FFCP PHASE1:Mm9::chrX:132373579..132373614,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chrX:132373579..132373614,+ to FFCP PHASE1:Mm9::chrX:132373579..132373614,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=245607 | |EntrezGene=245607 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=483 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BUY8 | |UniProt=Q8BUY8 | ||
|association_with_transcript=0bp_to_ENSMUST00000113136_5end | |||
|cluster_id=chrX:132373579..132373614,+ | |||
|description=CAGE_peak_1_at_Gprasp2_5end | |||
|id=chrX:132373579..132373614,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.05e-14!33;CL:0000047!1.05e-14!33;CL:0000031!1.05e-14!33;CL:0000404!1.05e-14!33;CL:0000117!1.43e-13!23;CL:0000337!1.43e-13!23;CL:0000393!3.02e-10!39;CL:0000211!3.02e-10!39;CL:0000221!1.08e-08!44;CL:0000133!1.08e-08!44;CL:0002319!2.46e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.90e-15,33;CL:0000047,2.90e-15,33;CL:0000031,2.90e-15,33;CL:0000404,2.90e-15,33;CL:0000117,4.42e-14,23;CL:0000337,4.42e-14,23;CL:0000393,1.17e-10,39;CL:0000211,1.17e-10,39;CL:0000221,9.61e-09,44;CL:0000133,9.61e-09,44;CL:0002319,2.24e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.14e-27!73;UBERON:0005743!5.14e-27!73;UBERON:0002346!1.74e-25!71;UBERON:0003075!1.74e-25!71;UBERON:0007284!1.74e-25!71;UBERON:0000073!3.09e-25!75;UBERON:0001016!3.09e-25!75;UBERON:0000033!8.01e-24!63;UBERON:0004121!1.50e-23!102;UBERON:0000924!1.50e-23!102;UBERON:0006601!1.50e-23!102;UBERON:0001049!3.81e-23!52;UBERON:0005068!3.81e-23!52;UBERON:0006241!3.81e-23!52;UBERON:0007135!3.81e-23!52;UBERON:0000955!5.10e-22!50;UBERON:0006238!5.10e-22!50;UBERON:0002616!2.05e-21!49;UBERON:0003056!6.85e-21!49;UBERON:0003080!7.52e-19!40;UBERON:0002780!4.00e-18!39;UBERON:0001890!4.00e-18!39;UBERON:0006240!4.00e-18!39;UBERON:0002020!6.40e-16!34;UBERON:0000153!4.57e-15!94;UBERON:0007811!1.14e-13!86;UBERON:0002791!6.98e-13!29;UBERON:0003528!6.98e-13!29;UBERON:0001893!6.98e-13!29;UBERON:0000468!1.96e-08!333;UBERON:0000956!5.32e-08!21;UBERON:0001869!5.32e-08!21;UBERON:0000203!5.32e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.30e-28,73;UBERON:0002346,1.18e-26,64;UBERON:0003075,1.18e-26,64;UBERON:0007284,1.18e-26,64;UBERON:0001016,7.01e-26,75;UBERON:0000073,1.85e-25,54;UBERON:0001049,8.20e-24,52;UBERON:0005068,8.20e-24,52;UBERON:0006241,8.20e-24,52;UBERON:0007135,8.20e-24,52;UBERON:0010371,1.58e-22,73;UBERON:0004121,1.85e-22,95;UBERON:0000924,1.85e-22,95;UBERON:0006601,1.85e-22,95;UBERON:0010314,1.31e-21,92;UBERON:0003056,1.73e-21,49;UBERON:0000955,2.06e-20,47;UBERON:0006238,2.06e-20,47;UBERON:0002616,8.47e-20,46;UBERON:0003080,2.36e-19,40;UBERON:0002780,1.34e-18,39;UBERON:0001890,1.34e-18,39;UBERON:0006240,1.34e-18,39;UBERON:0002020,2.65e-16,34;UBERON:0003528,3.81e-13,29;UBERON:0002791,3.81e-13,29;UBERON:0001893,3.81e-13,29;UBERON:0000956,4.40e-08,21;UBERON:0001869,4.40e-08,21;UBERON:0000203,4.40e-08,21 | |||
|phase1_expression=14.4133962394315,0,0,0,0,0.16787927191189,0,4.64843964389675,0,0.234064526321993,0,0.319088635981346,0.684802919724823,1.83582845079895,0,0,0,0.315462165358238,0.137114433605739,0,7.313722952992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,1.31790010585369,0.183546752161682,0,0.436050312760893,0.439372365468944,1.1665793944457,1.1198913730029,0,0,0,0,0,0,0.515672092277442,26.5034563726073,26.4495489636016,20.2826049121977,0.338844532069132,0,0,0,0,0.599200221036809,1.53687322128622,9.7468235569969,11.6105106965254,9.25429829946081,22.8520787523043,30.9215957332259,15.4338407010842,13.7059023556078,8.27296907949019,44.0463523997555,31.5387725070414,37.4799941145234,33.1034582202787,27.7207560115301,22.3992749339407,35.7354238721768,66.4059879837