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FFCP PHASE1:Mm9::chr18:47528512..47528532,-: Difference between revisions

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(Created page with "{{FFCP |id=chr18:47528512..47528532,- |short_description=p1@Sema6a |description=CAGE_peak_1_at_Sema6a_5end |association_with_transcript=0bp_to_ENSMUST00000115449,ENSMUST00...")
 
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{{FFCP
{{FFCP
|id=chr18:47528512..47528532,-
|DHSsupport=NA
|short_description=p1@Sema6a
|DPIdataset=NA
|description=CAGE_peak_1_at_Sema6a_5end
|association_with_transcript=0bp_to_ENSMUST00000115449,ENSMUST00000141224,ENSMUST00000151382,NM_018744,uc008ewa.1,uc008ewb.1,uc008ewc.1,uc008ewd.1_5end
|EntrezGene=20358
|EntrezGene=20358
|HGNC=
|HGNC=
|MCL_coexpression_id=3146
|TSSclassifier=NA
|UniProt=O35464,Q8BXZ7,Q8BUT0
|UniProt=O35464,Q8BXZ7,Q8BUT0
|association_with_transcript=0bp_to_ENSMUST00000115449,ENSMUST00000141224,ENSMUST00000151382,NM_018744,uc008ewa.1,uc008ewb.1,uc008ewc.1,uc008ewd.1_5end
|cluster_id=chr18:47528512..47528532,-
|description=CAGE_peak_1_at_Sema6a_5end
|id=chr18:47528512..47528532,-
|ontology_enrichment_celltype=CL:0000540!1.01e-11!33;CL:0000047!1.01e-11!33;CL:0000031!1.01e-11!33;CL:0000404!1.01e-11!33;CL:0000221!1.49e-11!44;CL:0000133!1.49e-11!44;CL:0002319!1.58e-11!43;CL:0000055!2.75e-09!50;CL:0000117!3.67e-09!23;CL:0000337!3.67e-09!23;CL:0000393!1.23e-08!39;CL:0000211!1.23e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,9.87e-12,33;CL:0000047,9.87e-12,33;CL:0000031,9.87e-12,33;CL:0000404,9.87e-12,33;CL:0000221,1.46e-11,44;CL:0000133,1.46e-11,44;CL:0002319,1.55e-11,43;CL:0000117,3.62e-09,23;CL:0000337,3.62e-09,23;CL:0000393,1.21e-08,39;CL:0000211,1.21e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.60e-19!102;UBERON:0000924!2.60e-19!102;UBERON:0006601!2.60e-19!102;UBERON:0001017!5.02e-19!73;UBERON:0005743!5.02e-19!73;UBERON:0000073!1.76e-18!75;UBERON:0001016!1.76e-18!75;UBERON:0000468!7.52e-13!333;UBERON:0000033!1.40e-11!63;UBERON:0002346!1.77e-11!71;UBERON:0003075!1.77e-11!71;UBERON:0007284!1.77e-11!71;UBERON:0001049!8.29e-11!52;UBERON:0005068!8.29e-11!52;UBERON:0006241!8.29e-11!52;UBERON:0007135!8.29e-11!52;UBERON:0000922!8.72e-10!328;UBERON:0000955!1.01e-09!50;UBERON:0006238!1.01e-09!50;UBERON:0002616!2.72e-09!49;UBERON:0003056!6.44e-09!49;UBERON:0002020!8.55e-09!34;UBERON:0000025!5.09e-08!114;UBERON:0004111!3.09e-07!122;UBERON:0003080!4.96e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.22e-21,95;UBERON:0000924,1.22e-21,95;UBERON:0006601,1.22e-21,95;UBERON:0001017,4.85e-19,73;UBERON:0001016,1.70e-18,75;UBERON:0010371,5.63e-15,73;UBERON:0002346,1.24e-13,64;UBERON:0003075,1.24e-13,64;UBERON:0007284,1.24e-13,64;UBERON:0000073,5.01e-12,54;UBERON:0001049,8.14e-11,52;UBERON:0005068,8.14e-11,52;UBERON:0006241,8.14e-11,52;UBERON:0007135,8.14e-11,52;UBERON:0010314,2.32e-09,92;UBERON:0000922,5.23e-09,320;UBERON:0003056,6.35e-09,49;UBERON:0002020,8.43e-09,34;UBERON:0000955,3.09e-08,47;UBERON:0006238,3.09e-08,47;UBERON:0000025,5.02e-08,114;UBERON:0002616,7.89e-08,46;UBERON:0004111,3.06e-07,122;UBERON:0003080,4.91e-07,40
|phase1_expression=28.1861970904437,6.2815573375085,10.9199817453489,6.95667686005709,5.50985302940982,2.51818907867835,2.80335168714631,0,0,0,0,0,0,0,2.6648780945253,1.01237633694913,0,0,0.548457734422955,0.42438965179803,23.5569913718463,0,0,5.11975752938901,4.35877634027623,5.16808767703518,2.58457197695445,2.37018355954478,6.27077284206034,3.78045194639896,1.33038306393183,0,0,15.8481681015439,0.577703239502549,0.664938581433969,2.04169356262369,0,0,0,0,0,0,9.9458486200706,9.22530074097583,24.9623582939887,9.38869613217647,29.2153709549798,21.5292459079782,35.5806715305939,21.5579089303058,56.0635001023389,0.167782606057736,0,0,6.68874533693462,8.88253663810146,2.57836046138721,100.146648125501,119