Personal tools

FFCP PHASE1:Mm9::chr1:80755266..80755284,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=210293|HGNC=|UniProt=E9QM99,E9QLG5,E9Q8Q3,E9PW63,Q8BZN6,Q3T9E0|association_with_transcript=-138bp_to_ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000166732,ENSMUST00000169279,NM_175291,uc007brg.2,uc007bri.2_5end|description=CAGE_peak_6_at_Dock10_5end|id=chr1:80755266..80755284,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000791,2.46e-13,9;CL:0000789,2.46e-13,9;CL:0002420,2.46e-13,9;CL:0002419,2.46e-13,9;CL:0000790,2.46e-13,9;CL:0000624,1.69e-11,8;CL:0000084,1.23e-10,11;CL:0000827,1.23e-10,11;CL:0000838,1.27e-09,12;CL:0000542,9.07e-09,13;CL:0000051,9.07e-09,13;CL:0000893,2.27e-08,6;CL:0002489,2.27e-08,6;CL:0000898,2.27e-08,6;CL:0000809,2.27e-08,6;CL:0000810,2.27e-08,6;CL:0000895,2.27e-08,6;CL:0000808,2.27e-08,6;CL:0000894,2.27e-08,6;CL:0000806,2.27e-08,6;CL:0000807,2.27e-08,6;CL:0000805,2.27e-08,6;CL:0002425,2.27e-08,6;CL:0002436,2.27e-08,6;CL:0002427,2.27e-08,6;CL:0002428,2.27e-08,6;CL:0002429,2.27e-08,6;CL:0002433,2.27e-08,6;CL:0002431,2.27e-08,6;CL:0002432,2.27e-08,6;CL:0002610,4.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!4.73e-08!94;UBERON:0007811!1.37e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.74e-09,73;UBERON:0000073,2.50e-09,54;UBERON:0001016,4.41e-09,75;UBERON:0000955,8.27e-09,47;UBERON:0006238,8.27e-09,47;UBERON:0002616,8.77e-08,46;UBERON:0001049,1.51e-07,52;UBERON:0005068,1.51e-07,52;UBERON:0006241,1.51e-07,52;UBERON:0007135,1.51e-07,52;UBERON:0004684,4.93e-07,3;UBERON:0002275,4.93e-07,3|phase1_expression=0,0.348975407639361,0,0,0,0.33575854382378,0,1.93684985162364,2.956563165185,7.0219357896598,0.513653904676515,1.67521533890206,2.05440875917447,1.22388563386596,0,0.404950534779652,1.39912375625629,0,0.137114433605739,0.42438965179803,0.595303031057488,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,1.45072428402269,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,5.50579404996943,1.91531007127782,3.37934373163736,0.131886287730194,0,0,0.837548997004143,1.12552522006336,2.90316670775939,0.589257170947335,0.427115042397309,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,2.07150306917737,1.63286352971307,0.693941307064543,0.304465478312141,0.922461989024234,1.3565037649736,1.17588707135705,1.63366568728578,0,0,0.884610551949874,0.485300549842228,0.220841518460394,0,1.86391761218122,1.17112318804619,2.72280718857492,0,0.479260498023681,0,0.635351135365324,6.5907881338122,5.03250663100489,0.502617408451458,2.43354048269187,2.04572365864264,8.10373373782284,6.32740925964255,0.101839363850316,0.248813941220186,0,0,0,0.459804208866946,0.360124259610698,0.452114453507145,0.476255494059295,0.2562274405697,0.187403449119458,0.776110112217047,0.431135985865684,0,0,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0,6.30869845692382,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0.667134131534611,0.570676878337677,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.771494018793504,0.632365371242573,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.486405680325106,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.472905432318573,0,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0,6.90367536947505,10.9006868530749,0,0,0.315508219416257,0.390438744296638,2.15423397732799,0.238968797952552,0.891194696329576,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,7.71171159412337,0,0.35613120733451,0.81443479676788,0.329940245945071,1.32745138339963,0.485561272309963,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0.469343416127421,0,0,0.32977250588296,0.322928853391811,0.361877549568935,0.238744688006273,0.164140899745061,0,6.48988557036784,0.854354403989263,0,1.11116716421827,0.565105371014073,0.683471138605126,0.457556346413045,0,0.279902904647316,0.276399947608848,0,0.632671987162271,0.203319467126849,0.432021363287205,0.209088296014469,0.655087691238533,0.269728692769641,0.578574190077352,0,0,0.621339313086926,0,1.34564891439581,0,0.194451188344048,0.129159823477731,0.168956125490778,0.469428954583016,0.2604087696879,0,0,0,0.948033361884535,0.405450430580328,0.513554785824136,0.51968329191118,1.07416017400489,0.198681354781265,0.721172697119813,0.590758108698309,0.908698049533329,0.609654453239999,0.302478555410522,0.779663045918019,0.673482891482306,0.818138315270983,0,0,0,0,0,0.375364950902364,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,2.05524755931193,1.5107877947794,0.675022500231806,1.80128481289688,0,1.03552062350364,0.103787347584177,0,0.170733605754134,0.972426868273176,0.209613162627982,0.551530525350042,0.44449345560323,0.618105171716683,0.962757628775446,0.252697211763798,0,0.754505365544305,0.561849044819294,0.640251524048693,0.459483751644906,0,0.811190281613988,0.192909220463705,1.64834360321323,0.147198920134397,1.37147700954166,0.887379030796687,0.953744759789284,1.0174249164263,0.564656282491984,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.830445126869219,0.492522411877817,1.22769312950907,0.929621047115796,0.385813221962283,0.499621155875892,0,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p6@Dock10}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=210293
|HGNC=
|TSSclassifier=NA