382,52.5625972352227,30.3467443037878,31.0370264142044,25.5367240780662,0.151452386666368,0.0755715601067855,2.02905142091174,0,0,0,0,0,0.702222100658759,0,0,0,13.8026551381147,0,0,0,0,0,0,0.5709193985953,0.258937883647172,6.67989625791711,6.24547176358089,4.56698217468212,3.92046345335299,4.82312449768392,4.70354828542819,2.89033160058254,0.247194967734374,0.433798070759735,0,2.10296904931632,0.220841518460394,0,0,22.5441213698891,18.6407569063975,0.255457055208591,0.479260498023681,1.19980546198682,0.508280908292259,47.7832139701384,29.7375391832107,31.1622793239904,19.468323861535,20.9686675010871,35.7395436642443,36.5042841902455,7.12875546952214,2.23932547098167,3.79084137650512,3.99839526184301,9.75903322220278,8.04657365517155,6.48223667299257,9.19299388797862,9.5251098811859,9.60852902136373,11.3379086717272,11.1242449417777,6.89817577385095,10.5899404893979,14.9558455539357,10.7405908889512,12.2340789659263,3.48252166522167,6.37924622864625,10.3497818745616,0,0,0,5.79952163099405,6.56672967947069,6.48223421259654,4.97163944728941,5.1158700254325,5.55361606394562,4.18561100550734,5.36546802799238,2.6856028744449,4.27855609775049,1.97000956894914,0.972825714550269,1.16959989940266,1.53685080703735,0.671032093801859,25.8656636733877,15.0240734073755,0.330418782983798,0.264450566663544,5.11891801284562,9.0572302025571,4.63922860759536,3.83198696784351,3.7804267453628,2.47293313946327,0.949058123089023,1.15289268306808,2.76468729680296,2.38747766449381,1.9496408711912,0.898819408654221,0.216138049874694,0.199141273254367,1.51734320762465,5.02693455482807,5.63538678365402,3.66572390121566,4.46090720485539,3.64706263429657,3.60448261608267,2.36176236767363,0.941992367048249,0.616985819609003,0,0.166845105716094,0.786235980452812,0.449724224769707,0.202860121388503,0.964708639009667,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.744281895337007,1.24815069245824,1.01031551178845,0.179397413521912,0,0.184753190166605,8.33762211790133,5.37784422258685,5.26209765903083,3.98973422090454,4.85768146581266,1.19021820443007,0.585400943573396,1.89162172927429,2.87904096543407,2.23236676120482,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0.827810238914197,31.1468144576316,38.3282215156504,0.163934945376675,0.757412781613119,5.67914794949262,5.85658116444958,9.90947629570875,5.73525115086125,6.23836287430704,7.35998980050964,5.26253912177363,9.64444331107329,10.2774822266096,22.4924921495265,6.24536374916382,9.79360820169904,7.81857404897165,6.10389454998381,0,9.22566417388929,4.23252979750651,3.20628635585027,3.54362271456927,3.3817866273832,1.80899805217755,3.63533729477506,3.20847640546249,1.26414703174326,2.10837217149998,0,35.405718998394,11.8840322060665,13.8413791647547,18.2186479776853,19.3300854670078,14.8046118609719,18.5940393280397,14.0053876592716,0.704015124191131,0,1.10264199027481,0.32977250588296,1.61464426695906,1.44751019827574,1.07435109602823,0.492422699235184,2.04036585640896,22.6218868452822,0.341741761595705,5.15967169908056,2.77791791054568,0.188368457004691,0.136694227721025,0.915112692826091,2.71965487990169,2.51912614182584,1.65839968565309,1.90934123603023,5.53587988766987,6.30290348093231,4.64422965533745,5.01811910434725,3.71216358368502,2.15782954215713,3.96736587481612,1.57053565190418,1.03691978633434,0.621339313086926,2.81846469342095,9.27002585472668,9.76205093696876,14.0004855607714,10.2036260547408,13.8544022902438,14.317583114782,14.8432998722103,13.421996086491,9.18019659138823,5.47257011889944,0.316011120628178,4.45995473638361,4.31386020092274,2.5984164595559,1.9692936523423,1.78813219303138,1.9231271923195,1.62458479892035,1.71642964911851,1.752756553065,1.81487133246313,0.877120926657772,1.44317