.022970336207,135.639920350322,6.77689064138264,8.00365316500025,0.449949858640699,0.988866362566974,0,38.6484142568742,53.4063444396961,21.4637497478549,22.8160035780557,23.135745748652,133.399009716576,134.729809980484,22.6607978547665,16.7729574281914,42.284064184061,95.8008164694682,75.9739661606867,77.7249058276592,77.8129097608144,42.4502666315181,65.6350846901518,47.4611098302348,33.2029939918691,43.5475006163909,127.574177510098,89.2670438610375,67.1038004971082,14.0850719599722,21.6890377506474,202.035548625069,45.6024654800135,1.3599426674155,4.31762553310254,19.4932925234301,21.9533174677694,7.8648875273781,0,0,0,28.0278405355594,0,0,0,2.16491041011214,4.56047757855178,2.02209778005913,10.9616524530298,22.7865337609511,10.8362761517322,14.9197381018877,11.8741536541735,15.4512383161559,14.1679282119465,17.1679512418129,10.6816602630224,10.6293836125781,33.4024514484996,3.5384422077995,27.0150639412173,16.5631138845295,12.6067565815158,50.325775528893,36.0120380324203,34.5587066242201,15.8383374229327,0,1.19980546198682,0,59.9162557619291,37.5150494311274,20.8586224507355,26.0736480288415,22.7586757023994,50.4924948279731,50.4570328140726,20.4697121339136,11.5698482667387,3.79084137650512,11.7847439296425,53.2192611717458,30.3470777852184,39.4336064273715,37.525499641093,38.3725855213489,47.2739627851096,43.3838984711544,34.9249550497671,36.2154228127175,77.3443867886381,99.0604829043032,48.0038654016389,57.8338278389244,42.4867643157043,36.0118738713901,32.4425854914144,0,0,0,6.83515049367156,10.3191466391682,9.36322719597277,14.678173606283,10.8220327461072,14.5011086114136,12.0917651270212,16.3646774853768,18.6824547787471,17.4433440908289,35.2960047770055,45.6417397743168,38.4505966928624,30.517466025456,42.4092283282775,24.1833440848746,35.9137097203703,15.8601015832223,7.93351699990633,27.0876078179747,38.5512875288328,34.6653470956431,30.2525286935014,27.3524993929191,19.403013863481,26.0990983849481,31.2928013975621,22.368833583224,20.8904295643208,27.2949721966768,13.4822911298133,16.2103537406021,22.7021051509979,20.1047975010267,26.1629093876279,34.9393980586549,26.0673699642002,23.4682509472827,22.5837340046826,25.1681417754544,23.3224033807771,21.8228231699511,12.5865107200237,16.3048944897932,8.00856507437251,6.09332884850929,5.39669069723649,7.1001042485976,7.23531479257251,8.40265310878685,13.5217184601881,9.89024883327716,4.94210543738547,30.1913233707445,24.5613025461212,22.1546747911338,16.6702059445094,13.2754086006215,20.7450714186248,89.4205440406367,20.6545638829828,23.9558515369778,23.424821836976,24.1730955737157,37.1863891520831,55.9402556082132,68.2967767502296,75.1919637386531,75.9623885495298,92.962130127315,91.4357296113818,70.9735275468831,80.858823747065,0,0,11.8023425524569,14.6246475541508,46.2385699164841,47.0018863234735,0,33.0736914637729,37.2299698911183,40.996068151147,30.5901224780574,45.88200920689,43.4457414460669,63.1260663659096,36.8377738524154,31.855888512333,43.0863677961711,55.5885877409726,27.2524963599876,27.6001685684246,31.7629570739473,29.8595922580289,2.65490276679926,19.4224508923985,19.9533547596736,14.3339860614483,21.2617362874156,21.5204603560749,22.4832615056352,27.2650297108129,22.8158322166222,18.3301319602773,9.48767477174989,13.4076206222643,10.8940673841212,42.6744792854205,23.6726391322441,26.792129378949,27.6650764481947,24.7932656466878,22.8723138636948,18.8768268451052,19.7124234773517,19.4885505194715,7.05690873775878,43.2001982706678,55.7052272100874,34.6799318336896,37.9604053929974,56.6286104120461,23.0269860937582,46.912601408659,6.66396435111626,49.120074575247,34.2609875633967,9.41842285023455,6.01454601972511,4.57556346413045,0.679913719975421,1.11961161858926,0.138199973804424,10.5013767981662,24.3578715057474,27.6514475292514,19.1169453254588,20.9088296014469,18.5608179184251,14.7002