FFCP PHASE1:Mm9::chr6:7505053..7505067,+: Difference between revisions
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{{FFCP|EntrezGene=21333|HGNC=|MCL_coexpression_id=90|UniProt=P41539,Q149W7,B7ZMQ2|association_with_transcript=-3bp_to_ENSMUST00000090679,ENSMUST00000115546,NM_009311,uc009axc.1,uc009axd.2_5end|description=CAGE_peak_1_at_Tac1_5end|id=chr6:7505053..7505067,+|ontology_enrichment_celltype=CL:0000117!1.18e-11!23;CL:0000337!1.18e-11!23;CL:0000540!2.33e-08!33;CL:0000047!2.33e-08!33;CL:0000031!2.33e-08!33;CL:0000404!2.33e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.73e-12,23;CL:0000337,4.73e-12,23;CL:0000540,1.37e-07,33;CL:0000047,1.37e-07,33;CL:0000031,1.37e-07,33;CL:0000404,1.37e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.04e-15!52;UBERON:0005068!3.04e-15!52;UBERON:0006241!3.04e-15!52;UBERON:0007135!3.04e-15!52;UBERON:0000073!7.22e-15!75;UBERON:0001016!7.22e-15!75;UBERON:0000033!1.27e-14!63;UBERON:0001017!6.29e-14!73;UBERON:0005743!6.29e-14!73;UBERON:0002346!7.39e-14!71;UBERON:0003075!7.39e-14!71;UBERON:0007284!7.39e-14!71;UBERON:0000955!1.79e-13!50;UBERON:0006238!1.79e-13!50;UBERON:0003056!1.89e-13!49;UBERON:0002020!2.40e-13!34;UBERON:0002616!3.99e-13!49;UBERON:0004121!2.50e-12!102;UBERON:0000924!2.50e-12!102;UBERON:0006601!2.50e-12!102;UBERON:0003080!3.24e-12!40;UBERON:0002780!1.44e-11!39;UBERON:0001890!1.44e-11!39;UBERON:0006240!1.44e-11!39;UBERON:0002791!4.27e-10!29;UBERON:0003528!4.27e-10!29;UBERON:0001893!4.27e-10!29;UBERON:0000153!4.08e-08!94;UBERON:0007811!1.39e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.59e-17,64;UBERON:0003075,6.59e-17,64;UBERON:0007284,6.59e-17,64;UBERON:0000073,1.71e-16,54;UBERON:0001049,2.82e-15,52;UBERON:0005068,2.82e-15,52;UBERON:0006241,2.82e-15,52;UBERON:0007135,2.82e-15,52;UBERON:0001016,1.09e-14,75;UBERON:0002020,1.82e-14,34;UBERON:0010371,3.19e-14,73;UBERON:0004121,5.03e-14,95;UBERON:0000924,5.03e-14,95;UBERON:0006601,5.03e-14,95;UBERON:0003056,6.00e-14,49;UBERON:0001017,1.13e-13,73;UBERON:0003080,1.65e-12,40;UBERON:0002780,8.50e-12,39;UBERON:0001890,8.50e-12,39;UBERON:0006240,8.50e-12,39;UBERON:0000955,1.27e-11,47;UBERON:0006238,1.27e-11,47;UBERON:0002616,2.99e-11,46;UBERON:0003528,8.18e-11,29;UBERON:0002791,8.18e-11,29;UBERON:0001893,8.18e-11,29;UBERON:0000160,3.53e-07,31;UBERON:0005409,4.21e-07,47;UBERON:0002619,4.96e-07,17;UBERON:0010314,7.37e-07,92|phase1_expression=2.5623815536767,2.79180326111489,1.81999695755814,0.90739263392049,0,44.8237656004746,84.5677758955803,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7770130044733,0,0,31.0385300219209,38.3113499382174,6.31655160526522,9.47676391549965,10.7735616342945,48.6459953808317,16.1299283046356,50.5545564294095,0,0,0,4.33277429626912,12.9663023379624,5.3084032628216,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,33.9891654244124,49.1961610722991,31.691570175309,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,0.210324961351382,83.6957384303144,105.796031115823,53.7734608553648,45.0473713785711,58.8300023430413,68.271846219621,30.3895864642747,36.7119614482422,22.5525552018631,24.0612502674337,14.0646610050325,58.0700637922872,139.565127287857,87.4005977283354,97.2274332063103,94.2500526890061,112.585265278482,24.1566556732857,29.5484800017531,0,0,14.2793980078628,0,0,0,5.33688796500657,0,0,0,0.422530259330042,0,0,0,0.865964164044856,0,0.505524445014783,4.33898742932428,0,0.148442139064825,0,0,0,0.753613202763113,1.76383060703557,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0,29.8226817948995,0.878342391034642,0.83778682725382,19.1592791406444,0,0,0,112.942142111236,489.983145618749,142.743344000214,82.2189034509468,60.6045633872883,104.10181032434,202.801578834697,0.101839363850316,0.124406970610093,1.0108910337347,4.20883711772948,1.95180664444