|UniProt=E9QM99,E9QLG5,E9Q8Q3,E9PW63,Q8BZN6,Q3T9E0
|association_with_transcript=-138bp_to_ENSMUST00000077946,ENSMUST00000097681,ENSMUST00000166732,ENSMUST00000169279,NM_175291,uc007brg.2,uc007bri.2_5end
|cluster_id=chr1:80755266..80755284,-
|description=CAGE_peak_6_at_Dock10_5end
|id=chr1:80755266..80755284,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,2.46e-13,9;CL:0000789,2.46e-13,9;CL:0002420,2.46e-13,9;CL:0002419,2.46e-13,9;CL:0000790,2.46e-13,9;CL:0000624,1.69e-11,8;CL:0000084,1.23e-10,11;CL:0000827,1.23e-10,11;CL:0000838,1.27e-09,12;CL:0000542,9.07e-09,13;CL:0000051,9.07e-09,13;CL:0000893,2.27e-08,6;CL:0002489,2.27e-08,6;CL:0000898,2.27e-08,6;CL:0000809,2.27e-08,6;CL:0000810,2.27e-08,6;CL:0000895,2.27e-08,6;CL:0000808,2.27e-08,6;CL:0000894,2.27e-08,6;CL:0000806,2.27e-08,6;CL:0000807,2.27e-08,6;CL:0000805,2.27e-08,6;CL:0002425,2.27e-08,6;CL:0002436,2.27e-08,6;CL:0002427,2.27e-08,6;CL:0002428,2.27e-08,6;CL:0002429,2.27e-08,6;CL:0002433,2.27e-08,6;CL:0002431,2.27e-08,6;CL:0002432,2.27e-08,6;CL:0002610,4.93e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!4.73e-08!94;UBERON:0007811!1.37e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.74e-09,73;UBERON:0000073,2.50e-09,54;UBERON:0001016,4.41e-09,75;UBERON:0000955,8.27e-09,47;UBERON:0006238,8.27e-09,47;UBERON:0002616,8.77e-08,46;UBERON:0001049,1.51e-07,52;UBERON:0005068,1.51e-07,52;UBERON:0006241,1.51e-07,52;UBERON:0007135,1.51e-07,52;UBERON:0004684,4.93e-07,3;UBERON:0002275,4.93e-07,3
|phase1_expression=0,0.348975407639361,0,0,0,0.33575854382378,0,1.93684985162364,2.956563165185,7.0219357896598,0.513653904676515,1.67521533890206,2.05440875917447,1.22388563386596,0,0.404950534779652,1.39912375625629,0,0.137114433605739,0.42438965179803,0.595303031057488,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,1.45072428402269,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,5.50579404996943,1.91531007127782,3.37934373163736,0.131886287730194,0,0,0.837548997004143,1.12552522006336,2.90316670775939,0.589257170947335,0.427115042397309,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,2.07150306917737,1.63286352971307,0.693941307064543,0.304465478312141,0.922461989024234,1.3565037649736,1.17588707135705,1.63366568728578,0,0,0.884610551949874,0.485300549842228,0.220841518460394,0,1.86391761218122,1.17112318804619,2.72280718857492,0,0.479260498023681,0,0.635351135365324,6.5907881338122,5.03250663100489,0.502617408451458,2.43354048269187,2.04572365864264,8.10373373782284,6.32740925964255,0.101839363850316,0.248813941220186,0,0,0,0.459804208866946,0.360124259610698,0.452114453507145,0.476255494059295,0.2562274405697,0.187403449119458,0.776110112217047,0.431135985865684,0,0,0.219195732427575,0.556094498451196,0.696504333044333,0.411564272815887,0.398068533636986,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0,6.30869845692382,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0.667134131534611,0.570676878337677,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0,0.193952487167626,0.771494018793504,0.632365371242573,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.486405680325106,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.472905432318573,0,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0,6.90367536947505,10.9006868530749,0,0,0.315508219416257,0.390438744296638,2.15423397732799,0.238968797952552,0.891194696329576,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,7.71171159412337,0,0.35613120733451,0.81443479676788,0.329940245945071,1.32745138339963,0.485561272309963,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.329098041204242,0,0.469343416127421,0,0,0.32977250588296,0.322928853391811,0.361877549568935,0.238744688006273,0.164140899745061,0,6.48988557036784,0.854354403989263,0,1.11116716421827,0.565105371014073,0.683471138605126,0.457556346413045,0,0.279902904647316,0.276399947608848,0,0.632671987162271,0.203319467126849,0.432021363287205,0.209088296014469,0.655087691238533,0.269728692769641,0.578574190077352,0,0,0.621339313086926,0,1.34564891439581,0,0.194451188344048,0.129159823477731,0.168956125490778,0.469428954583016,0.2604087696879,0,0,0,0.948033361884535,0.405450430580328,0.513554785824136,0.51968329191118,1.07416017400489,0.198681354781265,0.721172697119813,0.590758108698309,0.908698049533329,0.609654453239999,0.302478555410522,0.779663045918019,0.673482891482306,0.818138315270983,0,0,0,0,0,0.375364950902364,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0.171853182343688,2.05524755931193,1.5107877947794,0.675022500231806,1.80128481289688,0,1.03552062350364,0.103787347584177,0,0.170733605754134,0.972426868273176,0.209613162627982,0.551530525350042,0.44449345560323,0.618105171716683,0.962757628775446,0.252697211763798,0,0.754505365544305,0.561849044819294,0.640251524048693,0.459483751644906,0,0.811190281613988,0.192909220463705,1.64834360321323,0.147198920134397,1.37147700954166,0.887379030796687,0.953744759789284,1.0174249164263,0.564656282491984,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.830445126869219,0.492522411877817,1.22769312950907,0.929621047115796,0.385813221962283,0.499621155875892,0,0.859484216193193,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p6@Dock10
}}