137559455,17.5225326137712,4.97336289769656,36.5514224682856,15.5334828271731,1.12738587736838,17.7924689792335,11.913011312911,10.6948153589226,8.00790905561933,7.7719817725758,11.0315804327009,7.81226309063701,3.25063967719704,0.724752362478018,3.74439008135225,2.21207784439725,17.0289180843738,12.4280258169441,4.54722880422283,5.54982756569192,4.96703386953162,3.00488623799922,2.80610101631697,2.1202954489111,1.82896335972,2.11734988787365,1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|phase1_expression=28.1861970904437,6.2815573375085,10.9199817453489,6.95667686005709,5.50985302940982,2.51818907867835,2.80335168714631,0,0,0,0,0,0,0,2.6648780945253,1.01237633694913,0,0,0.548457734422955,0.42438965179803,23.5569913718463,0,0,5.11975752938901,4.35877634027623,5.16808767703518,2.58457197695445,2.37018355954478,6.27077284206034,3.78045194639896,1.33038306393183,0,0,15.8481681015439,0.577703239502549,0.664938581433969,2.04169356262369,0,0,0,0,0,0,9.9458486200706,9.22530074097583,24.9623582939887,9.38869613217647,29.2153709549798,21.5292459079782,35.5806715305939,21.5579089303058,56.0635001023389,0.167782606057736,0,0,6.68874533693462,8.88253663810146,2.57836046138721,100.146648125501,119.022970336207,135.639920350322,6.77689064138264,8.00365316500025,0.449949858640699,0.988866362566974,0,38.6484142568742,53.4063444396961,21.4637497478549,22.8160035780557,23.135745748652,133.399009716576,134.729809980484,22.6607978547665,16.7729574281914,42.284064184061,95.8008164694682,75.9739661606867,77.7249058276592,77.8129097608144,42.4502666315181,65.6350846901518,47.4611098302348,33.2029939918691,43.5475006163909,127.574177510098,89.2670438610375,67.1038004971082,14.0850719599722,21.6890377506474,202.035548625069,45.6024654800135,1.3599426674155,4.31762553310254,19.4932925234301,21.9533174677694,7.8648875273781,0,0,0,28.0278405355594,0,0,0,2.16491041011214,4.56047757855178,2.02209778005913,10.9616524530298,22.7865337609511,10.8362761517322,14.9197381018877,11.8741536541735,15.4512383161559,14.1679282119465,17.1679512418129,10.6816602630224,10.6293836125781,33.4024514484996,3.5384422077995,27.0150639412173,16.5631138845295,12.6067565815158,50.325775528893,36.0120380324203,34.5587066242201,15.8383374229327,0,1.19980546198682,0,59.9162557619291,37.5150494311274,20.8586224507355,26.0736480288415,22.7586757023994,50.4924948279731,50.4570328140726,20.4697121339136,11.5698482667387,3.79084137650512,11.7847439296425,53.2192611717458,30.3470777852184,39.4336064273715,37.525499641093,38.3725855213489,47.2739627851096,43.3838984711544,34.9249550497671,36.2154228127175,77.3443867886381,99.0604829043032,48.0038654016389,57.8338278389244,42.4867643157043,36.0118738713901,32.4425854914144,0,0,0,6.83515049367156,10.3191466391682,9.36322719597277,14.678173606283,10.8220327461072,14.5011086114136,12.0917651270212,16.3646774853768,18.6824547787471,17.4433440908289,35.2960047770055,45.6417397743168,38.4505966928624,30.517466025456,42.4092283282775,24.1833440848746,35.9137097203703,15.8601015832223,7.93351699990633,27.0876078179747,38.5512875288328,34.6653470956431,30.2525286935014,27.3524993929191,19.403013863481,26.0990983849481,31.2928013975621,22.368833583224,20.8904295643208,27.2949721966768,13.4822911298133,16.2103537406021,22.7021051509979,20.1047975010267,26.1629093876279,34.9393980586549,26.0673699642002,23.4682509472827,22.5837340046826,25.1681417754544,23.3224033807771,21.8228231699511,12.5865107200237,16.3048944897932,8.00856507437251,6.09332884850929,5.39669069723649,7.1001042485976,7.23531479257251,8.40265310878685,13.5217184601881,9.89024883327716,4.94210543738547,30.1913233707445,24.5613025461212,22.1546747911338,16.6702059445094,13.2754086006215,20.7450714186248,89.4205440406367,20.6545638829828,23.9558515369778,23.424821836976,24.1730955737157,37.1863891520831,55.9402556082132,