056,8.5063778640385,6.30217454318722,8.59017461663576,9.0488543871266,15.2455327138971,16.6789069716317,12.1590584247337,1.94011193639558,5.10586416453112,8.44565395986955,5.47989331068937,14.1804097105055,4.179025998266,12.3469281844766,0,0,0,0,0,0.234526059981096,0.720248245844059,0,0.393528463494808,0,0,0.268273401399619,0,0,0.164167464079095,0.405344047729279,0,0.658650345873152,0.536825675041487,19.5569652164638,2.88132914661996,1.32167513193519,12.164726066523,0,0,3.09281907173024,11.6976444281539,16.6783532883653,32.1481308130225,17.0830462156024,23.5519505255336,20.3581519128218,20.0946036761562,17.7417319278399,11.6846523125049,15.9942156907274,27.2823544358483,0.379335801906163,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,50.8945370261301,45.4781343977748,0,0,5.67914794949262,2.73307121007647,1.07711698866399,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.790575555893047,16.0660658210904,1.13552068166615,0,0,0.659880491890142,0,1.21390318077491,1.51161778482376,0.377210159511796,0.590603785761546,0.922305443831782,7.75284879504663,2.90826983582004,0.712994756769443,5.37262488490887,1.05418608574999,0,2.7235168460303,1.8006109403131,0.129358683782755,0.857348140126369,2.48276327099183,7.49149033928696,25.834196234533,26.4884505729701,0,0,0.882113592219848,0,0.807322133479528,2.83470747162333,2.626191568069,1.14898629821543,11.9507143018239,49.1377050327851,0,0.82554747185289,0.925972636848558,0,0,0,1.35982743995084,1.95932033253121,0.414599921413271,21.0027535963325,0.474503990371703,10.5726122905961,18.6849239621716,20.9088296014469,22.9280691933486,19.555330225799,23.9695021603474,14.3965768091216,13.9984171155136,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0.179026695667481,0.993406773906324,0.120195449519969,0.590758108698309,0.605798699688886,0.15241361331,0.604957110821043,0.779663045918019,1.34696578296461,0.467507608726276,2.0405734525369,0,0,0,0.965947970160952,0.375364950902364,0,0.643105137237198,0,42.9211400388971,45.5721984142105,34.3737308063638,37.6358469332676,22.6077231524312,20.3956352295219,14.8504950050997,19.8141329418657,23.5634052671786,24.3347346523355,0.62272408550506,4.78829848081237,8.87814749921498,7.05009479498053,6.49800804146745,6.80220981265052,14.0015438515018,16.4828045791115,16.0459604795908,12.6348605881899,20.0248646913289,15.6559863350443,11.8924714486751,11.2044016708521,12.2911903565012,13.8125170472091,11.0090109647613,12.5390993301408,8.65380391686944,14.8670909335741,12.0004238334895,12.7782580434723,9.53744759789284,14.0986024133359,12.798875736485,10.9152844180263,15.1830217484401,21.3086466264653,11.4075455630524,17.3954104213899,12.3380418849141,11.1310065084387,13.5046244245997,13.789378865551,11.1885834369062,12.4905288968973,13.8019648982791,12.8922632428979,12.242453252406,12.5737108898124,7.88350641109433|short_description=p1@Tac1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21333 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=P41539,Q149W7,B7ZMQ2 | |||
|association_with_transcript=-3bp_to_ENSMUST00000090679,ENSMUST00000115546,NM_009311,uc009axc.1,uc009axd.2_5end | |||
|cluster_id=chr6:7505053..7505067,+ | |||
|description=CAGE_peak_1_at_Tac1_5end | |||
