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FFCP PHASE1:Mm9::chr6:7505053..7505067,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=21333
|EntrezGene=21333
|HGNC=
|HGNC=
|MCL_coexpression_id=90
|TSSclassifier=NA
|UniProt=P41539,Q149W7,B7ZMQ2
|UniProt=P41539,Q149W7,B7ZMQ2
|association_with_transcript=-3bp_to_ENSMUST00000090679,ENSMUST00000115546,NM_009311,uc009axc.1,uc009axd.2_5end
|association_with_transcript=-3bp_to_ENSMUST00000090679,ENSMUST00000115546,NM_009311,uc009axc.1,uc009axd.2_5end
|cluster_id=chr6:7505053..7505067,+
|description=CAGE_peak_1_at_Tac1_5end
|description=CAGE_peak_1_at_Tac1_5end
|id=chr6:7505053..7505067,+
|id=chr6:7505053..7505067,+
|ontology_enrichment_celltype=CL:0000117!1.18e-11!23;CL:0000337!1.18e-11!23;CL:0000540!2.33e-08!33;CL:0000047!2.33e-08!33;CL:0000031!2.33e-08!33;CL:0000404!2.33e-08!33
|ontology_enrichment_celltype=CL:0000117!1.18e-11!23;CL:0000337!1.18e-11!23;CL:0000540!2.33e-08!33;CL:0000047!2.33e-08!33;CL:0000031!2.33e-08!33;CL:0000404!2.33e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,4.73e-12,23;CL:0000337,4.73e-12,23;CL:0000540,1.37e-07,33;CL:0000047,1.37e-07,33;CL:0000031,1.37e-07,33;CL:0000404,1.37e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.04e-15!52;UBERON:0005068!3.04e-15!52;UBERON:0006241!3.04e-15!52;UBERON:0007135!3.04e-15!52;UBERON:0000073!7.22e-15!75;UBERON:0001016!7.22e-15!75;UBERON:0000033!1.27e-14!63;UBERON:0001017!6.29e-14!73;UBERON:0005743!6.29e-14!73;UBERON:0002346!7.39e-14!71;UBERON:0003075!7.39e-14!71;UBERON:0007284!7.39e-14!71;UBERON:0000955!1.79e-13!50;UBERON:0006238!1.79e-13!50;UBERON:0003056!1.89e-13!49;UBERON:0002020!2.40e-13!34;UBERON:0002616!3.99e-13!49;UBERON:0004121!2.50e-12!102;UBERON:0000924!2.50e-12!102;UBERON:0006601!2.50e-12!102;UBERON:0003080!3.24e-12!40;UBERON:0002780!1.44e-11!39;UBERON:0001890!1.44e-11!39;UBERON:0006240!1.44e-11!39;UBERON:0002791!4.27e-10!29;UBERON:0003528!4.27e-10!29;UBERON:0001893!4.27e-10!29;UBERON:0000153!4.08e-08!94;UBERON:0007811!1.39e-07!86
|ontology_enrichment_uberon=UBERON:0001049!3.04e-15!52;UBERON:0005068!3.04e-15!52;UBERON:0006241!3.04e-15!52;UBERON:0007135!3.04e-15!52;UBERON:0000073!7.22e-15!75;UBERON:0001016!7.22e-15!75;UBERON:0000033!1.27e-14!63;UBERON:0001017!6.29e-14!73;UBERON:0005743!6.29e-14!73;UBERON:0002346!7.39e-14!71;UBERON:0003075!7.39e-14!71;UBERON:0007284!7.39e-14!71;UBERON:0000955!1.79e-13!50;UBERON:0006238!1.79e-13!50;UBERON:0003056!1.89e-13!49;UBERON:0002020!2.40e-13!34;UBERON:0002616!3.99e-13!49;UBERON:0004121!2.50e-12!102;UBERON:0000924!2.50e-12!102;UBERON:0006601!2.50e-12!102;UBERON:0003080!3.24e-12!40;UBERON:0002780!1.44e-11!39;UBERON:0001890!1.44e-11!39;UBERON:0006240!1.44e-11!39;UBERON:0002791!4.27e-10!29;UBERON:0003528!4.27e-10!29;UBERON:0001893!4.27e-10!29;UBERON:0000153!4.08e-08!94;UBERON:0007811!1.39e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.59e-17,64;UBERON:0003075,6.59e-17,64;UBERON:0007284,6.59e-17,64;UBERON:0000073,1.71e-16,54;UBERON:0001049,2.82e-15,52;UBERON:0005068,2.82e-15,52;UBERON:0006241,2.82e-15,52;UBERON:0007135,2.82e-15,52;UBERON:0001016,1.09e-14,75;UBERON:0002020,1.82e-14,34;UBERON:0010371,3.19e-14,73;UBERON:0004121,5.03e-14,95;UBERON:0000924,5.03e-14,95;UBERON:0006601,5.03e-14,95;UBERON:0003056,6.00e-14,49;UBERON:0001017,1.13e-13,73;UBERON:0003080,1.65e-12,40;UBERON:0002780,8.50e-12,39;UBERON:0001890,8.50e-12,39;UBERON:0006240,8.50e-12,39;UBERON:0000955,1.27e-11,47;UBERON:0006238,1.27e-11,47;UBERON:0002616,2.99e-11,46;UBERON:0003528,8.18e-11,29;UBERON:0002791,8.18e-11,29;UBERON:0001893,8.18e-11,29;UBERON:0000160,3.53e-07,31;UBERON:0005409,4.21e-07,47;UBERON:0002619,4.96e-07,17;UBERON:0010314,7.37e-07,92
|phase1_expression=2.5623815536767,2.79180326111489,1.81999695755814,0.90739263392049,0,44.8237656004746,84.5677758955803,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7770130044733,0,0,31.0385300219209,38.3113499382174,6.31655160526522,9.47676391549965,10.7735616342945,48.6459953808317,16.1299283046356,50.5545564294095,0,0,0,4.33277429626912,12.9663023379624,5.3084032628216,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,33.9891654244124,49.1961610722991,31.691570175309,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,0.210324961351382,83.6957384303144,105.796031115823,53.7734608553648,45.0473713785711,58.8300023430413,68.271846219621,30.3895864642747,36.7119614482422,22.5525552018631,24.0612502674337,14.0646610050325,58.0700637922872,139.565127287857,87.4005977283354,97.2274332