68.2967767502296,75.1919637386531,75.9623885495298,92.962130127315,91.4357296113818,70.9735275468831,80.858823747065,0,0,11.8023425524569,14.6246475541508,46.2385699164841,47.0018863234735,0,33.0736914637729,37.2299698911183,40.996068151147,30.5901224780574,45.88200920689,43.4457414460669,63.1260663659096,36.8377738524154,31.855888512333,43.0863677961711,55.5885877409726,27.2524963599876,27.6001685684246,31.7629570739473,29.8595922580289,2.65490276679926,19.4224508923985,19.9533547596736,14.3339860614483,21.2617362874156,21.5204603560749,22.4832615056352,27.2650297108129,22.8158322166222,18.3301319602773,9.48767477174989,13.4076206222643,10.8940673841212,42.6744792854205,23.6726391322441,26.792129378949,27.6650764481947,24.7932656466878,22.8723138636948,18.8768268451052,19.7124234773517,19.4885505194715,7.05690873775878,43.2001982706678,55.7052272100874,34.6799318336896,37.9604053929974,56.6286104120461,23.0269860937582,46.912601408659,6.66396435111626,49.120074575247,34.2609875633967,9.41842285023455,6.01454601972511,4.57556346413045,0.679913719975421,1.11961161858926,0.138199973804424,10.5013767981662,24.3578715057474,27.6514475292514,19.1169453254588,20.9088296014469,18.5608179184251,14.7002137559455,17.5225326137712,4.97336289769656,36.5514224682856,15.5334828271731,1.12738587736838,17.7924689792335,11.913011312911,10.6948153589226,8.00790905561933,7.7719817725758,11.0315804327009,7.81226309063701,3.25063967719704,0.724752362478018,3.74439008135225,2.21207784439725,17.0289180843738,12.4280258169441,4.54722880422283,5.54982756569192,4.96703386953162,3.00488623799922,2.80610101631697,2.1202954489111,1.82896335972,2.11734988787365,1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|short_description=p1@Sema6a
}}
}}

Latest revision as of 08:21, 27 September 2015

Short description:p1@Sema6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sema6a_5end
Coexpression cluster:MCL_coexpression_mm9:3146
Association with transcript: 0bp_to_ENSMUST00000115449, ENSMUST00000141224, ENSMUST00000151382, NM_018744, uc008ewa.1, uc008ewb.1, uc008ewc.1, uc008ewd.1_5end
EntrezGene:Sema6a
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Sema6a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.53
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C335.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C456.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C3100.15
Mouse Granule cells, donor2.CNhs12357.11731-123E3119.02
Mouse Granule cells, donor3.CNhs12108.11636-122C7135.64
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C838.65
Mouse Microglia, donor2.CNhs12634.11736-123E853.41
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.82
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1133.40
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5134.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D642.28
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D395.80
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F375.97
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D777.72
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D477.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.45
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D865.64
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E447.46
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I643.55
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6127.57
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F689.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E167.10
Mouse Schwann, donor1.CNhs12507.11728-123D914.09
Mouse Schwann, donor2.CNhs12573.11746-123F921.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3202.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F745.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F419.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.96
