FFCP PHASE1:Mm9::chr6:47780508..47780583,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:47780508..47780583,-
|short_description=p1@Zfp786
|description=CAGE_peak_1_at_Zfp786_5end
|association_with_transcript=0bp_to_ENSMUST00000143979_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=330301 | |EntrezGene=330301 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000143979_5end | |||
|cluster_id=chr6:47780508..47780583,- | |||
|description=CAGE_peak_1_at_Zfp786_5end | |||
|id=chr6:47780508..47780583,- | |||
|ontology_enrichment_celltype=CL:0000117!1.71e-13!23;CL:0000337!1.71e-13!23;CL:0000540!2.07e-11!33;CL:0000047!2.07e-11!33;CL:0000031!2.07e-11!33;CL:0000404!2.07e-11!33;CL:0000393!3.94e-07!39;CL:0000211!3.94e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.16e-15,23;CL:0000337,1.16e-15,23;CL:0000540,4.16e-12,33;CL:0000047,4.16e-12,33;CL:0000031,4.16e-12,33;CL:0000404,4.16e-12,33;CL:0000393,1.66e-08,39;CL:0000211,1.66e-08,39;CL:0002319,9.18e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.32e-21!63;UBERON:0002346!2.94e-21!71;UBERON:0003075!2.94e-21!71;UBERON:0007284!2.94e-21!71;UBERON:0003056!4.24e-20!49;UBERON:0004121!8.75e-20!102;UBERON:0000924!8.75e-20!102;UBERON:0006601!8.75e-20!102;UBERON:0001017!2.15e-18!73;UBERON:0005743!2.15e-18!73;UBERON:0001049!2.16e-18!52;UBERON:0005068!2.16e-18!52;UBERON:0006241!2.16e-18!52;UBERON:0007135!2.16e-18!52;UBERON:0000955!2.68e-18!50;UBERON:0006238!2.68e-18!50;UBERON:0002616!1.09e-17!49;UBERON:0000073!1.92e-17!75;UBERON:0001016!1.92e-17!75;UBERON:0003080!1.70e-16!40;UBERON:0002780!4.50e-16!39;UBERON:0001890!4.50e-16!39;UBERON:0006240!4.50e-16!39;UBERON:0002020!1.34e-15!34;UBERON:0002791!1.34e-13!29;UBERON:0003528!1.34e-13!29;UBERON:0001893!1.34e-13!29;UBERON:0000153!6.14e-13!94;UBERON:0007811!7.76e-12!86;UBERON:0000956!8.43e-10!21;UBERON:0001869!8.43e-10!21;UBERON:0000203!8.43e-10!21;UBERON:0000468!4.09e-08!333;UBERON:0002619!2.11e-07!17;UBERON:0000922!5.42e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.28e-26,64;UBERON:0003075,7.28e-26,64;UBERON:0007284,7.28e-26,64;UBERON:0010371,5.84e-25,73;UBERON:0003056,1.27e-23,49;UBERON:0000073,1.54e-23,54;UBERON:0004121,1.60e-22,95;UBERON:0000924,1.60e-22,95;UBERON:0006601,1.60e-22,95;UBERON:0001049,9.66e-22,52;UBERON:0005068,9.66e-22,52;UBERON:0006241,9.66e-22,52;UBERON:0007135,9.66e-22,52;UBERON:0001017,9.70e-22,73;UBERON:0001016,1.73e-20,75;UBERON:0000955,2.82e-20,47;UBERON:0006238,2.82e-20,47;UBERON:0002616,1.55e-19,46;UBERON:0003080,3.58e-19,40;UBERON:0002780,1.19e-18,39;UBERON:0001890,1.19e-18,39;UBERON:0006240,1.19e-18,39;UBERON:0002020,2.01e-17,34;UBERON:0003528,1.50e-15,29;UBERON:0002791,1.50e-15,29;UBERON:0001893,1.50e-15,29;UBERON:0010314,1.33e-14,92;UBERON:0000956,6.97e-11,21;UBERON:0001869,6.97e-11,21;UBERON:0000203,6.97e-11,21;UBERON:0002619,5.59e-08,17 | |||
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| ||
|short_description=p1@Zfp786 | |||
}} | }} |
Latest revision as of 07:07, 27 September 2015
Short description: | p1@Zfp786 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp786_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000143979_5end |
EntrezGene: | Zfp786 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.16e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-15 | 23 |
neuron | 4.16e-12 | 33 |
neuronal stem cell | 4.16e-12 | 33 |
neuroblast | 4.16e-12 | 33 |
electrically signaling cell | 4.16e-12 | 33 |
electrically responsive cell | 1.66e-08 | 39 |
electrically active cell | 1.66e-08 | 39 |
neural cell | 9.18e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 7.28e-26 | 64 |
neural plate | 7.28e-26 | 64 |
presumptive neural plate | 7.28e-26 | 64 |
ecto-epithelium | 5.84e-25 | 73 |
pre-chordal neural plate | 1.27e-23 | 49 |
regional part of nervous system | 1.54e-23 | 54 |
ectoderm-derived structure | 1.60e-22 | 95 |
ectoderm | 1.60e-22 | 95 |
presumptive ectoderm | 1.60e-22 | 95 |
neural tube | 9.66e-22 | 52 |
neural rod | 9.66e-22 | 52 |
future spinal cord | 9.66e-22 | 52 |
neural keel | 9.66e-22 | 52 |
central nervous system | 9.70e-22 | 73 |
nervous system | 1.73e-20 | 75 |
brain | 2.82e-20 | 47 |
future brain | 2.82e-20 | 47 |
regional part of brain | 1.55e-19 | 46 |
anterior neural tube | 3.58e-19 | 40 |
regional part of forebrain | 1.19e-18 | 39 |
forebrain | 1.19e-18 | 39 |
future forebrain | 1.19e-18 | 39 |
gray matter | 2.01e-17 | 34 |
brain grey matter | 1.50e-15 | 29 |
regional part of telencephalon | 1.50e-15 | 29 |
telencephalon | 1.50e-15 | 29 |
structure with developmental contribution from neural crest | 1.33e-14 | 92 |
cerebral cortex | 6.97e-11 | 21 |
cerebral hemisphere | 6.97e-11 | 21 |
pallium | 6.97e-11 | 21 |
regional part of cerebral cortex | 5.59e-08 | 17 |