FFCP PHASE1:Mm9::chr3:115590973..115591000,-: Difference between revisions
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{{FFCP|EntrezGene=68161|HGNC=|MCL_coexpression_id=40|UniProt=|association_with_transcript=0bp_to_NR_027894,uc008rbp.2,uc012cwo.1_5end|description=CAGE_peak_2_at_A930005H10Rik_5end|id=chr3:115590973..115591000,-|ontology_enrichment_celltype=CL:0000144!3.05e-19!121;CL:0000012!3.05e-19!121;CL:0000548!4.39e-19!115;CL:0000004!4.39e-19!115;CL:0000255!4.39e-19!115;CL:0000723!7.41e-18!91;CL:0000048!7.41e-18!91;CL:0002371!8.41e-18!118;CL:0000034!3.32e-17!97;CL:0000221!1.54e-12!44;CL:0000133!1.54e-12!44;CL:0002319!3.61e-12!43;CL:0000219!4.42e-12!54;CL:0002321!9.94e-12!70;CL:0000220!9.94e-12!70;CL:0000055!4.79e-11!50;CL:0002320!8.70e-11!46;CL:0000134!8.70e-11!46;CL:0000540!7.60e-10!33;CL:0000047!7.60e-10!33;CL:0000031!7.60e-10!33;CL:0000404!7.60e-10!33;CL:0000393!1.35e-09!39;CL:0000211!1.35e-09!39;CL:0000063!3.23e-09!66;CL:0000117!6.54e-09!23;CL:0000337!6.54e-09!23;CL:0000988!1.47e-08!32;CL:0002032!1.47e-08!32;CL:0000037!1.47e-08!32;CL:0000566!1.47e-08!32;CL:0000837!1.47e-08!32;CL:0002031!4.49e-08!25;CL:0000838!6.11e-07!12;CL:0000738!6.77e-07!17;CL:0002087!6.77e-07!17|ontology_enrichment_celltype_v019_2=CL:0000723,2.77e-18,91;CL:0000048,2.77e-18,91;CL:0000034,7.44e-18,97;CL:0000221,9.79e-13,44;CL:0000133,9.79e-13,44;CL:0000219,1.43e-12,54;CL:0002319,2.32e-12,43;CL:0002321,5.68e-12,70;CL:0002320,3.57e-11,46;CL:0000134,3.57e-11,46;CL:0000540,6.45e-10,33;CL:0000047,6.45e-10,33;CL:0000031,6.45e-10,33;CL:0000404,6.45e-10,33;CL:0000393,1.15e-09,39;CL:0000211,1.15e-09,39;CL:0000117,5.66e-09,23;CL:0000337,5.66e-09,23;CL:0000988,8.68e-09,32;CL:0002032,8.68e-09,32;CL:0000037,8.68e-09,32;CL:0000837,8.68e-09,32;CL:0002031,2.58e-08,25;CL:0000838,5.49e-07,12;CL:0000738,6.08e-07,17;CL:0002087,6.08e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.09e-14!48;UBERON:0002390!1.10e-13!45;UBERON:0003061!1.10e-13!45;UBERON:0001017!4.16e-11!73;UBERON:0005743!4.16e-11!73;UBERON:0002384!8.70e-11!46;UBERON:0007811!1.11e-10!86;UBERON:0000477!1.11e-10!154;UBERON:0002370!4.38e-10!23;UBERON:0000974!4.38e-10!23;UBERON:0004807!4.38e-10!23;UBERON:0005058!4.38e-10!23;UBERON:0003351!4.38e-10!23;UBERON:0009113!4.38e-10!23;UBERON:0003295!4.38e-10!23;UBERON:0009722!4.38e-10!23;UBERON:0005562!4.38e-10!23;UBERON:0007690!4.38e-10!23;UBERON:0003408!4.79e-10!24;UBERON:0000073!7.31e-10!75;UBERON:0001016!7.31e-10!75;UBERON:0004177!8.82e-10!29;UBERON:0006562!1.38e-09!24;UBERON:0001557!1.38e-09!24;UBERON:0001042!1.38e-09!24;UBERON:0008814!1.38e-09!24;UBERON:0009145!1.38e-09!24;UBERON:0002405!2.70e-08!70;UBERON:0000153!3.72e-08!94;UBERON:0000072!3.79e-08!27;UBERON:0000063!1.34e-07!35;UBERON:0003081!1.60e-07!88;UBERON:0000064!3.44e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