accessory axillary lymph node, adult.CNhs10475.1063-29H922.79
adrenal gland, adult.CNhs10508.49-24D710.84
adrenal gland, embryo E14.CNhs11038.406-44C514.92
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I115.45
adrenal gland, embryo E18.CNhs11026.1262-18F514.17
adrenal gland, neonate N00.CNhs11191.1311-23C117.17
adrenal gland, neonate N25.CNhs11223.1377-27I310.68
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H133.40
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F527.02
bone (os femoris), neonate N16.CNhs11225.1525-43A616.56
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B236.01
cerebellum, neonate N30.CNhs11135.1395-42I234.56
colon, adult.CNhs10468.36-18H715.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A459.92
corpus striatum, adult.CNhs10487.19-21D837.52
corpus striatum, neonate N00.CNhs11226.630-43F120.86
cortex, adult.CNhs10473.12-14D526.07
cortex, neonate N30.CNhs11107.1392-42F222.76
diencephalon, adult.CNhs10482.20-12F250.49
diencephalon, neonate N30.CNhs11201.1388-42B250.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.57
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G411.78
eyeball, embryo E12.CNhs11016.345-16C653.22
eyeball, embryo E14.CNhs10521.399-16E230.35
eyeball, embryo E15.CNhs10593.426-16C939.43
eyeball, embryo E17.CNhs11023.1261-18D437.53
eyeball, neonate N00.CNhs11207.633-15C638.37
eyeball, neonate N01.CNhs11140.1532-43E747.27
eyeball, neonate N02.CNhs11205.1551-44G843.38
eyeball, neonate N16.CNhs11188.777-19A234.92
forelimb, embryo E11.CNhs10596.335-25E236.22
forelimb, embryo E12.CNhs10600.359-14H277.34
forelimb, embryo E13.CNhs10589.384-1E299.06
forelimb, embryo E14.CNhs10577.413-26A848.00
forelimb, embryo E15.CNhs11007.437-20E757.83
forelimb, embryo E17.CNhs10598.1517-43C442.49
forelimb, embryo E18.CNhs11008.1520-43B536.01
gonad, embryo E13.CNhs11044.1564-45I632.44
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E96.84
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I99.36
heart, embryo E14.CNhs10597.403-26D414.68
heart, embryo E15.CNhs11017.431-16C810.82
heart, embryo E16.CNhs11021.457-17C614.50
heart, embryo E17.CNhs11025.479-18E512.09
heart, embryo E18.CNhs11030.1283-20G316.36
heart, neonate N00.CNhs11213.639-21E318.68
heart, neonate N03.CNhs11221.1349-25I217.44
heart, neonate N10.CNhs11118.749-24G135.30
heart, neonate N16.CNhs11209.782-15G145.64
heart, neonate N20.CNhs11127.821-26I638.45
heart, neonate N25.CNhs11196.1351-25D330.52
heart, neonate N30.CNhs11202.1390-42D242.41
hippocampus, adult.CNhs10478.13-16E824.18
hippocampus, neonate N00.CNhs11228.627-43G135.91
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A37.93
intestine, embryo E12.CNhs11019.1251-16I527.09
intestine, embryo E13.CNhs11010.381-16D538.55
intestine, embryo E15.CNhs10602.976-16D834.67
intestine, embryo E16.CNhs10585.463-22H430.25
intestine, embryo E17.CNhs10582.482-18D327.35
intestine, embryo E18.CNhs10526.1289-20F719.40
intestine, neonate N00.CNhs11126.644-26D126.10
intestine, neonate N01.CNhs11192.1322-23E931.29
intestine, neonate N06.CNhs11102.688-20B822.37
intestine, neonate N07.CNhs11095.720-20F220.89
intestine, neonate N10.CNhs11098.755-23A527.29
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E316.21
intestine, neonate N30.CNhs11131.1384-42G122.70
kidney, embryo E14.CNhs10606.411-4I920.10
kidney, embryo E15.CNhs10997.434-16F826.16
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I226.07
kidney, embryo E18.CNhs11001.1288-20C723.47
kidney, neonate N00.CNhs11214.646-21G722.58
kidney, neonate N10.CNhs11206.758-6D525.17
kidney, neonate N20.CNhs11113.832-19I123.32
kidney, neonate N25.CNhs11122.1353-25F321.82
kidney, neonate N30.CNhs11203.1385-42H112.59
liver, adult pregnant day01.CNhs10466.508-5B216.30
liver, embryo E12.CNhs10601.355-15F88.01
liver, embryo E13.CNhs10524.378-3H66.09
