FFCP PHASE1:Mm9::chr16:22265993..22266022,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20462 | |EntrezGene=20462 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2072 | |MCL_coexpression_id=2072 | ||
|TSSclassifier=NA | |||
|UniProt=P62996 | |UniProt=P62996 | ||
|association_with_transcript=0bp_to_NM_009186,uc007ysc.1,uc007ysd.1_5end | |association_with_transcript=0bp_to_NM_009186,uc007ysc.1,uc007ysd.1_5end | ||
|cluster_id=chr16:22265993..22266022,- | |||
|description=CAGE_peak_1_at_Tra2b_5end | |description=CAGE_peak_1_at_Tra2b_5end | ||
|id=chr16:22265993..22266022,- | |id=chr16:22265993..22266022,- | ||
|ontology_enrichment_celltype=CL:0000542!1.08e-08!13;CL:0000051!1.08e-08!13;CL:0000988!2.18e-08!32;CL:0002032!2.18e-08!32;CL:0000037!2.18e-08!32;CL:0000566!2.18e-08!32;CL:0000837!2.18e-08!32;CL:0000838!2.84e-08!12;CL:0000084!1.28e-07!11;CL:0000827!1.28e-07!11;CL:0000791!9.60e-07!9;CL:0000789!9.60e-07!9;CL:0002420!9.60e-07!9;CL:0002419!9.60e-07!9;CL:0000790!9.60e-07!9 | |ontology_enrichment_celltype=CL:0000542!1.08e-08!13;CL:0000051!1.08e-08!13;CL:0000988!2.18e-08!32;CL:0002032!2.18e-08!32;CL:0000037!2.18e-08!32;CL:0000566!2.18e-08!32;CL:0000837!2.18e-08!32;CL:0000838!2.84e-08!12;CL:0000084!1.28e-07!11;CL:0000827!1.28e-07!11;CL:0000791!9.60e-07!9;CL:0000789!9.60e-07!9;CL:0002420!9.60e-07!9;CL:0002419!9.60e-07!9;CL:0000790!9.60e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.08e-08,13;CL:0000051,1.08e-08,13;CL:0000988,2.18e-08,32;CL:0002032,2.18e-08,32;CL:0000037,2.18e-08,32;CL:0000837,2.18e-08,32;CL:0000838,2.84e-08,12;CL:0000084,1.28e-07,11;CL:0000827,1.28e-07,11;CL:0000791,9.60e-07,9;CL:0000789,9.60e-07,9;CL:0002420,9.60e-07,9;CL:0002419,9.60e-07,9;CL:0000790,9.60e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.11e-10!29;UBERON:0002370!2.33e-09!23;UBERON:0000974!2.33e-09!23;UBERON:0004807!2.33e-09!23;UBERON:0005058!2.33e-09!23;UBERON:0003351!2.33e-09!23;UBERON:0009113!2.33e-09!23;UBERON:0003295!2.33e-09!23;UBERON:0009722!2.33e-09!23;UBERON:0005562!2.33e-09!23;UBERON:0007690!2.33e-09!23;UBERON:0003408!9.88e-09!24;UBERON:0002390!1.92e-08!45;UBERON:0003061!1.92e-08!45;UBERON:0000072!1.98e-08!27;UBERON:0006562!2.50e-08!24;UBERON:0001557!2.50e-08!24;UBERON:0001042!2.50e-08!24;UBERON:0008814!2.50e-08!24;UBERON:0009145!2.50e-08!24;UBERON:0002193!5.29e-08!48;UBERON:0000065!6.89e-08!41;UBERON:0001004!1.59e-07!42 | |ontology_enrichment_uberon=UBERON:0004177!1.11e-10!29;UBERON:0002370!2.33e-09!23;UBERON:0000974!2.33e-09!23;UBERON:0004807!2.33e-09!23;UBERON:0005058!2.33e-09!23;UBERON:0003351!2.33e-09!23;UBERON:0009113!2.33e-09!23;UBERON:0003295!2.33e-09!23;UBERON:0009722!2.33e-09!23;UBERON:0005562!2.33e-09!23;UBERON:0007690!2.33e-09!23;UBERON:0003408!9.88e-09!24;UBERON:0002390!1.92e-08!45;UBERON:0003061!1.92e-08!45;UBERON:0000072!1.98e-08!27;UBERON:0006562!2.50e-08!24;UBERON:0001557!2.50e-08!24;UBERON:0001042!2.50e-08!24;UBERON:0008814!2.50e-08!24;UBERON:0009145!2.50e-08!24;UBERON:0002193!5.29e-08!48;UBERON:0000065!6.89e-08!41;UBERON:0001004!1.59e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.11e-10,29;UBERON:0005057,1.11e-10,29;UBERON:0000153,4.24e-10,43;UBERON:0002370,2.33e-09,23;UBERON:0000974,2.33e-09,23;UBERON:0004807,2.33e-09,23;UBERON:0005058,2.33e-09,23;UBERON:0003351,2.33e-09,23;UBERON:0009113,2.33e-09,23;UBERON:0003295,2.33e-09,23;UBERON:0009722,2.33e-09,23;UBERON:0005562,2.33e-09,23;UBERON:0007690,2.33e-09,23;UBERON:0007811,6.19e-09,36;UBERON:0003408,9.88e-09,24;UBERON:0002390,1.92e-08,45;UBERON:0003061,1.92e-08,45;UBERON:0000072,1.98e-08,27;UBERON:0000077,2.45e-08,35;UBERON:0006562,2.50e-08,24;UBERON:0001557,2.50e-08,24;UBERON:0001042,2.50e-08,24;UBERON:0008814,2.50e-08,24;UBERON:0009145,2.50e-08,24;UBERON:0002193,5.29e-08,48;UBERON:0002405,5.29e-08,48;UBERON:0000065,6.89e-08,41;UBERON:0001004,1.59e-07,42 | |||
|phase1_expression=32.3500671151684,24.7772539423946,24.5699589270349,35.3883127228991,40.0716583957078,40.6267838026773,40.6485994636215,53.5861792282542,88.8376836777017,106.733424002829,50.851736562975,46.6667130122718,55.1266350378482,54.9000127191304,49.6333545105337,66.4118877038629,81.149177862865,43.6915099021159,42.0941311169618,44.5609134387932,37.4190476664707,43.6880185283895,57.7251533997047,28.9586285256066,24.31738379312,21.2465826722557,29.7225777349762,31.8897424375116,24.893067948785,20.4144405105544,32.1509240450192,23.4961349180064,28.9080450164748,15.8481681015439,33.5067878911479,43.885946374642,43.8964115964094,38.0863783970586,44.5361146378566,48.6877081895632,32.3527318417058,33.4692287629638,32.5291936530873,18.758625878361,19.8698785190249,18.7217687204915,4.69434806608824,7.63088047331563,4.61340983742391,6.61061656852564,9.09911740564856,4.31257693094915,73.6565640593463,77.6137491952139,69.9075102216325,16.7218633423366,19.1977404758967,21.6582278756526,23.0640765379941,16.398720357433,28.5224131577781,8.13226876965917,8.89294796111139,3.5995988691256,2.96659908770092,5.6838409195688,3.89480143673926,5.37905627450176,37.5356396556689,29.8363123713036,42.9062921156819,18.5673139862472,15.9025349485162,43.8517061189535,29.999632428708,27.5765635983006,22.0231761998777,17.2377906415003,21.0440950561054,29.0149833006426,27.1718301499157,32.2966289745191,16.7509799400829,20.8222165711722,20.1693687065389,25.6326869362091,26.4811326286331,34.6702969235059,33.319525066601,32.8736286464517,69.277612799701,27.5335640634044,21.759082678648,14.5719861742211,11.0461990966104,8.51251085484938,15.308441794361,23.68981483835,34.8113246167844,30.3872034078893,30.1404918322096,35.931413676009,53.5091003383956,28.4426681261332,30.5252367825812,37.2439002248395,30.8369911459018,21.8091210263405,29.5189187357776,23.4538579722423,34.1766093729288,24.3572382649713,25.8289356926786,24.8692356911827,29.1619993696548,23.8766523526383,22.0003521283593,19.8101118980279,30.9613693182456,33.1622042392189,32.0220201767571,34.911018225736,20.5030937339934,32.4986684682817,24.0863712835473,22.7356779135646,65.4190579802325,70.1886195262287,64.805815807263,21.4200614348896,18.7575247155637,40.3350470282295,20.3374454624963,18.1557974704535,23.0644729461112,19.7934340942664,34.2180262537063,24.8813941220186,21.4814344668623,20.2024181651015,47.4939616813869,44.6010082600937,44.1152218023106,33.0043551060216,41.298154984856,36.640524001467,39.4484260396458,27.9399640398137,55.6165421766733,45.7636714006123,38.1813939435769,39.0168403721