.96e-15,48;UBERON:0002405,7.96e-15,48;UBERON:0002390,8.15e-14,45;UBERON:0003061,8.15e-14,45;UBERON:0002384,3.57e-11,46;UBERON:0001017,4.96e-11,73;UBERON:0002370,3.70e-10,23;UBERON:0000974,3.70e-10,23;UBERON:0004807,3.70e-10,23;UBERON:0005058,3.70e-10,23;UBERON:0003351,3.70e-10,23;UBERON:0009113,3.70e-10,23;UBERON:0003295,3.70e-10,23;UBERON:0009722,3.70e-10,23;UBERON:0005562,3.70e-10,23;UBERON:0007690,3.70e-10,23;UBERON:0003408,4.05e-10,24;UBERON:0001016,7.39e-10,75;UBERON:0004177,7.50e-10,29;UBERON:0005057,7.50e-10,29;UBERON:0006562,1.17e-09,24;UBERON:0001557,1.17e-09,24;UBERON:0001042,1.17e-09,24;UBERON:0008814,1.17e-09,24;UBERON:0009145,1.17e-09,24;UBERON:0000077,1.38e-08,35;UBERON:0000072,3.32e-08,27;UBERON:0003081,1.73e-07,87|phase1_expression=2.5623815536767,0,1.81999695755814,1.81478526784098,2.00358291978539,1.6787927191189,2.56973904655078,36.8001471808492,7.46180227403834,14.7460651582856,2.73948749160808,2.79202556483677,36.636956205278,52.4522414513984,5.3297561890506,2.83465374345756,0.699561878128147,22.0823515750766,23.5836825801871,12.3072999021429,2.97651515528744,2.6808556824239,4.4403964153619,2.87986361028132,2.98232065387321,1.14846392823004,3.01533397311352,2.37018355954478,2.47030445293286,2.01624103807945,1.33038306393183,4.44521471421742,2.46025915033828,0,0.866554859253824,1.49611180822643,1.42918549383658,0.837063261473815,2.3440060335714,0.523523743973798,1.76469446409304,1.36609096991689,2.42755176515577,3.02152363141385,3.4468156614635,2.0190142737785,6.25913075478431,9.3750817243592,7.24964403023757,7.19390626574849,6.7193482380174,5.75010257459886,9.2280433331755,34.0920206745332,33.6093799142464,1.80081605225163,1.43266719969378,2.57836046138721,2.83243045203437,6.34789175126439,4.43681982454325,2.37191172448392,2.66788438833342,6.29929802096979,3.9554654502679,6.3943210345149,13.1824048628098,21.9004434033286,2.7996195323289,4.86021377994086,3.36519938162211,9.99778445413313,6.84692476950002,2.44981598429908,3.1629005436018,4.5960939330501,11.0115880999389,3.70293280447044,6.45147439676223,2.1101806036831,3.38504281328916,3.12548022334056,6.42120897703176,7.31591393041184,6.41752640662602,9.42811473515737,6.69146899755784,2.60959224155421,0.37863096666592,0.755715601067855,5.21756079663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t_description=p2@A930005H10Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68161 | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_027894,uc008rbp.2,uc012cwo.1_5end | |||
|cluster_id=chr3:115590973..115591000,- | |||
|description=CAGE_peak_2_at_A930005H10Rik_5end | |||
|id=chr3:115590973..115591000,- | |||