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D77.10
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F49.89
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H224.56
liver, neonate N10.CNhs11115.751-24B922.15
liver, neonate N20.CNhs11220.823-25A316.67
liver, neonate N25.CNhs11198.1368-26H113.28
liver, neonate N30.CNhs11106.1382-42D120.75
lung, adult.CNhs10474.28-22B189.42
lung, embryo E12.CNhs10522.354-16G220.65
lung, embryo E14.CNhs10604.404-26F823.96
lung, embryo E15.CNhs11020.432-17C523.42
lung, embryo E16.CNhs10998.458-17B624.17
lung, embryo E17.CNhs10605.480-44A637.19
lung, embryo E18.CNhs10583.1287-20I655.94
lung, neonate N00.CNhs11224.640-42C668.30
lung, neonate N06.CNhs11212.683-20E575.19
lung, neonate N07.CNhs11111.715-19A375.96
lung, neonate N10.CNhs11219.750-23E692.96
lung, neonate N20.CNhs11109.822-18A491.44
lung, neonate N25.CNhs11119.1359-25C770.97
lung, neonate N30.CNhs11133.1394-42H280.86
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H214.62
medulla oblongata, adult.CNhs10477.17-12C246.24
medulla oblongata, neonate N30.CNhs11200.1396-42A347.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C233.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E137.23
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E241.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E330.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D745.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D843.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D963.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D436.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D531.86
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D643.09
olfactory brain, adult.CNhs10489.18-22I955.59
ovary, adult.CNhs10507.91-2I727.25
ovary, embryo E18.CNhs11040.505-44H727.60
ovary, neonate N00.CNhs11217.1299-22I431.76
oviduct, adult pregnant day01.CNhs10500.988-6G629.86
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F419.42
pancreas, embryo E15.CNhs11042.1556-45F219.95
pancreas, embryo E16.CNhs11003.460-26E514.33
pancreas, embryo E17.CNhs10599.1558-45G321.26
pancreas, embryo E18.CNhs10580.1535-43I721.52
pancreas, neonate N00.CNhs11105.645-26G922.48
pancreas, neonate N01.CNhs11138.1531-43D727.27
pancreas, neonate N02.CNhs11139.1539-43D822.82
pancreas, neonate N16.CNhs11136.787-43B618.33
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E642.67
pituitary gland, embryo E13.CNhs11009.370-44C723.67
pituitary gland, embryo E14.CNhs11037.398-44A526.79
pituitary gland, embryo E15.CNhs10592.427-16B927.67
pituitary gland, embryo E16.CNhs11036.449-43F624.79
pituitary gland, embryo E17.CNhs11039.1265-44F522.87
pituitary gland, neonate N00.CNhs11190.1308-22E918.88
placenta, adult pregnant day10.CNhs10472.539-13I719.71
placenta, adult pregnant day17.CNhs10464.577-18G319.49
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C343.20
skin, neonate N00.CNhs11124.650-25G455.71
skin, neonate N03.CNhs11215.662-22H334.68
skin, neonate N06.CNhs11097.693-20I537.96
skin, neonate N10.CNhs11108.762-6C456.63
small intestine, neonate N16.CNhs11114.790-21I123.03
spinal cord, adult.CNhs10505.24-13C946.91
spleen, adult.CNhs10465.25-2G26.66
spleen, embryo E16.CNhs11035.461-43C149.12
spleen, embryo E18.CNhs11011.1271-21F234.26
spleen, neonate N10.CNhs11116.752-24D19.42
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E324.36
stomach, embryo E15.CNhs10603.1252-16G827.65
stomach, embryo E16.CNhs11022.459-17D419.12
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C618.56
stomach, neonate N03.CNhs11193.1340-24B814.70
stomach, neonate N07.CNhs11210.718-18A917.52
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I136.55
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F517.79
testis, embryo E15.CNhs11034.443-27C511.91
testis, embryo E16.CNhs11033.470-26G510.69
testis, embryo E17.CNhs11029.486-18I58.01