063103,94.2500526890061,112.585265278482,24.1566556732857,29.5484800017531,0,0,14.2793980078628,0,0,0,5.33688796500657,0,0,0,0.422530259330042,0,0,0,0.865964164044856,0,0.505524445014783,4.33898742932428,0,0.148442139064825,0,0,0,0.753613202763113,1.76383060703557,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0,29.8226817948995,0.878342391034642,0.83778682725382,19.1592791406444,0,0,0,112.942142111236,489.983145618749,142.743344000214,82.2189034509468,60.6045633872883,104.10181032434,202.801578834697,0.101839363850316,0.124406970610093,1.0108910337347,4.20883711772948,1.95180664444056,8.5063778640385,6.30217454318722,8.59017461663576,9.0488543871266,15.2455327138971,16.6789069716317,12.1590584247337,1.94011193639558,5.10586416453112,8.44565395986955,5.47989331068937,14.1804097105055,4.179025998266,12.3469281844766,0,0,0,0,0,0.234526059981096,0.720248245844059,0,0.393528463494808,0,0,0.268273401399619,0,0,0.164167464079095,0.405344047729279,0,0.658650345873152,0.536825675041487,19.5569652164638,2.88132914661996,1.32167513193519,12.164726066523,0,0,3.09281907173024,11.6976444281539,16.6783532883653,32.1481308130225,17.0830462156024,23.5519505255336,20.3581519128218,20.0946036761562,17.7417319278399,11.6846523125049,15.9942156907274,27.2823544358483,0.379335801906163,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,50.8945370261301,45.4781343977748,0,0,5.67914794949262,2.73307121007647,1.07711698866399,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.790575555893047,16.0660658210904,1.13552068166615,0,0,0.659880491890142,0,1.21390318077491,1.51161778482376,0.377210159511796,0.590603785761546,0.922305443831782,7.75284879504663,2.90826983582004,0.712994756769443,5.37262488490887,1.05418608574999,0,2.7235168460303,1.8006109403131,0.129358683782755,0.857348140126369,2.48276327099183,7.49149033928696,25.834196234533,26.4884505729701,0,0,0.882113592219848,0,0.807322133479528,2.83470747162333,2.626191568069,1.14898629821543,11.9507143018239,49.1377050327851,0,0.82554747185289,0.925972636848558,0,0,0,1.35982743995084,1.95932033253121,0.414599921413271,21.0027535963325,0.474503990371703,10.5726122905961,18.6849239621716,20.9088296014469,22.9280691933486,19.555330225799,23.9695021603474,14.3965768091216,13.9984171155136,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0.179026695667481,0.993406773906324,0.120195449519969,0.590758108698309,0.605798699688886,0.15241361331,0.604957110821043,0.779663045918019,1.34696578296461,0.467507608726276,2.0405734525369,0,0,0,0.965947970160952,0.375364950902364,0,0.643105137237198,0,42.9211400388971,45.5721984142105,34.3737308063638,37.6358469332676,22.6077231524312,20.3956352295219,14.8504950050997,19.8141329418657,23.5634052671786,24.3347346523355,0.62272408550506,4.78829848081237,8.87814749921498,7.05009479498053,6.49800804146745,6.80220981265052,14.0015438515018,16.4828045791115,16.0459604795908,12.6348605881899,20.0248646913289,15.6559863350443,11.8924714486751,11.2044016708521,12.2911903565012,13.8125170472091,11.0090109647613,12.5390993301408,8.65380391686944,14.8670909335741,12.0004238334895,12.7782580434723,9.53744759789284,14.0986024133359,12.798875736485,10.9152844180263,15.1830217484401,21.3086466264653,11.4075455630524,17.3954104213899,12.3380418849141,11.1310065084387,13.5046244245997,13.789378865551,11.1885834369062,12.4905288968973,13.8019648982791,12.8922632428979,12.242453252406,12.5737108898124,7.88350641109433
|phase1_expression=2.5623815536767,2.79180326111489,1.81999695755814,0.90739263392049,0,44.8237656004746,84.5677758955803,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7770130044733,0,0,31.0385300219209,38.3113499382174,6.31655160526522,9.47676391549965,10.7735616342945,48.6459953808317,16.1299283046356,50.5545564294095,0,0,0,4.33277429626912,12.9663023379624,5.3084032628216,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,33.9891654244124,49.1961610722991,31.691570175309,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,0.210324961351382,83.6957384303144,105.796031115823,53.7734608553648,45.0473713785711,58.8300023430413,68.271846219621,30.3895864642747,36.7119614482422,22.5525552018631,24.0612502674337,14.0646610050325,58.0700637922872,139.565127287857,87.4005977283354,97.2274332063103,94.2500526890061,112.585265278482,24.1566556732857,29.5484800017531,0,0,14.2793980078628,0,0,0,5.33688796500657,0,0,0,0.422530259330042,0,0,0,0.865964164044856,0,0.505524445014783,4.33898742932428,0,0.148442139064825