FFCP PHASE1:Mm9::chr3:137806886..137806901,+: Difference between revisions
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{{FFCP|EntrezGene=108943|HGNC=|MCL_coexpression_id=102|UniProt=E0CZ56|association_with_transcript=12bp_to_ENSMUST00000161141_5end|description=CAGE_peak_5_at_Rg9mtd2_5end|id=chr3:137806886..137806901,+|ontology_enrichment_celltype=CL:0000838!1.50e-09!12;CL:0000084!6.89e-09!11;CL:0000827!6.89e-09!11;CL:0000542!7.01e-09!13;CL:0000051!7.01e-09!13;CL:0000791!8.64e-08!9;CL:0000789!8.64e-08!9;CL:0002420!8.64e-08!9;CL:0002419!8.64e-08!9;CL:0000790!8.64e-08!9;CL:0000988!1.58e-07!32;CL:0002032!1.58e-07!32;CL:0000037!1.58e-07!32;CL:0000566!1.58e-07!32;CL:0000837!1.58e-07!32;CL:0000624!4.33e-07!8;CL:0000738!8.94e-07!17;CL:0002087!8.94e-07!17|ontology_enrichment_celltype_v019_2=CL:0000838,2.05e-27,12;CL:0000084,2.89e-25,11;CL:0000827,2.89e-25,11;CL:0000542,4.49e-25,13;CL:0000051,4.49e-25,13;CL:0000791,1.03e-21,9;CL:0000789,1.03e-21,9;CL:0002420,1.03e-21,9;CL:0002419,1.03e-21,9;CL:0000790,1.03e-21,9;CL:0000624,1.87e-19,8;CL:0000738,1.80e-18,17;CL:0002087,1.80e-18,17;CL:0002031,3.58e-16,25;CL:0000988,1.85e-15,32;CL:0002032,1.85e-15,32;CL:0000037,1.85e-15,32;CL:0000837,1.85e-15,32;CL:0000893,6.14e-15,6;CL:0002489,6.14e-15,6;CL:0000898,6.14e-15,6;CL:0000809,6.14e-15,6;CL:0000810,6.14e-15,6;CL:0000895,6.14e-15,6;CL:0000808,6.14e-15,6;CL:0000894,6.14e-15,6;CL:0000806,6.14e-15,6;CL:0000807,6.14e-15,6;CL:0000805,6.14e-15,6;CL:0002425,6.14e-15,6;CL:0002436,6.14e-15,6;CL:0002427,6.14e-15,6;CL:0002428,6.14e-15,6;CL:0002429,6.14e-15,6;CL:0002433,6.14e-15,6;CL:0002431,6.14e-15,6;CL:0002432,6.14e-15,6;CL:0002320,5.28e-11,46;CL:0000134,5.28e-11,46;CL:0000219,5.39e-10,54;CL:0000034,5.78e-08,97;CL:0000723,4.49e-07,91;CL:0000048,4.49e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000072!9.24e-08!27;UBERON:0004177!1.51e-07!29;UBERON:0006562!2.62e-07!24;UBERON:0001557!2.62e-07!24;UBERON:0001042!2.62e-07!24;UBERON:0008814!2.62e-07!24;UBERON:0009145!2.62e-07!24;UBERON:0002370!3.48e-07!23;UBERON:0000974!3.48e-07!23;UBERON:0004807!3.48e-07!23;UBERON:0005058!3.48e-07!23;UBERON:0003351!3.48e-07!23;UBERON:0009113!3.48e-07!23;UBERON:0003295!3.48e-07!23;UBERON:0009722!3.48e-07!23;UBERON:0005562!3.48e-07!23;UBERON:0007690!3.48e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.28e-11,46;UBERON:0002370,2.68e-08,23;UBERON:0000974,2.68e-08,23;UBERON:0004807,2.68e-08,23;UBERON:0005058,2.68e-08,23;UBERON:0003351,2.68e-08,23;UBERON:0009113,2.68e-08,23;UBERON:0003295,2.68e-08,23;UBERON:0009722,2.68e-08,23;UBERON:0005562,2.68e-08,23;UBERON:0007690,2.68e-08,23;UBERON:0006562,7.26e-08,24;UBERON:0003408,7.26e-08,24;UBERON:0001557,7.26e-08,24;UBERON:0001042,7.26e-08,24;UBERON:0008814,7.26e-08,24;UBERON:0009145,7.26e-08,24;UBERON:0000072,9.17e-07,27|phase1_expression=0.320297694209588,0.697950815278722,0,0.90739263392049,1.00179145989269,0.503637815735669,0.700837921786577,10.4589891987677,8.869689495555,6.78787126333781,4.62288514208863,4.78632953972018,8.04643430676667,9.70366466850871,0.333109761815663,0,0,0.630924330716475,0.822686601634433,0.42438