FFCP PHASE1:Mm9::chrX:132373579..132373614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=245607 | |EntrezGene=245607 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=483 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BUY8 | |UniProt=Q8BUY8 | ||
|association_with_transcript=0bp_to_ENSMUST00000113136_5end | |association_with_transcript=0bp_to_ENSMUST00000113136_5end | ||
|cluster_id=chrX:132373579..132373614,+ | |||
|description=CAGE_peak_1_at_Gprasp2_5end | |description=CAGE_peak_1_at_Gprasp2_5end | ||
|id=chrX:132373579..132373614,+ | |id=chrX:132373579..132373614,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.05e-14!33;CL:0000047!1.05e-14!33;CL:0000031!1.05e-14!33;CL:0000404!1.05e-14!33;CL:0000117!1.43e-13!23;CL:0000337!1.43e-13!23;CL:0000393!3.02e-10!39;CL:0000211!3.02e-10!39;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44;CL:0002319!2.46e-08!43 | |ontology_enrichment_celltype=CL:0000540!1.05e-14!33;CL:0000047!1.05e-14!33;CL:0000031!1.05e-14!33;CL:0000404!1.05e-14!33;CL:0000117!1.43e-13!23;CL:0000337!1.43e-13!23;CL:0000393!3.02e-10!39;CL:0000211!3.02e-10!39;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44;CL:0002319!2.46e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.90e-15,33;CL:0000047,2.90e-15,33;CL:0000031,2.90e-15,33;CL:0000404,2.90e-15,33;CL:0000117,4.42e-14,23;CL:0000337,4.42e-14,23;CL:0000393,1.17e-10,39;CL:0000211,1.17e-10,39;CL:0000221,9.61e-09,44;CL:0000133,9.61e-09,44;CL:0002319,2.24e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.14e-27!73;UBERON:0005743!5.14e-27!73;UBERON:0002346!1.74e-25!71;UBERON:0003075!1.74e-25!71;UBERON:0007284!1.74e-25!71;UBERON:0000073!3.09e-25!75;UBERON:0001016!3.09e-25!75;UBERON:0000033!8.01e-24!63;UBERON:0004121!1.50e-23!102;UBERON:0000924!1.50e-23!102;UBERON:0006601!1.50e-23!102;UBERON:0001049!3.81e-23!52;UBERON:0005068!3.81e-23!52;UBERON:0006241!3.81e-23!52;UBERON:0007135!3.81e-23!52;UBERON:0000955!5.10e-22!50;UBERON:0006238!5.10e-22!50;UBERON:0002616!2.05e-21!49;UBERON:0003056!6.85e-21!49;UBERON:0003080!7.52e-19!40;UBERON:0002780!4.00e-18!39;UBERON:0001890!4.00e-18!39;UBERON:0006240!4.00e-18!39;UBERON:0002020!6.40e-16!34;UBERON:0000153!4.57e-15!94;UBERON:0007811!1.14e-13!86;UBERON:0002791!6.98e-13!29;UBERON:0003528!6.98e-13!29;UBERON:0001893!6.98e-13!29;UBERON:0000468!1.96e-08!333;UBERON:0000956!5.32e-08!21;UBERON:0001869!5.32e-08!21;UBERON:0000203!5.32e-08!21 | |ontology_enrichment_uberon=UBERON:0001017!5.14e-27!73;UBERON:0005743!5.14e-27!73;UBERON:0002346!1.74e-25!71;UBERON:0003075!1.74e-25!71;UBERON:0007284!1.74e-25!71;UBERON:0000073!3.09e-25!75;UBERON:0001016!3.09e-25!75;UBERON:0000033!8.01e-24!63;UBERON:0004121!1.50e-23!102;UBERON:0000924!1.50e-23!102;UBERON:0006601!1.50e-23!102;UBERON:0001049!3.81e-23!52;UBERON:0005068!3.81e-23!52;UBERON:0006241!3.81e-23!52;UBERON:0007135!3.81e-23!52;UBERON:0000955!5.10e-22!50;UBERON:0006238!5.10e-22!50;UBERON:0002616!2.05e-21!49;UBERON:0003056!6.85e-21!49;UBERON:0003080!7.52e-19!40;UBERON:0002780!4.00e-18!39;UBERON:0001890!4.00e-18!39;UBERON:0006240!4.00e-18!39;UBERON:0002020!6.40e-16!34;UBERON:0000