|ontology_enrichment_celltype=CL:0000144!3.05e-19!121;CL:0000012!3.05e-19!121;CL:0000548!4.39e-19!115;CL:0000004!4.39e-19!115;CL:0000255!4.39e-19!115;CL:0000723!7.41e-18!91;CL:0000048!7.41e-18!91;CL:0002371!8.41e-18!118;CL:0000034!3.32e-17!97;CL:0000221!1.54e-12!44;CL:0000133!1.54e-12!44;CL:0002319!3.61e-12!43;CL:0000219!4.42e-12!54;CL:0002321!9.94e-12!70;CL:0000220!9.94e-12!70;CL:0000055!4.79e-11!50;CL:0002320!8.70e-11!46;CL:0000134!8.70e-11!46;CL:0000540!7.60e-10!33;CL:0000047!7.60e-10!33;CL:0000031!7.60e-10!33;CL:0000404!7.60e-10!33;CL:0000393!1.35e-09!39;CL:0000211!1.35e-09!39;CL:0000063!3.23e-09!66;CL:0000117!6.54e-09!23;CL:0000337!6.54e-09!23;CL:0000988!1.47e-08!32;CL:0002032!1.47e-08!32;CL:0000037!1.47e-08!32;CL:0000566!1.47e-08!32;CL:0000837!1.47e-08!32;CL:0002031!4.49e-08!25;CL:0000838!6.11e-07!12;CL:0000738!6.77e-07!17;CL:0002087!6.77e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,2.77e-18,91;CL:0000048,2.77e-18,91;CL:0000034,7.44e-18,97;CL:0000221,9.79e-13,44;CL:0000133,9.79e-13,44;CL:0000219,1.43e-12,54;CL:0002319,2.32e-12,43;CL:0002321,5.68e-12,70;CL:0002320,3.57e-11,46;CL:0000134,3.57e-11,46;CL:0000540,6.45e-10,33;CL:0000047,6.45e-10,33;CL:0000031,6.45e-10,33;CL:0000404,6.45e-10,33;CL:0000393,1.15e-09,39;CL:0000211,1.15e-09,39;CL:0000117,5.66e-09,23;CL:0000337,5.66e-09,23;CL:0000988,8.68e-09,32;CL:0002032,8.68e-09,32;CL:0000037,8.68e-09,32;CL:0000837,8.68e-09,32;CL:0002031,2.58e-08,25;CL:0000838,5.49e-07,12;CL:0000738,6.08e-07,17;CL:0002087,6.08e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.09e-14!48;UBERON:0002390!1.10e-13!45;UBERON:0003061!1.10e-13!45;UBERON:0001017!4.16e-11!73;UBERON:0005743!4.16e-11!73;UBERON:0002384!8.70e-11!46;UBERON:0007811!1.11e-10!86;UBERON:0000477!1.11e-10!154;UBERON:0002370!4.38e-10!23;UBERON:0000974!4.38e-10!23;UBERON:0004807!4.38e-10!23;UBERON:0005058!4.38e-10!23;UBERON:0003351!4.38e-10!23;UBERON:0009113!4.38e-10!23;UBERON:0003295!4.38e-10!23;UBERON:0009722!4.38e-10!23;UBERON:0005562!4.38e-10!23;UBERON:0007690!4.38e-10!23;UBERON:0003408!4.79e-10!24;UBERON:0000073!7.31e-10!75;UBERON:0001016!7.31e-10!75;UBERON:0004177!8.82e-10!29;UBERON:0006562!1.38e-09!24;UBERON:0001557!1.38e-09!24;UBERON:0001042!1.38e-09!24;UBERON:0008814!1.38e-09!24;UBERON:0009145!1.38e-09!24;UBERON:0002405!2.70e-08!70;UBERON:0000153!3.72e-08!94;UBERON:0000072!3.79e-08!27;UBERON:0000063!1.34e-07!35;UBERON:0003081!1.60e-07!88;UBERON:0000064!3.44e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.96e-15,48;UBERON:0002405,7.96e-15,48;UBERON:0002390,8.15e-14,45;UBERON:0003061,8.15e-14,45;UBERON:0002384,3.57e-11,46;UBERON:0001017,4.96e-11,73;UBERON:0002370,3.70e-10,23;UBERON:0000974,3.70e-10,23;UBERON:0004807,3.70e-10,23;UBERON:0005058,3.70e-10,23;UBERON:0003351,3.70e-10,23;UBERON:0009113,3.70e-10,23;UBERON:0003295,3.70e-10,23;UBERON:0009722,3.70e-10,23;UBERON:0005562,3.70e-10,23;UBERON:0007690,3.70e-10,23;UBERON:0003408,4.05e-10,24;UBERON:0001016,7.39e-10,75;UBERON:0004177,7.50e-10,29;UBERON:0005057,7.50e-10,29;UBERON:0006562,1.17e-09,24;UBERON:0001557,1.17e-09,24;UBERON:0001042,1.17e-09,24;UBERON:0008814,1.17e-09,24;UBERON:0009145,1.17e-09,24;UBERON:0000077,1.38e-08,35;UBERON:0000072,3.32e-08,27;UBERON:0003081,1.73e-07,87 | |||