965179803,1.27564935226605,2.48227378002213,1.04479915655574,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0,6.35030673459631,1.84519436275371,0,1.44425809875637,0.332469290716985,1.22501613757421,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0,0.377690453926732,0.304130793658544,0.183546752161682,1.56478268869608,0,0.219686182734472,0,0.279972843250725,0,3.85899993932794,5.07753499407941,7.05796978199174,0,0,0,0,1.05798195854407,0,0.677689064138264,0,0,0,0,0,0.384218305321555,0.622137673850866,0.810035629990144,0,0.285650984403804,0,0.734944795289724,0.287536413054709,0,1.10115880999389,0.255374676170375,0.153606533256243,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0.37863096666592,0.453429360640713,2.89864488701678,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.79928715803342,0.517875767294343,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0,0,1.07833612055328,0,0.762421362438388,0,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0,0,0.252722758433675,0,0.910843100738926,0.919608417733892,0.720248519221397,1.35634336052144,1.08858398642125,0.2562274405697,0.562210347358373,0.258703370739016,0.431135985865684,1.13463648100692,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0,0.438599962275997,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.464473343720877,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,1.797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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108943 | |||
|HGNC= | |||
|MCL_coexpression_id=102 | |||
|TSSclassifier=NA | |||
|UniProt=E0CZ56 | |||
|association_with_transcript=12bp_to_ENSMUST00000161141_5end | |||
|cluster_id=chr3:137806886..137806901,+ | |||
|description=CAGE_peak_5_at_Rg9mtd2_5end | |||
|id=chr3:137806886..137806901,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.50e-09!12;CL:0000084!6.89e-09!11;CL:0000827!6.89e-09!11;CL:0000542!7.01e-09!13;CL:0000051!7.01e-09!13;CL:0000791!8.64e-08!9;CL:0000789!8.64e-08!9;CL:0002420!8.64e-08!9;CL:0002419!8.64e-08!9;CL:0000790!8.64e-08!9;CL:0000988!1.58e-07!32;CL:0002032!1.58e-07!32;CL:0000037!1.58e-07!32;CL:0000566!1.58e-07!32;CL:0000837!1.58e-07!32;CL:0000624!4.33e-07!8;CL:0000738!8.94e-07!17;CL:0002087!8.94e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.05e-27,12;CL:0000084,2.89e-25,11;CL:0000827,2.89e-25,11;CL:0000542,4.49e-25,13;CL:0000051,4.49e-25,13;CL:0000791,1.03e-21,9;CL:0000789,1.03e-21,9;CL:0002420,1.03e-21,9;CL:0002419,1.03e-21,9;CL:0000790,1.03e-21,9;CL:0000624,1.87e-19,8;CL:0000738,1.80e-18,17;CL:0002087,1.80e-18,17;CL:0002031,3.58e-16,25;CL:0000988,1.85e-15,32;CL:0002032,1.85e-15,32;CL:0000037,1.85e-15,32;CL:0000837,1.85e-15,32;CL:0000893,6.14e-15,6;CL:0002489,6.14e-15,6;CL:0000898,6.14e-15,6;CL:0000809,6.14e-15,6;CL:0000810,6.14e-15,6;CL:0000895,6.14e-15,6;CL:0000808,6.14e-15,6;CL:0000894,6.14e-15,6;CL:0000806,6.14e-15,6;CL:0000807,6.14e-15,6;CL:0000805,6.14e-15,6;CL:0002425,6.14e-15,6;CL:0002436,6.14e-15,6;CL:0002427,6.14e-15,6;CL:0002428,6.14e-15,6;CL:0002429,6.14e-15,6;CL:0002433,6.14e-15,6;CL:0002431,6.14e-15,6;CL:0002432,6