083,30.3071501655902,29.253181987862,28.8094990971121,34.6319624264178,62.4969736708779,69.4839349209731,61.6634793688436,33.1401236056803,31.661018097448,36.012412292203,33.3810077175146,25.9728785906573,28.6936829970524,26.0438018120457,22.2666923161684,28.1404475104878,26.9878153858108,24.4609521477852,18.6458261955468,17.6901984784652,18.2226595691572,12.7496097822353,18.9260953707715,45.8954571211609,12.5559137533843,24.3294521330461,46.0702621156105,35.7644474665075,36.7272264767966,28.6390604965146,30.4657920067472,25.3000082729704,28.4717436926707,25.5283379822217,27.8982081768299,24.4716460610616,22.6158341058179,30.5598598942435,17.0749059401008,16.3295844068581,35.6575653791794,43.0716892538678,31.5581659884625,27.2892779312721,30.2565879981496,30.9298965716305,25.5475609981999,18.3036583494707,15.5428740562961,17.5223972768957,7.70776830426587,39.041754737566,41.670506963999,37.3271106558857,39.1520034279811,31.835385087319,32.0828573244589,26.1803485080238,25.4552306036806,22.5140358814227,18.6898668485561,17.8627654880882,20.9065240986756,19.4485736019276,18.8367284198008,8.20153986317724,24.2026679118252,48.8887842367851,51.1710026027961,47.5286240170527,42.2442446919304,29.4811013097596,27.6130623427776,24.3917059822249,31.6846639653444,30.3406624818822,33.0071371120998,27.529036872244,24.866637388689,20.8294644357377,18.0949540727127,11.9659250440116,14.2611639175521,20.4193192265502,21.8348802383397,22.0357970793342,33.2787939114651,10.3513080153793,32.8128548192907,41.3865068954437,30.5901224780574,32.4997565215471,32.3058077419471,26.0430408325726,32.3848561339915,23.380468632905,28.0654322342032,23.1351347823701,24.6975748262387,21.7240036474051,34.206261464251,23.095817216155,14.6019652173959,36.4170954232472,28.7207379116513,26.0275010063139,14.1744908582771,20.5981549122431,22.224833212467,27.6285634402904,24.9548164869305,19.2782422340848,18.9753495434998,15.470331487228,26.5542892487955,42.8545403794518,21.3441828241545,29.3641737993281,28.7291178500483,24.4365280114837,20.5686275752651,16.1366423030738,28.395276675709,30.7156502752539,15.2164594657924,21.4352128823924,28.9021323785671,29.4930202898682,27.097522088712,29.381221054366,20.4036585640896,20.7676338251771,30.7567585436135,35.4985412896743,37.9648781107909,46.338640423154,44.2889297816122,35.2318386738045,58.3026014878924,60.5989788561439,52.7923899932899,16.2294005062569,47.924903027542,34.767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| |phase1_expression=32.3500671151684,24.7772539423946,24.5699589270349,35.3883127228991,40.0716583957078,40.6267838026773,40.6485994636215,53.5861792282542,88.8376836777017,106.733424002829,50.851736562975,46.6667130122718,55.1266350378482,54.9000127191304,49.6333545105337,66.4118877038629,81.149177862865,43.6915099021159,42.0941311169618,44.5609134387932,37.4190476664707,43.6880185283895,57.7251533997047,28.9586285256066,24.31738379312,21.2465826722557,29.7225777349762,31.8897424375116,24.893067948785,20.4144405105544,32.1509240450192,23.4961349180064,28.9080450164748,15.8481681015439,33.5067878911479,43.885946374642,43.8964115964094,38.0863783970586,44.5361146378566,48.6877081895632,32.3527318417058,33.4692287