,0,0,0,0.753613202763113,1.76383060703557,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0,29.8226817948995,0.878342391034642,0.83778682725382,19.1592791406444,0,0,0,112.942142111236,489.983145618749,142.743344000214,82.2189034509468,60.6045633872883,104.10181032434,202.801578834697,0.101839363850316,0.124406970610093,1.0108910337347,4.20883711772948,1.95180664444056,8.5063778640385,6.30217454318722,8.59017461663576,9.0488543871266,15.2455327138971,16.6789069716317,12.1590584247337,1.94011193639558,5.10586416453112,8.44565395986955,5.47989331068937,14.1804097105055,4.179025998266,12.3469281844766,0,0,0,0,0,0.234526059981096,0.720248245844059,0,0.393528463494808,0,0,0.268273401399619,0,0,0.164167464079095,0.405344047729279,0,0.658650345873152,0.536825675041487,19.5569652164638,2.88132914661996,1.32167513193519,12.164726066523,0,0,3.09281907173024,11.6976444281539,16.6783532883653,32.1481308130225,17.0830462156024,23.5519505255336,20.3581519128218,20.0946036761562,17.7417319278399,11.6846523125049,15.9942156907274,27.2823544358483,0.379335801906163,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,50.8945370261301,45.4781343977748,0,0,5.67914794949262,2.73307121007647,1.07711698866399,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.790575555893047,16.0660658210904,1.13552068166615,0,0,0.659880491890142,0,1.21390318077491,1.51161778482376,0.377210159511796,0.590603785761546,0.922305443831782,7.75284879504663,2.90826983582004,0.712994756769443,5.37262488490887,1.05418608574999,0,2.7235168460303,1.8006109403131,0.129358683782755,0.857348140126369,2.48276327099183,7.49149033928696,25.834196234533,26.4884505729701,0,0,0.882113592219848,0,0.807322133479528,2.83470747162333,2.626191568069,1.14898629821543,11.9507143018239,49.1377050327851,0,0.82554747185289,0.925972636848558,0,0,0,1.35982743995084,1.95932033253121,0.414599921413271,21.0027535963325,0.474503990371703,10.5726122905961,18.6849239621716,20.9088296014469,22.9280691933486,19.555330225799,23.9695021603474,14.3965768091216,13.9984171155136,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0.179026695667481,0.993406773906324,0.120195449519969,0.590758108698309,0.605798699688886,0.15241361331,0.604957110821043,0.779663045918019,1.34696578296461,0.467507608726276,2.0405734525369,0,0,0,0.965947970160952,0.375364950902364,0,0.643105137237198,0,42.9211400388971,45.5721984142105,34.3737308063638,37.6358469332676,22.6077231524312,20.3956352295219,14.8504950050997,19.8141329418657,23.5634052671786,24.3347346523355,0.62272408550506,4.78829848081237,8.87814749921498,7.05009479498053,6.49800804146745,6.80220981265052,14.0015438515018,16.4828045791115,16.0459604795908,12.6348605881899,20.0248646913289,15.6559863350443,11.8924714486751,11.2044016708521,12.2911903565012,13.8125170472091,11.0090109647613,12.5390993301408,8.65380391686944,14.8670909335741,12.0004238334895,12.7782580434723,9.53744759789284,14.0986024133359,12.798875736485,10.9152844180263,15.1830217484401,21.3086466264653,11.4075455630524,17.3954104213899,12.3380418849141,11.1310065084387,13.5046244245997,13.789378865551,11.1885834369062,12.4905288968973,13.8019648982791,12.8922632428979,12.242453252406,12.5737108898124,7.88350641109433
|short_description=p1@Tac1
|short_description=p1@Tac1
}}
}}

Latest revision as of 17:55, 1 October 2015

Short description:p1@Tac1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tac1_5end
Coexpression cluster:MCL_coexpression_mm9:90
Association with transcript: -3bp_to_ENSMUST00000090679, ENSMUST00000115546, NM_009311, uc009axc.1, uc009axd.2_5end
EntrezGene:Tac1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tac1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I744.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I884.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D131.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D238.31
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I210.77
Ileum epithelium, pool1.CNhs13199.10252-104B948.65
Ileum epithelium, pool2.CNhs13232.10253-104C116.13
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C850.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C333.99
Mouse Granule cells, donor2.CNhs12357.11731-123E349.20
Mouse Granule cells, donor3.CNhs12108.11636-122C731.69
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F183.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5105.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D253.77