.14e-15,6;CL:0002320,5.28e-11,46;CL:0000134,5.28e-11,46;CL:0000219,5.39e-10,54;CL:0000034,5.78e-08,97;CL:0000723,4.49e-07,91;CL:0000048,4.49e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!9.24e-08!27;UBERON:0004177!1.51e-07!29;UBERON:0006562!2.62e-07!24;UBERON:0001557!2.62e-07!24;UBERON:0001042!2.62e-07!24;UBERON:0008814!2.62e-07!24;UBERON:0009145!2.62e-07!24;UBERON:0002370!3.48e-07!23;UBERON:0000974!3.48e-07!23;UBERON:0004807!3.48e-07!23;UBERON:0005058!3.48e-07!23;UBERON:0003351!3.48e-07!23;UBERON:0009113!3.48e-07!23;UBERON:0003295!3.48e-07!23;UBERON:0009722!3.48e-07!23;UBERON:0005562!3.48e-07!23;UBERON:0007690!3.48e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.28e-11,46;UBERON:0002370,2.68e-08,23;UBERON:0000974,2.68e-08,23;UBERON:0004807,2.68e-08,23;UBERON:0005058,2.68e-08,23;UBERON:0003351,2.68e-08,23;UBERON:0009113,2.68e-08,23;UBERON:0003295,2.68e-08,23;UBERON:0009722,2.68e-08,23;UBERON:0005562,2.68e-08,23;UBERON:0007690,2.68e-08,23;UBERON:0006562,7.26e-08,24;UBERON:0003408,7.26e-08,24;UBERON:0001557,7.26e-08,24;UBERON:0001042,7.26e-08,24;UBERON:0008814,7.26e-08,24;UBERON:0009145,7.26e-08,24;UBERON:0000072,9.17e-07,27 | |||
|phase1_expression=0.320297694209588,0.697950815278722,0,0.90739263392049,1.00179145989269,0.503637815735669,0.700837921786577,10.4589891987677,8.869689495555,6.78787126333781,4.62288514208863,4.78632953972018,8.04643430676667,9.70366466850871,0.333109761815663,0,0,0.630924330716475,0.822686601634433,0.42438965179803,1.27564935226605,2.48227378002213,1.04479915655574,0.47997726838022,0.22940928106717,0,0,0.430942465371778,0.190023419456374,0.504060259519861,0,6.35030673459631,1.84519436275371,0,1.44425809875637,0.332469290716985,1.22501613757421,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0,0.377690453926732,0.304130793658544,0.183546752161682,1.56478268869608,0,0.219686182734472,0,0.279972843250725,0,3.85899993932794,5.07753499407941,7.05796978199174,0,0,0,0,1.05798195854407,0,0.677689064138264,0,0,0,0,0,0.384218305321555,0.622137673850866,0.810035629990144,0,0.285650984403804,0,0.734944795289724,0.287536413054709,0,1.10115880999389,0.255374676170375,0.153606533256243,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0.37863096666592,0.453429360640713,2.89864488701678,0,0.679971333707751,0.539703191637817,0,0,0.421333260395256,0.681721290312231,0.779358013808606,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.79928715803342,0.517875767294343,0.29688427812965,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0.585561594023094,0,0,1.07833612055328,0,0.762421362438388,0,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0,0,0.252722758433675,0,0.910843100738926,0.919608417733892,0.720248519221397,1.35634336052144,1.08858398642125,0.2562274405697,0.562210347358373,0.258703370739016,0.431135985865684,1.13463648100692,0.351902248327898,0,0.278047249225598,0,0.205782136407943,0,0.702213187313235,0.772043721344145,1.13665399758237,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0.32833492815819,0,0.438599962275997,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,0.264