153!4.57e-15!94;UBERON:0007811!1.14e-13!86;UBERON:0002791!6.98e-13!29;UBERON:0003528!6.98e-13!29;UBERON:0001893!6.98e-13!29;UBERON:0000468!1.96e-08!333;UBERON:0000956!5.32e-08!21;UBERON:0001869!5.32e-08!21;UBERON:0000203!5.32e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.30e-28,73;UBERON:0002346,1.18e-26,64;UBERON:0003075,1.18e-26,64;UBERON:0007284,1.18e-26,64;UBERON:0001016,7.01e-26,75;UBERON:0000073,1.85e-25,54;UBERON:0001049,8.20e-24,52;UBERON:0005068,8.20e-24,52;UBERON:0006241,8.20e-24,52;UBERON:0007135,8.20e-24,52;UBERON:0010371,1.58e-22,73;UBERON:0004121,1.85e-22,95;UBERON:0000924,1.85e-22,95;UBERON:0006601,1.85e-22,95;UBERON:0010314,1.31e-21,92;UBERON:0003056,1.73e-21,49;UBERON:0000955,2.06e-20,47;UBERON:0006238,2.06e-20,47;UBERON:0002616,8.47e-20,46;UBERON:0003080,2.36e-19,40;UBERON:0002780,1.34e-18,39;UBERON:0001890,1.34e-18,39;UBERON:0006240,1.34e-18,39;UBERON:0002020,2.65e-16,34;UBERON:0003528,3.81e-13,29;UBERON:0002791,3.81e-13,29;UBERON:0001893,3.81e-13,29;UBERON:0000956,4.40e-08,21;UBERON:0001869,4.40e-08,21;UBERON:0000203,4.40e-08,21 | |||
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| ||
|short_description=p1@Gprasp2 | |short_description=p1@Gprasp2 | ||
}} | }} |
Latest revision as of 14:30, 1 October 2015
Short description: | p1@Gprasp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gprasp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:483 |
Association with transcript: | 0bp_to_ENSMUST00000113136_5end |
EntrezGene: | Gprasp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.90e-15 | 33 |
neuronal stem cell | 2.90e-15 | 33 |
neuroblast | 2.90e-15 | 33 |
electrically signaling cell | 2.90e-15 | 33 |
CNS neuron (sensu Vertebrata) | 4.42e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.42e-14 | 23 |
electrically responsive cell | 1.17e-10 | 39 |
electrically active cell | 1.17e-10 | 39 |
ectodermal cell | 9.61e-09 | 44 |
neurectodermal cell | 9.61e-09 | 44 |
neural cell | 2.24e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.30e-28 | 73 |
neurectoderm | 1.18e-26 | 64 |
neural plate | 1.18e-26 | 64 |
presumptive neural plate | 1.18e-26 | 64 |
nervous system | 7.01e-26 | 75 |
regional part of nervous system | 1.85e-25 | 54 |
neural tube | 8.20e-24 | 52 |
neural rod | 8.20e-24 | 52 |
future spinal cord | 8.20e-24 | 52 |
neural keel | 8.20e-24 | 52 |
ecto-epithelium | 1.58e-22 | 73 |
ectoderm-derived structure | 1.85e-22 | 95 |
ectoderm | 1.85e-22 | 95 |
presumptive ectoderm | 1.85e-22 | 95 |
structure with developmental contribution from neural crest | 1.31e-21 | 92 |
pre-chordal neural plate | 1.73e-21 | 49 |
brain | 2.06e-20 | 47 |
future brain | 2.06e-20 | 47 |
regional part of brain | 8.47e-20 | 46 |
anterior neural tube | 2.36e-19 | 40 |
regional part of forebrain | 1.34e-18 | 39 |
forebrain | 1.34e-18 | 39 |
future forebrain | 1.34e-18 | 39 |
gray matter | 2.65e-16 | 34 |
brain grey matter | 3.81e-13 | 29 |
regional part of telencephalon | 3.81e-13 | 29 |
telencephalon | 3.81e-13 | 29 |
cerebral cortex | 4.40e-08 | 21 |
cerebral hemisphere | 4.40e-08 | 21 |
pallium | 4.40e-08 | 21 |