Latest revision as of 16:01, 1 October 2015

Short description:p6@Dock10
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Dock10_5end
Coexpression cluster:NA
Association with transcript: -138bp_to_ENSMUST00000077946, ENSMUST00000097681, ENSMUST00000166732, ENSMUST00000169279, NM_175291, uc007brg.2, uc007bri.2_5end
EntrezGene:Dock10
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Dock10

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A310.90
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.46e-139
alpha-beta T cell2.46e-139
immature T cell2.46e-139
mature T cell2.46e-139
immature alpha-beta T cell2.46e-139
CD4-positive, alpha-beta T cell1.69e-118
T cell1.23e-1011
pro-T cell1.23e-1011
lymphoid lineage restricted progenitor cell1.27e-0912
lymphocyte9.07e-0913
common lymphoid progenitor9.07e-0913
thymocyte2.27e-086
double negative thymocyte2.27e-086
naive T cell2.27e-086
double-positive, alpha-beta thymocyte2.27e-086
CD4-positive, alpha-beta thymocyte2.27e-086
naive thymus-derived CD4-positive, alpha-beta T cell2.27e-086
DN4 thymocyte2.27e-086
DN1 thymic pro-T cell2.27e-086
DN2 thymocyte2.27e-086
DN3 thymocyte2.27e-086
immature single positive thymocyte2.27e-086
early T lineage precursor2.27e-086
mature CD4 single-positive thymocyte2.27e-086
resting double-positive thymocyte2.27e-086
double-positive blast2.27e-086
CD69-positive double-positive thymocyte2.27e-086
CD69-positive, CD4-positive single-positive thymocyte2.27e-086
CD4-positive, CD8-intermediate double-positive thymocyte2.27e-086
CD24-positive, CD4 single-positive thymocyte2.27e-086
raphe nuclei neuron4.93e-073

Uber anatomy
Ontology termp-valuen
central nervous system1.74e-0973
regional part of nervous system2.50e-0954
nervous system4.41e-0975
brain8.27e-0947
future brain8.27e-0947
regional part of brain8.77e-0846
neural tube1.51e-0752
neural rod1.51e-0752
future spinal cord1.51e-0752
neural keel1.51e-0752
raphe nuclei4.93e-073
reticular formation4.93e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:80755266..80755284,-&oldid=4310701"