FFCP PHASE1:Mm9::chr11:58660655..58660728,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100502966 | |EntrezGene=100502966 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=113 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NC63 | |UniProt=Q5NC63 | ||
|association_with_transcript=0bp_to_ENSMUST00000139337,ENSMUST00000143407_5end | |association_with_transcript=0bp_to_ENSMUST00000139337,ENSMUST00000143407_5end | ||
|cluster_id=chr11:58660655..58660728,+ | |||
|description=CAGE_peak_1_at_LOC100502966_5end | |description=CAGE_peak_1_at_LOC100502966_5end | ||
|id=chr11:58660655..58660728,+ | |id=chr11:58660655..58660728,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.58e-20!94;UBERON:0007811!4.91e-19!86;UBERON:0000475!3.98e-14!200;UBERON:0000033!5.62e-14!63;UBERON:0003056!2.04e-12!49;UBERON:0000955!7.28e-12!50;UBERON:0006238!7.28e-12!50;UBERON:0002616!2.70e-11!49;UBERON:0001049!5.55e-11!52;UBERON:0005068!5.55e-11!52;UBERON:0006241!5.55e-11!52;UBERON:0007135!5.55e-11!52;UBERON:0002346!6.97e-11!71;UBERON:0003075!6.97e-11!71;UBERON:0007284!6.97e-11!71;UBERON:0003080!2.54e-10!40;UBERON:0002780!7.67e-10!39;UBERON:0001890!7.67e-10!39;UBERON:0006240!7.67e-10!39;UBERON:0000477!2.20e-08!154;UBERON:0002791!2.67e-08!29;UBERON:0003528!2.67e-08!29;UBERON:0001893!2.67e-08!29;UBERON:0002020!3.29e-08!34;UBERON:0001017!5.56e-08!73;UBERON:0005743!5.56e-08!73;UBERON:0000468!1.55e-07!333;UBERON:0000073!4.53e-07!75;UBERON:0001016!4.53e-07!75;UBERON:0004121!4.57e-07!102;UBERON:0000924!4.57e-07!102;UBERON:0006601!4.57e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.58e-12,64;UBERON:0003075,1.58e-12,64;UBERON:0007284,1.58e-12,64;UBERON:0003056,1.96e-12,49;UBERON:0010371,1.78e-11,73;UBERON:0000073,2.38e-11,54;UBERON:0000955,3.47e-11,47;UBERON:0006238,3.47e-11,47;UBERON:0001049,5.44e-11,52;UBERON:0005068,5.44e-11,52;UBERON:0006241,5.44e-11,52;UBERON:0007135,5.44e-11,52;UBERON:0002616,1.27e-10,46;UBERON:0003080,2.44e-10,40;UBERON:0002780,7.37e-10,39;UBERON:0001890,7.37e-10,39;UBERON:0006240,7.37e-10,39;UBERON:0003528,2.56e-08,29;UBERON:0002791,2.56e-08,29;UBERON:0001893,2.56e-08,29;UBERON:0002020,3.17e-08,34;UBERON:0001017,5.08e-08,73;UBERON:0004121,6.30e-08,95;UBERON:0000924,6.30e-08,95;UBERON:0006601,6.30e-08,95;UBERON:0000153,1.50e-07,43;UBERON:0001016,4.17e-07,75;UBERON:0007811,5.99e-07,36 | |||
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| ||
|short_description=p1@LOC100502966 | |short_description=p1@LOC100502966 | ||
}} | }} |
Latest revision as of 18:53, 1 October 2015
Short description: | p1@LOC100502966 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100502966_5end |
Coexpression cluster: | MCL_coexpression_mm9:113 |
Association with transcript: | 0bp_to_ENSMUST00000139337, ENSMUST00000143407_5end |
EntrezGene: | LOC100502966 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.58e-12 | 64 |
neural plate | 1.58e-12 | 64 |
presumptive neural plate | 1.58e-12 | 64 |
pre-chordal neural plate | 1.96e-12 | 49 |
ecto-epithelium | 1.78e-11 | 73 |
regional part of nervous system | 2.38e-11 | 54 |
brain | 3.47e-11 | 47 |
future brain | 3.47e-11 | 47 |
neural tube | 5.44e-11 | 52 |
neural rod | 5.44e-11 | 52 |
future spinal cord | 5.44e-11 | 52 |
neural keel | 5.44e-11 | 52 |
regional part of brain | 1.27e-10 | 46 |
anterior neural tube | 2.44e-10 | 40 |
regional part of forebrain | 7.37e-10 | 39 |
forebrain | 7.37e-10 | 39 |
future forebrain | 7.37e-10 | 39 |
brain grey matter | 2.56e-08 | 29 |
regional part of telencephalon | 2.56e-08 | 29 |
telencephalon | 2.56e-08 | 29 |
gray matter | 3.17e-08 | 34 |
central nervous system | 5.08e-08 | 73 |
ectoderm-derived structure | 6.30e-08 | 95 |
ectoderm | 6.30e-08 | 95 |
presumptive ectoderm | 6.30e-08 | 95 |
anterior region of body | 1.50e-07 | 43 |
nervous system | 4.17e-07 | 75 |
craniocervical region | 5.99e-07 | 36 |