FFCP PHASE1:Mm9::chr8:126042743..126042828,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104346 | |EntrezGene=104346 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=695 | |||
|TSSclassifier=NA | |||
|UniProt=Q49MD7,Q60779,A1X3U7 | |UniProt=Q49MD7,Q60779,A1X3U7 | ||
|association_with_transcript=8bp_to_NM_018855,uc009nwj.1,uc009nwk.1_5end | |association_with_transcript=8bp_to_NM_018855,uc009nwj.1,uc009nwk.1_5end | ||
|cluster_id=chr8:126042743..126042828,+ | |||
|description=CAGE_peak_1_at_Gas8_5end | |description=CAGE_peak_1_at_Gas8_5end | ||
|id=chr8:126042743..126042828,+ | |id=chr8:126042743..126042828,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!5.32e-13!49;UBERON:0004121!8.44e-13!102;UBERON:0000924!8.44e-13!102;UBERON:0006601!8.44e-13!102;UBERON:0000073!8.60e-13!75;UBERON:0001016!8.60e-13!75;UBERON:0000033!1.41e-12!63;UBERON:0002346!2.76e-12!71;UBERON:0003075!2.76e-12!71;UBERON:0007284!2.76e-12!71;UBERON:0001017!3.37e-12!73;UBERON:0005743!3.37e-12!73;UBERON:0001049!1.87e-11!52;UBERON:0005068!1.87e-11!52;UBERON:0006241!1.87e-11!52;UBERON:0007135!1.87e-11!52;UBERON:0000955!3.87e-11!50;UBERON:0006238!3.87e-11!50;UBERON:0002616!9.10e-11!49;UBERON:0003080!9.11e-11!40;UBERON:0002780!2.02e-10!39;UBERON:0001890!2.02e-10!39;UBERON:0006240!2.02e-10!39;UBERON:0000153!1.31e-08!94;UBERON:0007811!5.14e-07!86 | |ontology_enrichment_uberon=UBERON:0003056!5.32e-13!49;UBERON:0004121!8.44e-13!102;UBERON:0000924!8.44e-13!102;UBERON:0006601!8.44e-13!102;UBERON:0000073!8.60e-13!75;UBERON:0001016!8.60e-13!75;UBERON:0000033!1.41e-12!63;UBERON:0002346!2.76e-12!71;UBERON:0003075!2.76e-12!71;UBERON:0007284!2.76e-12!71;UBERON:0001017!3.37e-12!73;UBERON:0005743!3.37e-12!73;UBERON:0001049!1.87e-11!52;UBERON:0005068!1.87e-11!52;UBERON:0006241!1.87e-11!52;UBERON:0007135!1.87e-11!52;UBERON:0000955!3.87e-11!50;UBERON:0006238!3.87e-11!50;UBERON:0002616!9.10e-11!49;UBERON:0003080!9.11e-11!40;UBERON:0002780!2.02e-10!39;UBERON:0001890!2.02e-10!39;UBERON:0006240!2.02e-10!39;UBERON:0000153!1.31e-08!94;UBERON:0007811!5.14e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.15e-14,73;UBERON:0004121,7.02e-14,95;UBERON:0000924,7.02e-14,95;UBERON:0006601,7.02e-14,95;UBERON:0002346,8.08e-14,64;UBERON:0003075,8.08e-14,64;UBERON:0007284,8.08e-14,64;UBERON:0003056,5.32e-13,49;UBERON:0001016,8.60e-13,75;UBERON:0001017,3.37e-12,73;UBERON:0000955,1.58e-11,47;UBERON:0006238,1.58e-11,47;UBERON:0001049,1.87e-11,52;UBERON:0005068,1.87e-11,52;UBERON:0006241,1.87e-11,52;UBERON:0007135,1.87e-11,52;UBERON:0002616,3.77e-11,46;UBERON:0000073,6.59e-11,54;UBERON:0003080,9.11e-11,40;UBERON:0002780,2.02e-10,39;UBERON:0001890,2.02e-10,39;UBERON:0006240,2.02e-10,39;UBERON:0010314,4.64e-08,92 | |||
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| ||
|short_description=p1@Gas8 | |short_description=p1@Gas8 | ||
}} | }} |
Latest revision as of 17:02, 1 October 2015
Short description: | p1@Gas8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gas8_5end |
Coexpression cluster: | MCL_coexpression_mm9:695 |
Association with transcript: | 8bp_to_NM_018855, uc009nwj.1, uc009nwk.1_5end |
EntrezGene: | Gas8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.15e-14 | 73 |
ectoderm-derived structure | 7.02e-14 | 95 |
ectoderm | 7.02e-14 | 95 |
presumptive ectoderm | 7.02e-14 | 95 |
neurectoderm | 8.08e-14 | 64 |
neural plate | 8.08e-14 | 64 |
presumptive neural plate | 8.08e-14 | 64 |
pre-chordal neural plate | 5.32e-13 | 49 |
nervous system | 8.60e-13 | 75 |
central nervous system | 3.37e-12 | 73 |
brain | 1.58e-11 | 47 |
future brain | 1.58e-11 | 47 |
neural tube | 1.87e-11 | 52 |
neural rod | 1.87e-11 | 52 |
future spinal cord | 1.87e-11 | 52 |
neural keel | 1.87e-11 | 52 |
regional part of brain | 3.77e-11 | 46 |
regional part of nervous system | 6.59e-11 | 54 |
anterior neural tube | 9.11e-11 | 40 |
regional part of forebrain | 2.02e-10 | 39 |
forebrain | 2.02e-10 | 39 |
future forebrain | 2.02e-10 | 39 |
structure with developmental contribution from neural crest | 4.64e-08 | 92 |