|id=chr6:7505053..7505067,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.18e-11!23;CL:0000337!1.18e-11!23;CL:0000540!2.33e-08!33;CL:0000047!2.33e-08!33;CL:0000031!2.33e-08!33;CL:0000404!2.33e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.73e-12,23;CL:0000337,4.73e-12,23;CL:0000540,1.37e-07,33;CL:0000047,1.37e-07,33;CL:0000031,1.37e-07,33;CL:0000404,1.37e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.04e-15!52;UBERON:0005068!3.04e-15!52;UBERON:0006241!3.04e-15!52;UBERON:0007135!3.04e-15!52;UBERON:0000073!7.22e-15!75;UBERON:0001016!7.22e-15!75;UBERON:0000033!1.27e-14!63;UBERON:0001017!6.29e-14!73;UBERON:0005743!6.29e-14!73;UBERON:0002346!7.39e-14!71;UBERON:0003075!7.39e-14!71;UBERON:0007284!7.39e-14!71;UBERON:0000955!1.79e-13!50;UBERON:0006238!1.79e-13!50;UBERON:0003056!1.89e-13!49;UBERON:0002020!2.40e-13!34;UBERON:0002616!3.99e-13!49;UBERON:0004121!2.50e-12!102;UBERON:0000924!2.50e-12!102;UBERON:0006601!2.50e-12!102;UBERON:0003080!3.24e-12!40;UBERON:0002780!1.44e-11!39;UBERON:0001890!1.44e-11!39;UBERON:0006240!1.44e-11!39;UBERON:0002791!4.27e-10!29;UBERON:0003528!4.27e-10!29;UBERON:0001893!4.27e-10!29;UBERON:0000153!4.08e-08!94;UBERON:0007811!1.39e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.59e-17,64;UBERON:0003075,6.59e-17,64;UBERON:0007284,6.59e-17,64;UBERON:0000073,1.71e-16,54;UBERON:0001049,2.82e-15,52;UBERON:0005068,2.82e-15,52;UBERON:0006241,2.82e-15,52;UBERON:0007135,2.82e-15,52;UBERON:0001016,1.09e-14,75;UBERON:0002020,1.82e-14,34;UBERON:0010371,3.19e-14,73;UBERON:0004121,5.03e-14,95;UBERON:0000924,5.03e-14,95;UBERON:0006601,5.03e-14,95;UBERON:0003056,6.00e-14,49;UBERON:0001017,1.13e-13,73;UBERON:0003080,1.65e-12,40;UBERON:0002780,8.50e-12,39;UBERON:0001890,8.50e-12,39;UBERON:0006240,8.50e-12,39;UBERON:0000955,1.27e-11,47;UBERON:0006238,1.27e-11,47;UBERON:0002616,2.99e-11,46;UBERON:0003528,8.18e-11,29;UBERON:0002791,8.18e-11,29;UBERON:0001893,8.18e-11,29;UBERON:0000160,3.53e-07,31;UBERON:0005409,4.21e-07,47;UBERON:0002619,4.96e-07,17;UBERON:0010314,7.37e-07,92 | |||
|phase1_expression=2.5623815536767,2.79180326111489,1.81999695755814,0.90739263392049,0,44.8237656004746,84.5677758955803,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7770130044733,0,0,31.0385300219209,38.3113499382174,6.31655160526522,9.47676391549965,10.7735616342945,48.6459953808317,16.1299283046356,50.5545564294095,0,0,0,4.33277429626912,12.9663023379624,5.3084032628216,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,33.9891654244124,49.1961610722991,31.691570175309,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,0.210324961351382,83.6957384303144,105.796031115823,53.7734608553648,45.0473713785711,58.8300023430413,68.271846219621,30.3895864642747,36.7119614482422,22.5525552018631,24.0612502674337,14.0646610050325,58.0700637922872,139.565127287857,87.4005977283354,97.2274332063103,94.2500526890061,112.585265278482,24.1566556732857,29.5484800017531,0,0,14.2793980078628,0,0,0,5.33688796500657,0,0,0,0.422530259330042,0,0,0,0.865964164044856,0,0.505524445014783,4.33898742932428,0,0.148442139064825,0,0,0,0.753613202763113,1.76383060703557,0.251333182659351,0,0,0,0.161766849947409,0.220841518460394,0,29.8226817948995,0.878342391034642,0.83778682725382,19.1592791406444,0,0,0,112.942142111236,489.983145618749,142.743344000214,82.2189034509468,60.6045633872883,104.10181032434,202.801578834697,0.101839363850316,0.124406970610093,1.0108910337347,4.20883711772948,1.95180664444056,8.5063778640385,6.30217454318722,8.59017461663576,9.0488543871266,15.2455327138971,16.6789069716317,12.1590584247337,1.94011193639558,5.10586416453112,8.44565395986955,5.47989331068937,14.1804097105055,4.179025998266,12.3469281844766,0,0,0,0,0,0.234526059981096,0.720248245844059,0,0.393528463494808,0,0,0.268273401399619,0,0,0.164167464079095,0.405344047729279,0,0.658650345873152,0.536825675041487,19.5569652164638,2.88132914661996,1.32167513193519,12.164726066523,0,0,3.09281907173024,11.6976444281539,16.6783532883653,32.1481308130225,17.0830462156024,23.5519505255336,20.3581519128218,20.0946036761562,17.7417319278399,11.6846523125049,15.9942156907274,27.2823544358483,0.379335801906163,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0.157635144106191,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,50.8945370261301,45.4781343977748,0,0,5.67914794949262,2.73307121007