10,39;UBERON:0003080,9.49e-10,40;UBERON:0002020,2.48e-09,34;UBERON:0000956,4.57e-09,21;UBERON:0001869,4.57e-09,21;UBERON:0000203,4.57e-09,21;UBERON:0004121,5.17e-09,95;UBERON:0000924,5.17e-09,95;UBERON:0006601,5.17e-09,95;UBERON:0010371,8.14e-09,73;UBERON:0002616,2.54e-08,46;UBERON:0000955,4.05e-08,47;UBERON:0006238,4.05e-08,47;UBERON:0001954,1.13e-07,7;UBERON:0003022,1.13e-07,7;UBERON:0002421,1.13e-07,7;UBERON:0000349,1.13e-07,7;UBERON:0002600,1.13e-07,7;UBERON:0001017,2.59e-07,73;UBERON:0001049,3.19e-07,52;UBERON:0005068,3.19e-07,52;UBERON:0006241,3.19e-07,52;UBERON:0007135,3.19e-07,52;UBERON:0001016,4.48e-07,75;UBERON:0000073,6.55e-07,54 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,2.22548106945558,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.15265491596466,2.69592992002042,2.02508907497536,3.36519938162211,0.571301968807607,0,2.57230678351403,3.1629005436018,2.75765635983006,0,0.127687338085188,0.307213066512487,1.45074916503213,0.914876436024097,1.56274011167028,0.279182999001381,0,0,0,0.427115042397309,0.931997229126503,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0,0,0.628271760564322,0.173824320192276,1.02286182932132,0.20778804455956,0.162241263067758,0,0.124406970610093,0.252722758433675,0.420883711772948,0,0.919608417733892,0.360124259610698,0.90422890701429,1.2246569847239,1.66547836370305,1.3118241438362,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0.210289948564127,0.823236899034275,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0.327869890753351,0,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0.642642632843614,0,0.178065603667255,0,0,0,0.242780636154981,0,0.565815239267694,0,0,0.775284879504663,0,0,0,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,1.03787347584177,1.19707462020309,0.512200817262403,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0,0.220591419119515,0 | |phase1_expression=0.480446541314382,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0.261199789138935,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,2.22548106945558,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.15265491596466,2.69592992002042,2.02508907497536,3.36519938162211,0.571301968807607,0,2.57230678351403,3.1629005436018,2.75765635983006,0,0.127687338085188,0.307213066512487,1.45074916503213,0.914876436024097,1.56274011167028,0.279182999001381,0,0,0,0.427115042397309,0.931997229126503,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,0,0,0.628271760564322,0.173824320192276,1.02286182932132,0.20778804455956,0.162241263067758,0,0.124406970610093,0.252722758433675,0.420883711772948,0,0.919608417733892,0.360124259610698,0.90422890701429,1.2246569847239,1.66547836370305,1.3118241438362,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0.210289948564127,0.823236899034275,0,0.264450566663544,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0.327869890753351,0,0.315508219416257,0.780877488593277,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.292255857911312,0,0.642642632843614,0,0.178065603667255,0,0,0,0.242780636154981,0,0.565815239267694,0,0,0.775284879504663,0,0,0,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.535106452806212,0.658196082408484,0.608929898229199,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0,0,0,0.134864346384821,0,0,0.259229946583586,0,0.56369293868419,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,1.03787347584177,1.19707462020309,0.512200817262403,0,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0,0.192075457214608,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0,0.220591419119515,0 | ||
|short_description=p8@Phf21b | |short_description=p8@Phf21b | ||
}} | }} |
Latest revision as of 06:05, 27 September 2015
Short description: | p8@Phf21b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Phf21b_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | 16bp_to_ENSMUST00000159939_5end |
EntrezGene: | Phf21b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.02e-32 | 6 |
CNS neuron (sensu Vertebrata) | 4.99e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.99e-18 | 23 |
hippocampal neuron | 3.12e-17 | 3 |
neuron | 3.22e-12 | 33 |
neuronal stem cell | 3.22e-12 | 33 |
neuroblast | 3.22e-12 | 33 |
electrically signaling cell | 3.22e-12 | 33 |
neural cell | 3.32e-11 | 43 |
ectodermal cell | 6.42e-11 | 44 |
neurectodermal cell | 6.42e-11 | 44 |
electrically responsive cell | 3.71e-10 | 39 |
electrically active cell | 3.71e-10 | 39 |
striatum neuron | 6.89e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 5.51e-14 | 49 |
brain grey matter | 4.16e-11 | 29 |
regional part of telencephalon | 4.16e-11 | 29 |
telencephalon | 4.16e-11 | 29 |
neurectoderm | 2.65e-10 | 64 |
neural plate | 2.65e-10 | 64 |
presumptive neural plate | 2.65e-10 | 64 |
regional part of forebrain | 4.98e-10 | 39 |
forebrain | 4.98e-10 | 39 |
future forebrain | 4.98e-10 | 39 |
anterior neural tube | 9.49e-10 | 40 |
gray matter | 2.48e-09 | 34 |
cerebral cortex | 4.57e-09 | 21 |
cerebral hemisphere | 4.57e-09 | 21 |
pallium | 4.57e-09 | 21 |
ectoderm-derived structure | 5.17e-09 | 95 |
ectoderm | 5.17e-09 | 95 |
presumptive ectoderm | 5.17e-09 | 95 |
ecto-epithelium | 8.14e-09 | 73 |
regional part of brain | 2.54e-08 | 46 |
brain | 4.05e-08 | 47 |
future brain | 4.05e-08 | 47 |
Ammon's horn | 1.13e-07 | 7 |
lobe parts of cerebral cortex | 1.13e-07 | 7 |
hippocampal formation | 1.13e-07 | 7 |
limbic system | 1.13e-07 | 7 |
limbic lobe | 1.13e-07 | 7 |
central nervous system | 2.59e-07 | 73 |
neural tube | 3.19e-07 | 52 |
neural rod | 3.19e-07 | 52 |
future spinal cord | 3.19e-07 | 52 |
neural keel | 3.19e-07 | 52 |
nervous system | 4.48e-07 | 75 |
regional part of nervous system | 6.55e-07 | 54 |