450566663544,0.213288250535234,0.464473343720877,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0,1.79763881730844,0,0,0.569003702859245,0.228497025219458,0,0.407302655690628,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0,0.296452627087149,0,0,0.449724224769707,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.568474235311454,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0.757412781613119,1.57754109708128,0.390438744296638,0.861693590931196,0.716906393857656,0.668396022247182,0.566153061577665,0.404810701674894,0.876767573733936,0.790575555893047,0.963963949265421,0.425820255624806,0.534196811001766,0.325773918707152,0.329940245945071,0,0,0.604647113929502,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,1.03135543248187,0.340439605753788,0.36012218806262,0.776152102696527,0.428674070063185,0.177340233642274,0.713475270408282,0.164549020602121,0.304464949114599,0,0.42366414172764,0.220528398054962,0.16488625294148,0.645857706783622,0.180938774784468,0.358117032009409,0.164140899745061,0,0.18542530201051,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.683471138605126,0.686334519619568,0.849892149969277,1.25956307091292,1.38199973804424,1.90934123603023,0.316335993581135,0,0.324016022465404,0,0.218362563746178,0.269728692769641,0,0.26175594198403,0,0,2.81846469342095,0.149516546043979,0.330916980914195,0,0.516639293910924,1.18269287843545,0.469428954583016,0.2604087696879,0.209718688851422,1.44950472495604,0.864090018773596,0.948033361884535,0.608175645870493,1.1298205288131,0.51968329191118,0.716106782669926,1.78813219303138,0.961563596159751,1.03382669022204,0.807731599585181,0.304827226619999,0.705783295957884,0.38983152295901,0.769694733122636,1.63627663054197,0.453460767230423,0.221985953374065,0.269141569828427,0.167884616364078,0,0,0.36630324853453,0.643105137237198,0,0,0,1.14579102687879,0.343706364687375,0,0,0,0.45032120322422,0,0,0.830298780673413,0,0.341467211508268,0,0,0,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.229741875822453,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p5@Rg9mtd2 | |||
}} |
Latest revision as of 16:42, 1 October 2015
Short description: | p5@Rg9mtd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rg9mtd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:102 |
Association with transcript: | 12bp_to_ENSMUST00000161141_5end |
EntrezGene: | Rg9mtd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.28e-11 | 46 |
thymus | 2.68e-08 | 23 |
neck | 2.68e-08 | 23 |
respiratory system epithelium | 2.68e-08 | 23 |
hemolymphoid system gland | 2.68e-08 | 23 |
pharyngeal epithelium | 2.68e-08 | 23 |
thymic region | 2.68e-08 | 23 |
pharyngeal gland | 2.68e-08 | 23 |
entire pharyngeal arch endoderm | 2.68e-08 | 23 |
thymus primordium | 2.68e-08 | 23 |
early pharyngeal endoderm | 2.68e-08 | 23 |
pharynx | 7.26e-08 | 24 |
gland of gut | 7.26e-08 | 24 |
upper respiratory tract | 7.26e-08 | 24 |
chordate pharynx | 7.26e-08 | 24 |
pharyngeal arch system | 7.26e-08 | 24 |
pharyngeal region of foregut | 7.26e-08 | 24 |
segment of respiratory tract | 9.17e-07 | 27 |