FFCP PHASE1:Mm9::chr19:10379344..10379355,-: Difference between revisions
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|id=chr19:10379344..10379355,-
|short_description=p2@Dagla
|description=CAGE_peak_2_at_Dagla_5end
|association_with_transcript=0bp_to_ENSMUST00000125567_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=269060 | |EntrezGene=269060 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000125567_5end | |||
|cluster_id=chr19:10379344..10379355,- | |||
|description=CAGE_peak_2_at_Dagla_5end | |||
|id=chr19:10379344..10379355,- | |||
|ontology_enrichment_celltype=CL:0000221!7.21e-13!44;CL:0000133!7.21e-13!44;CL:0000540!2.94e-12!33;CL:0000047!2.94e-12!33;CL:0000031!2.94e-12!33;CL:0000404!2.94e-12!33;CL:0002319!3.03e-12!43;CL:0000393!1.87e-09!39;CL:0000211!1.87e-09!39;CL:0000055!1.97e-09!50;CL:0000107!3.37e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.15e-32,9;CL:0000540,2.13e-21,33;CL:0000047,2.13e-21,33;CL:0000031,2.13e-21,33;CL:0000404,2.13e-21,33;CL:0002319,1.27e-20,43;CL:0000221,4.46e-20,44;CL:0000133,4.46e-20,44;CL:0000393,1.18e-17,39;CL:0000211,1.18e-17,39;CL:0002321,2.23e-11,70;CL:0002610,2.46e-10,3;CL:0000217,6.47e-08,2;CL:0000328,6.47e-08,2;CL:0002573,6.47e-08,2;CL:0002376,6.47e-08,2;CL:0000218,6.47e-08,2;CL:0000692,6.47e-08,2;CL:0002377,6.47e-08,2;CL:0002375,6.47e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.96e-26!75;UBERON:0001016!8.96e-26!75;UBERON:0001017!3.93e-24!73;UBERON:0005743!3.93e-24!73;UBERON:0004121!4.29e-22!102;UBERON:0000924!4.29e-22!102;UBERON:0006601!4.29e-22!102;UBERON:0002346!1.48e-13!71;UBERON:0003075!1.48e-13!71;UBERON:0007284!1.48e-13!71;UBERON:0001049!8.98e-13!52;UBERON:0005068!8.98e-13!52;UBERON:0006241!8.98e-13!52;UBERON:0007135!8.98e-13!52;UBERON:0000955!2.37e-12!50;UBERON:0006238!2.37e-12!50;UBERON:0000033!4.35e-12!63;UBERON:0002616!8.02e-12!49;UBERON:0000010!9.21e-11!11;UBERON:0002020!1.09e-10!34;UBERON:0002410!3.37e-09!9;UBERON:0003080!1.14e-08!40;UBERON:0002791!2.34e-08!29;UBERON:0003528!2.34e-08!29;UBERON:0001893!2.34e-08!29;UBERON:0002780!2.86e-08!39;UBERON:0001890!2.86e-08!39;UBERON:0006240!2.86e-08!39;UBERON:0003056!8.23e-08!49;UBERON:0002021!1.60e-07!10;UBERON:0000411!1.60e-07!10;UBERON:0001950!1.60e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.52e-39,11;UBERON:0002410,1.15e-32,9;UBERON:0001016,2.22e-27,75;UBERON:0001017,1.70e-23,73;UBERON:0004121,9.73e-21,95;UBERON:0000924,9.73e-21,95;UBERON:0006601,9.73e-21,95;UBERON:0000011,2.82e-12,3;UBERON:0010313,7.63e-12,3;UBERON:0002342,7.63e-12,3;UBERON:0002005,7.63e-12,3;UBERON:0005428,7.63e-12,3;UBERON:0005062,7.63e-12,3;UBERON:0000013,9.75e-12,3;UBERON:0000073,5.88e-11,54;UBERON:0004684,2.46e-10,3;UBERON:0002275,2.46e-10,3;UBERON:0002346,4.05e-09,64;UBERON:0003075,4.05e-09,64;UBERON:0007284,4.05e-09,64;UBERON:0011216,6.46e-08,194;UBERON:0010371,1.21e-07,73;UBERON:0001049,4.67e-07,52;UBERON:0005068,4.67e-07,52;UBERON:0006241,4.67e-07,52;UBERON:0007135,4.67e-07,52;UBERON:0002616,6.92e-07,46 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0.889294796111139,0,0,0,0.599200221036809,0,0.103689612308478,0,0,0.285650984403804,1.32521124570968,0,0,0,1.10115880999389,1.65993539510744,1.84327839907492,0.131886287730194,0.365950574409639,0,1.3959149950069,1.68828783009504,0.61119299110724,0.294628585473668,0.711858403995515,0.745597783301202,2.42323818666189,2.94729084416464,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.461230994512117,0.301445281105245,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0,0,0,3.80615036115011,6.0739544975902,0,0,0,0,0.449371918214468,0.457500602818626,0.628271760564322,0.695297280769106,0.767146371990992,1.87009240103604,1.29793010454206,0,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0.187403449119458,0,0,0.378212160335639,0.175951124163949,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,3.15434922846191,0.514523061896422,0,0,0.853153002140936,0.696710015581316,0.77320476793256,0,0.667134131534611,0,0,0,0.251335208800269,0,0.779856348476481,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0,0.642202359951168,0.937693492737625,0.163934945376675,0,13.2513452154828,6.24701990874622,14.6487910458303,16.010909462821,14.704712489438,16.9845918473299,9.31064613852257,7.59865230569411,10.2774822266096,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0,0,0,0,0.564751842617067,2.30162618253588,0.572895513439397,0.515559547031063,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.282328141245992,0,0,0,0,0,0.355905054372522,0.197008964751127,0,0,0.578719832943424,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0 | |phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0.889294796111139,0,0,0,0.599200221036809,0,0.103689612308478,0,0,0.285650984403804,1.32521124570968,0,0,0,1.10115880999389,1.65993539510744,1.84327839907492,0.131886287730194,0.365950574409639,0,1.3959149950069,1.68828783009504,0.61119299110724,0.294628585473668,0.711858403995515,0.745597783301202,2.42323818666189,2.94729084416464,0,0,0,0,0,0,0.280888840263504,0,0,0,0.985903938436763,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0.461230994512117,0.301445281105245,0.117588707135705,0,0,0.289198713839823,0,0.323533699894818,0,0,0,3.80615036115011,6.0739544975902,0,0,0,0,0.449371918214468,0.457500602818626,0.628271760564322,0.695297280769106,0.767146371990992,1.87009240103604,1.29793010454206,0,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0.150704817835715,0,0,0.187403449119458,0,0,0.378212160335639,0.175951124163949,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0,3.15434922846191,0.514523061896422,0,0,0.853153002140936,0.696710015581316,0.77320476793256,0,0.667134131534611,0,0,0,0.251335208800269,0,0.779856348476481,0,0,0,0,0.228497025219458,0,0,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0,0.642202359951168,0.937693492737625,0.163934945376675,0,13.2513452154828,6.24701990874622,14.6487910458303,16.010909462821,14.704712489438,16.9845918473299,9.31064613852257,7.59865230569411,10.2774822266096,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0,0,0,0,0.564751842617067,2.30162618253588,0.572895513439397,0.515559547031063,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.282328141245992,0,0,0,0,0,0.355905054372522,0.197008964751127,0,0,0.578719832943424,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p2@Dagla | |||
}} | }} |
Latest revision as of 20:30, 1 October 2015
Short description: | p2@Dagla |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dagla_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 0bp_to_ENSMUST00000125567_5end |
EntrezGene: | Dagla |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.15e-32 | 9 |
neuron | 2.13e-21 | 33 |
neuronal stem cell | 2.13e-21 | 33 |
neuroblast | 2.13e-21 | 33 |
electrically signaling cell | 2.13e-21 | 33 |
neural cell | 1.27e-20 | 43 |
ectodermal cell | 4.46e-20 | 44 |
neurectodermal cell | 4.46e-20 | 44 |
electrically responsive cell | 1.18e-17 | 39 |
electrically active cell | 1.18e-17 | 39 |
embryonic cell | 2.23e-11 | 70 |
raphe nuclei neuron | 2.46e-10 | 3 |
insulating cell | 6.47e-08 | 2 |
myelin accumulating cell | 6.47e-08 | 2 |
Schwann cell | 6.47e-08 | 2 |
non-myelinating Schwann cell | 6.47e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 6.47e-08 | 2 |
terminal Schwann cell | 6.47e-08 | 2 |
immature Schwann cell | 6.47e-08 | 2 |
Schwann cell precursor | 6.47e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 4.52e-39 | 11 |
autonomic nervous system | 1.15e-32 | 9 |
nervous system | 2.22e-27 | 75 |
central nervous system | 1.70e-23 | 73 |
ectoderm-derived structure | 9.73e-21 | 95 |
ectoderm | 9.73e-21 | 95 |
presumptive ectoderm | 9.73e-21 | 95 |
parasympathetic nervous system | 2.82e-12 | 3 |
neural crest-derived structure | 7.63e-12 | 3 |
neural crest | 7.63e-12 | 3 |
enteric nervous system | 7.63e-12 | 3 |
vagal neural crest | 7.63e-12 | 3 |
neural fold | 7.63e-12 | 3 |
sympathetic nervous system | 9.75e-12 | 3 |
regional part of nervous system | 5.88e-11 | 54 |
raphe nuclei | 2.46e-10 | 3 |
reticular formation | 2.46e-10 | 3 |
neurectoderm | 4.05e-09 | 64 |
neural plate | 4.05e-09 | 64 |
presumptive neural plate | 4.05e-09 | 64 |
organ system subdivision | 6.46e-08 | 194 |
ecto-epithelium | 1.21e-07 | 73 |
neural tube | 4.67e-07 | 52 |
neural rod | 4.67e-07 | 52 |
future spinal cord | 4.67e-07 | 52 |
neural keel | 4.67e-07 | 52 |
regional part of brain | 6.92e-07 | 46 |