FFCP PHASE1:Mm9::chr3:137806886..137806901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108943 | |EntrezGene=108943 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=102 | |MCL_coexpression_id=102 | ||
|TSSclassifier=NA | |||
|UniProt=E0CZ56 | |UniProt=E0CZ56 | ||
|association_with_transcript=12bp_to_ENSMUST00000161141_5end | |association_with_transcript=12bp_to_ENSMUST00000161141_5end | ||
|cluster_id=chr3:137806886..137806901,+ | |||
|description=CAGE_peak_5_at_Rg9mtd2_5end | |description=CAGE_peak_5_at_Rg9mtd2_5end | ||
|id=chr3:137806886..137806901,+ | |id=chr3:137806886..137806901,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.50e-09!12;CL:0000084!6.89e-09!11;CL:0000827!6.89e-09!11;CL:0000542!7.01e-09!13;CL:0000051!7.01e-09!13;CL:0000791!8.64e-08!9;CL:0000789!8.64e-08!9;CL:0002420!8.64e-08!9;CL:0002419!8.64e-08!9;CL:0000790!8.64e-08!9;CL:0000988!1.58e-07!32;CL:0002032!1.58e-07!32;CL:0000037!1.58e-07!32;CL:0000566!1.58e-07!32;CL:0000837!1.58e-07!32;CL:0000624!4.33e-07!8;CL:0000738!8.94e-07!17;CL:0002087!8.94e-07!17 | |ontology_enrichment_celltype=CL:0000838!1.50e-09!12;CL:0000084!6.89e-09!11;CL:0000827!6.89e-09!11;CL:0000542!7.01e-09!13;CL:0000051!7.01e-09!13;CL:0000791!8.64e-08!9;CL:0000789!8.64e-08!9;CL:0002420!8.64e-08!9;CL:0002419!8.64e-08!9;CL:0000790!8.64e-08!9;CL:0000988!1.58e-07!32;CL:0002032!1.58e-07!32;CL:0000037!1.58e-07!32;CL:0000566!1.58e-07!32;CL:0000837!1.58e-07!32;CL:0000624!4.33e-07!8;CL:0000738!8.94e-07!17;CL:0002087!8.94e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.05e-27,12;CL:0000084,2.89e-25,11;CL:0000827,2.89e-25,11;CL:0000542,4.49e-25,13;CL:0000051,4.49e-25,13;CL:0000791,1.03e-21,9;CL:0000789,1.03e-21,9;CL:0002420,1.03e-21,9;CL:0002419,1.03e-21,9;CL:0000790,1.03e-21,9;CL:0000624,1.87e-19,8;CL:0000738,1.80e-18,17;CL:0002087,1.80e-18,17;CL:0002031,3.58e-16,25;CL:0000988,1.85e-15,32;CL:0002032,1.85e-15,32;CL:0000037,1.85e-15,32;CL:0000837,1.85e-15,32;CL:0000893,6.14e-15,6;CL:0002489,6.14e-15,6;CL:0000898,6.14e-15,6;CL:0000809,6.14e-15,6;CL:0000810,6.14e-15,6;CL:0000895,6.14e-15,6;CL:0000808,6.14e-15,6;CL:0000894,6.14e-15,6;CL:0000806,6.14e-15,6;CL:0000807,6.14e-15,6;CL:0000805,6.14e-15,6;CL:0002425,6.14e-15,6;CL:0002436,6.14e-15,6;CL:0002427,6.14e-15,6;CL:0002428,6.14e-15,6;CL:0002429,6.14e-15,6;CL:0002433,6.14e-15,6;CL:0002431,6.14e-15,6;CL:0002432,6.14e-15,6;CL:0002320,5.28e-11,46;CL:0000134,5.28e-11,46;CL:0000219,5.39e-10,54;CL:0000034,5.78e-08,97;CL:0000723,4.49e-07,91;CL:0000048,4.49e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!9.24e-08!27;UBERON:0004177!1.51e-07!29;UBERON:0006562!2.62e-07!24;UBERON:0001557!2.62e-07!24;UBERON:0001042!2.62e-07!24;UBERON:0008814!2.62e-07!24;UBERON:0009145!2.62e-07!24;UBERON:0002370!3.48e-07!23;UBERON:0000974!3.48e-07!23;UBERON:0004807!3.48e-07!23;UBERON:0005058!3.48e-07!23;UBERON:0003351!3.48e-07!23;UBERON:0009113!3.48e-07!23;UBERON:0003295!3.48e-07!23;UBERON:0009722!3.48e-07!23;UBERON:0005562!3.48e-07!23;UBERON:0007690!3.48e-07!23 | |ontology_enrichment_uberon=UBERON:0000072!9.24e-08!27;UBERON:0004177!1.51e-07!29;UBERON:0006562!2.62e-07!24;UBERON:0001557!2.62e-07!24;UBERON:0001042!2.62e-07!24;UBERON:0008814!2.62e-07!24;UBERON:0009145!2.62e-07!24;UBERON:0002370!3.48e-07!23;UBERON:0000974!3.48e-07!23;UBERON:0004807!3.48e-07!23;UBERON:0005058!3.48e-07!23;UBERON:0003351!3.48e-07!23;UBERON:0009113!3.48e-07!23;UBERON:0003295!3.48e-07!23;UBERON:0009722!3.48e-07!23;UBERON:0005562!3.48e-07!23;UBERON:0007690!3.48e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.28e-11,46;UBERON:0002370,2.68e-08,23;UBERON:0000974,2.68e-08,23;UBERON:0004807,2.68e-08,23;UBERON:0005058,2.68e-08,23;UBERON:0003351,2.68e-08,23;UBERON:0009113,2.68e-08,23;UBERON:0003295,2.68e-08,23;UBERON:0009722,2.68e-08,23;UBERON:0005562,2.68e-08,23;UBERON:0007690,2.68e-08,23;UBERON:0006562,7.26e-08,24;UBERON:0003408,7.26e-08,24;UBERON:0001557,7.26e-08,24;UBERON:0001042,7.26e-08,24;UBERON:0008814,7.26e-08,24;UBERON:0009145,7.26e-08,24;UBERON:0000072,9.17e-07,27 | |||
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| ||
|short_description=p5@Rg9mtd2 | |short_description=p5@Rg9mtd2 | ||
}} | }} |
Latest revision as of 16:42, 1 October 2015
Short description: | p5@Rg9mtd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rg9mtd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | 12bp_to_ENSMUST00000161141_5end |
EntrezGene: | Rg9mtd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.28e-11 | 46 |
thymus | 2.68e-08 | 23 |
neck | 2.68e-08 | 23 |
respiratory system epithelium | 2.68e-08 | 23 |
hemolymphoid system gland | 2.68e-08 | 23 |
pharyngeal epithelium | 2.68e-08 | 23 |
thymic region | 2.68e-08 | 23 |
pharyngeal gland | 2.68e-08 | 23 |
entire pharyngeal arch endoderm | 2.68e-08 | 23 |
thymus primordium | 2.68e-08 | 23 |
early pharyngeal endoderm | 2.68e-08 | 23 |
pharynx | 7.26e-08 | 24 |
gland of gut | 7.26e-08 | 24 |
upper respiratory tract | 7.26e-08 | 24 |
chordate pharynx | 7.26e-08 | 24 |
pharyngeal arch system | 7.26e-08 | 24 |
pharyngeal region of foregut | 7.26e-08 | 24 |
segment of respiratory tract | 9.17e-07 | 27 |