629638,32.5291936530873,18.758625878361,19.8698785190249,18.7217687204915,4.69434806608824,7.63088047331563,4.61340983742391,6.61061656852564,9.09911740564856,4.31257693094915,73.6565640593463,77.6137491952139,69.9075102216325,16.7218633423366,19.1977404758967,21.6582278756526,23.0640765379941,16.398720357433,28.5224131577781,8.13226876965917,8.89294796111139,3.5995988691256,2.96659908770092,5.6838409195688,3.89480143673926,5.37905627450176,37.5356396556689,29.8363123713036,42.9062921156819,18.5673139862472,15.9025349485162,43.8517061189535,29.999632428708,27.5765635983006,22.0231761998777,17.2377906415003,21.0440950561054,29.0149833006426,27.1718301499157,32.2966289745191,16.7509799400829,20.8222165711722,20.1693687065389,25.6326869362091,26.4811326286331,34.6702969235059,33.319525066601,32.8736286464517,69.277612799701,27.5335640634044,21.759082678648,14.5719861742211,11.0461990966104,8.51251085484938,15.308441794361,23.68981483835,34.8113246167844,30.3872034078893,30.1404918322096,35.931413676009,53.5091003383956,28.4426681261332,30.5252367825812,37.2439002248395,30.8369911459018,21.8091210263405,29.5189187357776,23.4538579722423,34.1766093729288,24.3572382649713,25.8289356926786,24.8692356911827,29.1619993696548,23.8766523526383,22.0003521283593,19.8101118980279,30.9613693182456,33.1622042392189,32.0220201767571,34.911018225736,20.5030937339934,32.4986684682817,24.0863712835473,22.7356779135646,65.4190579802325,70.1886195262287,64.805815807263,21.4200614348896,18.7575247155637,40.3350470282295,20.3374454624963,18.1557974704535,23.0644729461112,19.7934340942664,34.2180262537063,24.8813941220186,21.4814344668623,20.2024181651015,47.4939616813869,44.6010082600937,44.1152218023106,33.0043551060216,41.298154984856,36.640524001467,39.4484260396458,27.9399640398137,55.6165421766733,45.7636714006123,38.1813939435769,39.0168403721083,30.3071501655902,29.253181987862,28.8094990971121,34.6319624264178,62.4969736708779,69.4839349209731,61.6634793688436,33.1401236056803,31.661018097448,36.012412292203,33.3810077175146,25.9728785906573,28.6936829970524,26.0438018120457,22.2666923161684,28.1404475104878,26.9878153858108,24.4609521477852,18.6458261955468,17.6901984784652,18.2226595691572,12.7496097822353,18.9260953707715,45.8954571211609,12.5559137533843,24.3294521330461,46.0702621156105,35.7644474665075,36.7272264767966,28.6390604965146,30.4657920067472,25.3000082729704,28.4717436926707,25.5283379822217,27.8982081768299,24.4716460610616,22.6158341058179,30.5598598942435,17.0749059401008,16.3295844068581,35.6575653791794,43.0716892538678,31.5581659884625,27.2892779312721,30.2565879981496,30.9298965716305,25.5475609981999,18.3036583494707,15.5428740562961,17.5223972768957,7.70776830426587,39.041754737566,41.670506963999,37.3271106558857,39.1520034279811,31.835385087319,32.0828573244589,26.1803485080238,25.4552306036806,22.5140358814227,18.6898668485561,17.8627654880882,20.9065240986756,19.4485736019276,18.8367284198008,8.20153986317724,24.2026679118252,48.8887842367851,51.1710026027961,47.5286240170527,42.2442446919304,29.4811013097596,27.6130623427776,24.3917059822249,31.6846639653444,30.3406624818822,33.0071371120998,27.529036872244,24.866637388689