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F245.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D658.83
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D368.27
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F330.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.71
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F424.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E458.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5139.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I687.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D697.23
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F694.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1112.59
Mouse Schwann, donor1.CNhs12507.11728-123D924.16
Mouse Schwann, donor2.CNhs12573.11746-123F929.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H719.16
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4112.94
corpus striatum, adult.CNhs10487.19-21D8489.98
corpus striatum, neonate N00.CNhs11226.630-43F1142.74
cortex, adult.CNhs10473.12-14D582.22
cortex, neonate N30.CNhs11107.1392-42F260.60
diencephalon, adult.CNhs10482.20-12F2104.10
diencephalon, neonate N30.CNhs11201.1388-42B2202.80
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E28.51
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C69.05
eyeball, neonate N01.CNhs11140.1532-43E715.25
eyeball, neonate N02.CNhs11205.1551-44G816.68
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E28.45
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E714.18
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B512.35
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E819.56
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A312.16
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D316.68
intestine, embryo E18.CNhs10526.1289-20F732.15
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E923.55
intestine, neonate N06.CNhs11102.688-20B820.36
intestine, neonate N07.CNhs11095.720-20F220.09
intestine, neonate N10.CNhs11098.755-23A517.74
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E315.99
intestine, neonate N30.CNhs11131.1384-42G127.28
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C250.89
medulla oblongata, neonate N30.CNhs11200.1396-42A345.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F525.83
pituitary gland, neonate N00.CNhs11190.1308-22E926.49
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H32.83
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C949.14
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D418.68
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C622.93
stomach, neonate N03.CNhs11193.1340-24B819.56
stomach, neonate N07.CNhs11210.718-18A923.97
stomach, neonate N25.CNhs11104.1355-25E414.40
stomach, neonate N30.CNhs11134.1386-42I114.00
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.92
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A245.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.37
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B16.50
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.02
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.79
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C212.89
whole body, neonate N01.CNhs10576.659-23C612.24
whole body, neonate N06.CNhs10515.692-21D112.57
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.73e-1223
neuroblast (sensu Vertebrata)4.73e-1223
neuron1.37e-0733
neuronal stem cell1.37e-0733
neuroblast1.37e-0733
electrically signaling cell1.37e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm6.59e-1764
neural plate6.59e-1764
presumptive neural plate6.59e-1764
regional part of nervous system1.71e-1654
neural tube2.82e-1552
neural rod2.82e-1552
future spinal cord2.82e-1552
neural keel2.82e-1552
nervous system1.09e-1475
gray matter1.82e-1434
ecto-epithelium3.19e-1473
ectoderm-derived structure5.03e-1495
ectoderm5.03e-1495
presumptive ectoderm5.03e-1495
pre-chordal neural plate6.00e-1449
central nervous system1.13e-1373
anterior neural tube1.65e-1240
regional part of forebrain8.50e-1239
forebrain8.50e-1239
future forebrain8.50e-1239
brain1.27e-1147
future brain1.27e-1147
regional part of brain2.99e-1146
brain grey matter8.18e-1129
regional part of telencephalon8.18e-1129
telencephalon8.18e-1129
intestine3.53e-0731
gastrointestinal system4.21e-0747
regional part of cerebral cortex4.96e-0717
structure with developmental contribution from neural crest7.37e-0792
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