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| |||
|short_description=p2@A930005H10Rik | |||
}} |
Latest revision as of 08:58, 27 September 2015
Short description: | p2@A930005H10Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_A930005H10Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | 0bp_to_NR_027894, uc008rbp.2, uc012cwo.1_5end |
EntrezGene: | A930005H10Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 2.77e-18 | 91 |
multi fate stem cell | 2.77e-18 | 91 |
stem cell | 7.44e-18 | 97 |
ectodermal cell | 9.79e-13 | 44 |
neurectodermal cell | 9.79e-13 | 44 |
motile cell | 1.43e-12 | 54 |
neural cell | 2.32e-12 | 43 |
embryonic cell | 5.68e-12 | 70 |
connective tissue cell | 3.57e-11 | 46 |
mesenchymal cell | 3.57e-11 | 46 |
neuron | 6.45e-10 | 33 |
neuronal stem cell | 6.45e-10 | 33 |
neuroblast | 6.45e-10 | 33 |
electrically signaling cell | 6.45e-10 | 33 |
electrically responsive cell | 1.15e-09 | 39 |
electrically active cell | 1.15e-09 | 39 |
CNS neuron (sensu Vertebrata) | 5.66e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.66e-09 | 23 |
hematopoietic cell | 8.68e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.68e-09 | 32 |
hematopoietic stem cell | 8.68e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.68e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 2.58e-08 | 25 |
lymphoid lineage restricted progenitor cell | 5.49e-07 | 12 |
leukocyte | 6.08e-07 | 17 |
nongranular leukocyte | 6.08e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.96e-15 | 48 |
immune system | 7.96e-15 | 48 |
hematopoietic system | 8.15e-14 | 45 |
blood island | 8.15e-14 | 45 |
connective tissue | 3.57e-11 | 46 |
central nervous system | 4.96e-11 | 73 |
thymus | 3.70e-10 | 23 |
neck | 3.70e-10 | 23 |
respiratory system epithelium | 3.70e-10 | 23 |
hemolymphoid system gland | 3.70e-10 | 23 |
pharyngeal epithelium | 3.70e-10 | 23 |
thymic region | 3.70e-10 | 23 |
pharyngeal gland | 3.70e-10 | 23 |
entire pharyngeal arch endoderm | 3.70e-10 | 23 |
thymus primordium | 3.70e-10 | 23 |
early pharyngeal endoderm | 3.70e-10 | 23 |
gland of gut | 4.05e-10 | 24 |
nervous system | 7.39e-10 | 75 |
hemopoietic organ | 7.50e-10 | 29 |
immune organ | 7.50e-10 | 29 |
pharynx | 1.17e-09 | 24 |
upper respiratory tract | 1.17e-09 | 24 |
chordate pharynx | 1.17e-09 | 24 |
pharyngeal arch system | 1.17e-09 | 24 |
pharyngeal region of foregut | 1.17e-09 | 24 |
mixed endoderm/mesoderm-derived structure | 1.38e-08 | 35 |
segment of respiratory tract | 3.32e-08 | 27 |
lateral plate mesoderm | 1.73e-07 | 87 |