,20.8294644357377,18.0949540727127,11.9659250440116,14.2611639175521,20.4193192265502,21.8348802383397,22.0357970793342,33.2787939114651,10.3513080153793,32.8128548192907,41.3865068954437,30.5901224780574,32.4997565215471,32.3058077419471,26.0430408325726,32.3848561339915,23.380468632905,28.0654322342032,23.1351347823701,24.6975748262387,21.7240036474051,34.206261464251,23.095817216155,14.6019652173959,36.4170954232472,28.7207379116513,26.0275010063139,14.1744908582771,20.5981549122431,22.224833212467,27.6285634402904,24.9548164869305,19.2782422340848,18.9753495434998,15.470331487228,26.5542892487955,42.8545403794518,21.3441828241545,29.3641737993281,28.7291178500483,24.4365280114837,20.5686275752651,16.1366423030738,28.395276675709,30.7156502752539,15.2164594657924,21.4352128823924,28.9021323785671,29.4930202898682,27.097522088712,29.381221054366,20.4036585640896,20.7676338251771,30.7567585436135,35.4985412896743,37.9648781107909,46.338640423154,44.2889297816122,35.2318386738045,58.3026014878924,60.5989788561439,52.7923899932899,16.2294005062569,47.924903027542,34.767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| ||
|short_description=p1@Tra2b | |short_description=p1@Tra2b | ||
}} | }} |
Latest revision as of 18:37, 1 October 2015
Short description: | p1@Tra2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tra2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2072 |
Association with transcript: | 0bp_to_NM_009186, uc007ysc.1, uc007ysd.1_5end |
EntrezGene: | Tra2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.08e-08 | 13 |
common lymphoid progenitor | 1.08e-08 | 13 |
hematopoietic cell | 2.18e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.18e-08 | 32 |
hematopoietic stem cell | 2.18e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.18e-08 | 32 |
lymphoid lineage restricted progenitor cell | 2.84e-08 | 12 |
T cell | 1.28e-07 | 11 |
pro-T cell | 1.28e-07 | 11 |
mature alpha-beta T cell | 9.60e-07 | 9 |
alpha-beta T cell | 9.60e-07 | 9 |
immature T cell | 9.60e-07 | 9 |
mature T cell | 9.60e-07 | 9 |
immature alpha-beta T cell | 9.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.11e-10 | 29 |
immune organ | 1.11e-10 | 29 |
anterior region of body | 4.24e-10 | 43 |
thymus | 2.33e-09 | 23 |
neck | 2.33e-09 | 23 |
respiratory system epithelium | 2.33e-09 | 23 |
hemolymphoid system gland | 2.33e-09 | 23 |
pharyngeal epithelium | 2.33e-09 | 23 |
thymic region | 2.33e-09 | 23 |
pharyngeal gland | 2.33e-09 | 23 |
entire pharyngeal arch endoderm | 2.33e-09 | 23 |
thymus primordium | 2.33e-09 | 23 |
early pharyngeal endoderm | 2.33e-09 | 23 |
craniocervical region | 6.19e-09 | 36 |
gland of gut | 9.88e-09 | 24 |
hematopoietic system | 1.92e-08 | 45 |
blood island | 1.92e-08 | 45 |
segment of respiratory tract | 1.98e-08 | 27 |
mixed endoderm/mesoderm-derived structure | 2.45e-08 | 35 |
pharynx | 2.50e-08 | 24 |
upper respiratory tract | 2.50e-08 | 24 |
chordate pharynx | 2.50e-08 | 24 |
pharyngeal arch system | 2.50e-08 | 24 |
pharyngeal region of foregut | 2.50e-08 | 24 |
hemolymphoid system | 5.29e-08 | 48 |
immune system | 5.29e-08 | 48 |
respiratory tract | 6.89e-08 | 41 |
respiratory system | 1.59e-07 | 42 |