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B711.03
testis, neonate N07.CNhs11222.726-26I47.81
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I417.03
thymus, embryo E15.CNhs11005.430-45I212.43
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B424.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.23
urinary bladder, adult.CNhs10481.879-12E411.78
uterus, adult pregnant day19.CNhs10497.590-15F517.27
uterus, adult.CNhs10509.92-27E527.84
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A176.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A265.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A372.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D761.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A447.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.79
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.73
whole body, embryo E11.CNhs11014.324-5I822.21
whole body, embryo E12.CNhs10587.857-27C981.00
whole body, embryo E13.CNhs10512.372-23H247.12
whole body, embryo E14.5.CNhs10578.420-27D237.20
whole body, embryo E14.CNhs10519.395-14B119.28
whole body, embryo E16.CNhs10514.453-14F217.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G535.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G540.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G539.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G537.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G536.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G536.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G535.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G540.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.48
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G528.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.72
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.72
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.56
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.21
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G531.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G532.49
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G534.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G542.65
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G541.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G532.33
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.82
whole body, embryo E17.5.CNhs10513.490-9F937.23
whole body, embryo E17.CNhs10517.475-3I538.72
whole body, embryo E18.CNhs10516.493-3B335.32
whole body, neonate N00.CNhs10525.657-19C237.17
whole body, neonate N01.CNhs10576.659-23C633.48
whole body, neonate N06.CNhs10515.692-21D130.66
whole body, neonate N10.CNhs10518.761-6B433.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.87e-1233
neuronal stem cell9.87e-1233
neuroblast9.87e-1233
electrically signaling cell9.87e-1233
ectodermal cell1.46e-1144
neurectodermal cell1.46e-1144
neural cell1.55e-1143
CNS neuron (sensu Vertebrata)3.62e-0923
neuroblast (sensu Vertebrata)3.62e-0923
electrically responsive cell1.21e-0839
electrically active cell1.21e-0839

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.22e-2195
ectoderm1.22e-2195
presumptive ectoderm1.22e-2195
central nervous system4.85e-1973
nervous system1.70e-1875
ecto-epithelium5.63e-1573
neurectoderm1.24e-1364
neural plate1.24e-1364
presumptive neural plate1.24e-1364
regional part of nervous system5.01e-1254
neural tube8.14e-1152
neural rod8.14e-1152
future spinal cord8.14e-1152
neural keel8.14e-1152
structure with developmental contribution from neural crest2.32e-0992
embryo5.23e-09320
pre-chordal neural plate6.35e-0949
gray matter8.43e-0934
brain3.09e-0847
future brain3.09e-0847
tube5.02e-08114
regional part of brain7.89e-0846
anatomical conduit3.06e-07122
anterior neural tube4.91e-0740
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