FFCP PHASE1:Mm9::chr13:51196179..51196302,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20729 | |EntrezGene=20729 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt=Q61142 | |UniProt=Q61142 | ||
|association_with_transcript=0bp_to_ENSMUST00000057478,NM_146043,uc007qly.1_5end | |association_with_transcript=0bp_to_ENSMUST00000057478,NM_146043,uc007qly.1_5end | ||
|cluster_id=chr13:51196179..51196302,+ | |||
|description=CAGE_peak_1_at_Spin1_5end | |description=CAGE_peak_1_at_Spin1_5end | ||
|id=chr13:51196179..51196302,+ | |id=chr13:51196179..51196302,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.23e-14!23;CL:0000337!1.23e-14!23;CL:0000540!5.87e-12!33;CL:0000047!5.87e-12!33;CL:0000031!5.87e-12!33;CL:0000404!5.87e-12!33;CL:0000393!1.91e-09!39;CL:0000211!1.91e-09!39;CL:0002321!2.41e-08!70;CL:0000220!2.41e-08!70;CL:0000221!3.42e-08!44;CL:0000133!3.42e-08!44;CL:0002319!8.49e-08!43 | |ontology_enrichment_celltype=CL:0000117!1.23e-14!23;CL:0000337!1.23e-14!23;CL:0000540!5.87e-12!33;CL:0000047!5.87e-12!33;CL:0000031!5.87e-12!33;CL:0000404!5.87e-12!33;CL:0000393!1.91e-09!39;CL:0000211!1.91e-09!39;CL:0002321!2.41e-08!70;CL:0000220!2.41e-08!70;CL:0000221!3.42e-08!44;CL:0000133!3.42e-08!44;CL:0002319!8.49e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-14,23;CL:0000337,1.23e-14,23;CL:0000540,5.87e-12,33;CL:0000047,5.87e-12,33;CL:0000031,5.87e-12,33;CL:0000404,5.87e-12,33;CL:0000393,1.91e-09,39;CL:0000211,1.91e-09,39;CL:0002321,2.41e-08,70;CL:0000221,3.42e-08,44;CL:0000133,3.42e-08,44;CL:0002319,8.49e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.63e-15!34;UBERON:0001017!7.29e-14!73;UBERON:0005743!7.29e-14!73;UBERON:0000073!1.75e-13!75;UBERON:0001016!1.75e-13!75;UBERON:0001049!1.87e-13!52;UBERON:0005068!1.87e-13!52;UBERON:0006241!1.87e-13!52;UBERON:0007135!1.87e-13!52;UBERON:0002346!5.24e-13!71;UBERON:0003075!5.24e-13!71;UBERON:0007284!5.24e-13!71;UBERON:0003080!4.03e-12!40;UBERON:0003056!4.22e-12!49;UBERON:0002780!7.89e-12!39;UBERON:0001890!7.89e-12!39;UBERON:0006240!7.89e-12!39;UBERON:0002616!8.15e-12!49;UBERON:0002791!8.45e-12!29;UBERON:0003528!8.45e-12!29;UBERON:0001893!8.45e-12!29;UBERON:0000033!1.20e-11!63;UBERON:0004121!1.25e-11!102;UBERON:0000924!1.25e-11!102;UBERON:0006601!1.25e-11!102;UBERON:0000955!1.57e-11!50;UBERON:0006238!1.57e-11!50;UBERON:0000956!8.81e-08!21;UBERON:0001869!8.81e-08!21;UBERON:0000203!8.81e-08!21;UBERON:0000153!1.26e-07!94;UBERON:0007811!4.03e-07!86 | |ontology_enrichment_uberon=UBERON:0002020!7.63e-15!34;UBERON:0001017!7.29e-14!73;UBERON:0005743!7.29e-14!73;UBERON:0000073!1.75e-13!75;UBERON:0001016!1.75e-13!75;UBERON:0001049!1.87e-13!52;UBERON:0005068!1.87e-13!52;UBERON:0006241!1.87e-13!52;UBERON:0007135!1.87e-13!52;UBERON:0002346!5.24e-13!71;UBERON:0003075!5.24e-13!71;UBERON:0007284!5.24e-13!71;UBERON:0003080!4.03e-12!40;UBERON:0003056!4.22e-12!49;UBERON:0002780!7.89e-12!39;UBERON:0001890!7.89e-12!39;UBERON:0006240!7.89e-12!39;UBERON:0002616!8.15e-12!49;UBERON:0002791!8.45e-12!29;UBERON:0003528!8.45e-12!29;UBERON:0001893!8.45e-12!29;UBERON:0000033!1.20e-11!63;UBERON:0004121!1.25e-11!102;UBERON:0000924!1.25e-11!102;UBERON:0006601!1.25e-11!102;UBERON:0000955!1.57e-11!50;UBERON:0006238!1.57e-11!50;UBERON:0000956!8.81e-08!21;UBERON:0001869!8.81e-08!21;UBERON:0000203!8.81e-08!21;UBERON:0000153!1.26e-07!94;UBERON:0007811!4.03e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.63e-15,34;UBERON:0000073,1.18e-14,54;UBERON:0001017,7.29e-14,73;UBERON:0001016,1.75e-13,75;UBERON:0001049,1.87e-13,52;UBERON:0005068,1.87e-13,52;UBERON:0006241,1.87e-13,52;UBERON:0007135,1.87e-13,52;UBERON:0002346,2.29e-13,64;UBERON:0003075,2.29e-13,64;UBERON:0007284,2.29e-13,64;UBERON:0003080,4.03e-12,40;UBERON:0003056,4.22e-12,49;UBERON:0002780,7.89e-12,39;UBERON:0001890,7.89e-12,39;UBERON:0006240,7.89e-12,39;UBERON:0003528,8.45e-12,29;UBERON:0002791,8.45e-12,29;UBERON:0001893,8.45e-12,29;UBERON:0004121,1.25e-11,95;UBERON:0000924,1.25e-11,95;UBERON:0006601,1.25e-11,95;UBERON:0010371,2.14e-11,73;UBERON:0002616,8.63e-11,46;UBERON:0000955,1.63e-10,47;UBERON:0006238,1.63e-10,47;UBERON:0010314,6.06e-09,92;UBERON:0000956,8.81e-08,21;UBERON:0001869,8.81e-08,21;UBERON:0000203,8.81e-08,21 | |||
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| ||
|short_description=p1@Spin1 | |short_description=p1@Spin1 | ||
}} | }} |
Latest revision as of 17:15, 1 October 2015
Short description: | p1@Spin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000057478, NM_146043, uc007qly.1_5end |
EntrezGene: | Spin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.23e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-14 | 23 |
neuron | 5.87e-12 | 33 |
neuronal stem cell | 5.87e-12 | 33 |
neuroblast | 5.87e-12 | 33 |
electrically signaling cell | 5.87e-12 | 33 |
electrically responsive cell | 1.91e-09 | 39 |
electrically active cell | 1.91e-09 | 39 |
embryonic cell | 2.41e-08 | 70 |
ectodermal cell | 3.42e-08 | 44 |
neurectodermal cell | 3.42e-08 | 44 |
neural cell | 8.49e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
gray matter | 7.63e-15 | 34 |
regional part of nervous system | 1.18e-14 | 54 |
central nervous system | 7.29e-14 | 73 |
nervous system | 1.75e-13 | 75 |
neural tube | 1.87e-13 | 52 |
neural rod | 1.87e-13 | 52 |
future spinal cord | 1.87e-13 | 52 |
neural keel | 1.87e-13 | 52 |
neurectoderm | 2.29e-13 | 64 |
neural plate | 2.29e-13 | 64 |
presumptive neural plate | 2.29e-13 | 64 |
anterior neural tube | 4.03e-12 | 40 |
pre-chordal neural plate | 4.22e-12 | 49 |
regional part of forebrain | 7.89e-12 | 39 |
forebrain | 7.89e-12 | 39 |
future forebrain | 7.89e-12 | 39 |
brain grey matter | 8.45e-12 | 29 |
regional part of telencephalon | 8.45e-12 | 29 |
telencephalon | 8.45e-12 | 29 |
ectoderm-derived structure | 1.25e-11 | 95 |
ectoderm | 1.25e-11 | 95 |
presumptive ectoderm | 1.25e-11 | 95 |
ecto-epithelium | 2.14e-11 | 73 |
regional part of brain | 8.63e-11 | 46 |
brain | 1.63e-10 | 47 |
future brain | 1.63e-10 | 47 |
structure with developmental contribution from neural crest | 6.06e-09 | 92 |
cerebral cortex | 8.81e-08 | 21 |
cerebral hemisphere | 8.81e-08 | 21 |
pallium | 8.81e-08 | 21 |