762460494,1.8700304349051,0.453460767230423,0.443971906748129,0.269141569828427,0,1.35232715822533,0.375364950902364,3.11357761254351,1.71494703263253,0.501572104035363,16.942555278512,11.9684561491866,14.3223878359849,15.8104927756193,19.182310553578,15.8632718451837,20.2506750069542,21.6154177547626,15.406841905463,24.3347346523355,6.53860289780313,13.167820822234,10.2440163452481,7.77941494618541,7.54607385460736,5.1476182366004,4.000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|phase1_expression=14.4133962394315,0,0,0,0,0.16787927191189,0,4.64843964389675,0,0.234064526321993,0,0.319088635981346,0.684802919724823,1.83582845079895,0,0,0,0.315462165358238,0.137114433605739,0,7.313722952992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.00717454380462,1.31790010585369,0.183546752161682,0,0.436050312760893,0.439372365468944,1.1665793944457,1.1198913730029,0,0,0,0,0,0,0.515672092277442,26.5034563726073,26.4495489636016,20.2826049121977,0.338844532069132,0,0,0,0,0.599200221036809,1.53687322128622,9.7468235569969,11.6105106965254,9.25429829946081,22.8520787523043,30.9215957332259,15.4338407010842,13.7059023556078,8.27296907949019,44.0463523997555,31.5387725070414,37.4799941145234,33.1034582202787,27.7207560115301,22.3992749339407,35.7354238721768,66.4059879837382,52.5625972352227,30.3467443037878,31.0370264142044,25.5367240780662,0.151452386666368,0.0755715601067855,2.02905142091174,0,0,0,0,0,0.702222100658759,0,0,0,13.8026551381147,0,0,0,0,0,0,0.5709193985953,0.258937883647172,6.67989625791711,6.24547176358089,4.56698217468212,3.92046345335299,4.82312449768392,4.70354828542819,2.89033160058254,0.247194967734374,0.433798070759735,0,2.10296904931632,0.220841518460394,0,0,22.5441213698891,18.6407569063975,0.255457055208591,0.479260498023681,1.19980546198682,0.508280908292259,47.7832139701384,29.7375391832107,31.1622793239904,19.468323861535,20.9686675010871,35.7395436642443,36.5042841902455,7.12875546952214,2.23932547098167,3.79084137650512,3.99839526184301,9.75903322220278,8.04657365517155,6.48223667299257,9.19299388797862,9.5251098811859,9.60852902136373,11.3379086717272,11.1242449417777,6.89817577385095,10.5899404893979,14.9558455539357,10.7405908889512,12.2340789659263,3.48252166522167,6.37924622864625,10.3497818745616,0,0,0,5.79952163099405,6.56672967947069,6.48223421259654,4.97163944728941,5.1158700254325,5.55361606394562,4.18561100550734,5.36546802799238,2.6856028744449,4.27855609775049,1.97000956894914,0.972825714550269,1.16959989940266,1.53685080703735,0.671032093801859,25.8656636733877,15.0240734073755,0.330418782983798,0.264450566663544,5.11891801284562,9.0572302025571,4.63922860759536,3.83198696784351,3.7804267453628,2.47293313946327,0.949058123089023,1.15289268306808,2.76468729680296,2.38747766449381,1.9496408711912,0.898819408654221,0.216138049874694,0.199141273254367,1.51734320762465,5.02693455482807,5.63538678365402,3.66572390121566,4.46090720485539,3.64706263429657,3.60448261608267,2.36176236767363,0.941992367048249,0.616985819609003,0,0.166845105716094,0.786235980452812,0.449724224769707,0.202860121388503,0.964708639009667,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.744281895337007,1.24815069245824,1.01031551178845,0.179397413521912,0,0.184753190166605,8.33762211790133,5.37784422258685,5.26209765903083,3.98973422090454,4.85768146581266,1.19021820443007,0.585400943573396,1.89162172927429,2.87904096543407,2.23236676120482,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0.827810238914197,31.1468144576316,38.3282215156504,0.163934945376675,0.757412781613119,5.67914794949262,5.85658116444958,9.90947629570875,5.73525115086125,6.23836287430704,7.35998980050964,5.26253912177363,9.64444331107329,10.2774822266096