647,1.07711698866399,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.790575555893047,16.0660658210904,1.13552068166615,0,0,0.659880491890142,0,1.21390318077491,1.51161778482376,0.377210159511796,0.590603785761546,0.922305443831782,7.75284879504663,2.90826983582004,0.712994756769443,5.37262488490887,1.05418608574999,0,2.7235168460303,1.8006109403131,0.129358683782755,0.857348140126369,2.48276327099183,7.49149033928696,25.834196234533,26.4884505729701,0,0,0.882113592219848,0,0.807322133479528,2.83470747162333,2.626191568069,1.14898629821543,11.9507143018239,49.1377050327851,0,0.82554747185289,0.925972636848558,0,0,0,1.35982743995084,1.95932033253121,0.414599921413271,21.0027535963325,0.474503990371703,10.5726122905961,18.6849239621716,20.9088296014469,22.9280691933486,19.555330225799,23.9695021603474,14.3965768091216,13.9984171155136,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0.179026695667481,0.993406773906324,0.120195449519969,0.590758108698309,0.605798699688886,0.15241361331,0.604957110821043,0.779663045918019,1.34696578296461,0.467507608726276,2.0405734525369,0,0,0,0.965947970160952,0.375364950902364,0,0.643105137237198,0,42.9211400388971,45.5721984142105,34.3737308063638,37.6358469332676,22.6077231524312,20.3956352295219,14.8504950050997,19.8141329418657,23.5634052671786,24.3347346523355,0.62272408550506,4.78829848081237,8.87814749921498,7.05009479498053,6.49800804146745,6.80220981265052,14.0015438515018,16.4828045791115,16.0459604795908,12.6348605881899,20.0248646913289,15.6559863350443,11.8924714486751,11.2044016708521,12.2911903565012,13.8125170472091,11.0090109647613,12.5390993301408,8.65380391686944,14.8670909335741,12.0004238334895,12.7782580434723,9.53744759789284,14.0986024133359,12.798875736485,10.9152844180263,15.1830217484401,21.3086466264653,11.4075455630524,17.3954104213899,12.3380418849141,11.1310065084387,13.5046244245997,13.789378865551,11.1885834369062,12.4905288968973,13.8019648982791,12.8922632428979,12.242453252406,12.5737108898124,7.88350641109433 | |||
|short_description=p1@Tac1 | |||
}} |
Latest revision as of 17:55, 1 October 2015
Short description: | p1@Tac1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tac1_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -3bp_to_ENSMUST00000090679, ENSMUST00000115546, NM_009311, uc009axc.1, uc009axd.2_5end |
EntrezGene: | Tac1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.73e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.73e-12 | 23 |
neuron | 1.37e-07 | 33 |
neuronal stem cell | 1.37e-07 | 33 |
neuroblast | 1.37e-07 | 33 |
electrically signaling cell | 1.37e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.59e-17 | 64 |
neural plate | 6.59e-17 | 64 |
presumptive neural plate | 6.59e-17 | 64 |
regional part of nervous system | 1.71e-16 | 54 |
neural tube | 2.82e-15 | 52 |
neural rod | 2.82e-15 | 52 |
future spinal cord | 2.82e-15 | 52 |
neural keel | 2.82e-15 | 52 |
nervous system | 1.09e-14 | 75 |
gray matter | 1.82e-14 | 34 |
ecto-epithelium | 3.19e-14 | 73 |
ectoderm-derived structure | 5.03e-14 | 95 |
ectoderm | 5.03e-14 | 95 |
presumptive ectoderm | 5.03e-14 | 95 |
pre-chordal neural plate | 6.00e-14 | 49 |
central nervous system | 1.13e-13 | 73 |
anterior neural tube | 1.65e-12 | 40 |
regional part of forebrain | 8.50e-12 | 39 |
forebrain | 8.50e-12 | 39 |
future forebrain | 8.50e-12 | 39 |
brain | 1.27e-11 | 47 |
future brain | 1.27e-11 | 47 |
regional part of brain | 2.99e-11 | 46 |
brain grey matter | 8.18e-11 | 29 |
regional part of telencephalon | 8.18e-11 | 29 |
telencephalon | 8.18e-11 | 29 |
intestine | 3.53e-07 | 31 |
gastrointestinal system | 4.21e-07 | 47 |
regional part of cerebral cortex | 4.96e-07 | 17 |
structure with developmental contribution from neural crest | 7.37e-07 | 92 |