,22.4924921495265,6.24536374916382,9.79360820169904,7.81857404897165,6.10389454998381,0,9.22566417388929,4.23252979750651,3.20628635585027,3.54362271456927,3.3817866273832,1.80899805217755,3.63533729477506,3.20847640546249,1.26414703174326,2.10837217149998,0,35.405718998394,11.8840322060665,13.8413791647547,18.2186479776853,19.3300854670078,14.8046118609719,18.5940393280397,14.0053876592716,0.704015124191131,0,1.10264199027481,0.32977250588296,1.61464426695906,1.44751019827574,1.07435109602823,0.492422699235184,2.04036585640896,22.6218868452822,0.341741761595705,5.15967169908056,2.77791791054568,0.188368457004691,0.136694227721025,0.915112692826091,2.71965487990169,2.51912614182584,1.65839968565309,1.90934123603023,5.53587988766987,6.30290348093231,4.64422965533745,5.01811910434725,3.71216358368502,2.15782954215713,3.96736587481612,1.57053565190418,1.03691978633434,0.621339313086926,2.81846469342095,9.27002585472668,9.76205093696876,14.0004855607714,10.2036260547408,13.8544022902438,14.317583114782,14.8432998722103,13.421996086491,9.18019659138823,5.47257011889944,0.316011120628178,4.45995473638361,4.31386020092274,2.5984164595559,1.9692936523423,1.78813219303138,1.9231271923195,1.62458479892035,1.71642964911851,1.752756553065,1.81487133246313,0.877120926657772,1.44317762460494,1.8700304349051,0.453460767230423,0.443971906748129,0.269141569828427,0,1.35232715822533,0.375364950902364,3.11357761254351,1.71494703263253,0.501572104035363,16.942555278512,11.9684561491866,14.3223878359849,15.8104927756193,19.182310553578,15.8632718451837,20.2506750069542,21.6154177547626,15.406841905463,24.3347346523355,6.53860289780313,13.167820822234,10.2440163452481,7.77941494618541,7.54607385460736,5.1476182366004,4.000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| ||
|short_description=p1@Gprasp2 | |||
}} | }} |
Latest revision as of 14:30, 1 October 2015
Short description: | p1@Gprasp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gprasp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:483 |
Association with transcript: | 0bp_to_ENSMUST00000113136_5end |
EntrezGene: | Gprasp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.90e-15 | 33 |
neuronal stem cell | 2.90e-15 | 33 |
neuroblast | 2.90e-15 | 33 |
electrically signaling cell | 2.90e-15 | 33 |
CNS neuron (sensu Vertebrata) | 4.42e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.42e-14 | 23 |
electrically responsive cell | 1.17e-10 | 39 |
electrically active cell | 1.17e-10 | 39 |
ectodermal cell | 9.61e-09 | 44 |
neurectodermal cell | 9.61e-09 | 44 |
neural cell | 2.24e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.30e-28 | 73 |
neurectoderm | 1.18e-26 | 64 |
neural plate | 1.18e-26 | 64 |
presumptive neural plate | 1.18e-26 | 64 |
nervous system | 7.01e-26 | 75 |
regional part of nervous system | 1.85e-25 | 54 |
neural tube | 8.20e-24 | 52 |
neural rod | 8.20e-24 | 52 |
future spinal cord | 8.20e-24 | 52 |
neural keel | 8.20e-24 | 52 |
ecto-epithelium | 1.58e-22 | 73 |
ectoderm-derived structure | 1.85e-22 | 95 |
ectoderm | 1.85e-22 | 95 |
presumptive ectoderm | 1.85e-22 | 95 |
structure with developmental contribution from neural crest | 1.31e-21 | 92 |
pre-chordal neural plate | 1.73e-21 | 49 |
brain | 2.06e-20 | 47 |
future brain | 2.06e-20 | 47 |
regional part of brain | 8.47e-20 | 46 |
anterior neural tube | 2.36e-19 | 40 |
regional part of forebrain | 1.34e-18 | 39 |
forebrain | 1.34e-18 | 39 |
future forebrain | 1.34e-18 | 39 |
gray matter | 2.65e-16 | 34 |
brain grey matter | 3.81e-13 | 29 |
regional part of telencephalon | 3.81e-13 | 29 |
telencephalon | 3.81e-13 | 29 |
cerebral cortex | 4.40e-08 | 21 |
cerebral hemisphere | 4.40e-08 | 21 |
pallium | 4.40e-08 | 21 |