FFCP PHASE1:Mm9::chr8:32279171..32279218,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:32279171..32279218,-
|short_description=p1@Mak16
|description=CAGE_peak_1_at_Mak16_5end
|association_with_transcript=0bp_to_ENSMUST00000033983,NM_026453,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67920 | |EntrezGene=67920 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGS0 | |UniProt=Q8BGS0 | ||
|association_with_transcript=0bp_to_ENSMUST00000033983,NM_026453,uc009lji.1_5end | |||
|cluster_id=chr8:32279171..32279218,- | |||
|description=CAGE_peak_1_at_Mak16_5end | |||
|id=chr8:32279171..32279218,- | |||
|ontology_enrichment_celltype=CL:0000988!1.06e-09!32;CL:0002032!1.06e-09!32;CL:0000037!1.06e-09!32;CL:0000566!1.06e-09!32;CL:0000837!1.06e-09!32;CL:0000542!5.59e-09!13;CL:0000051!5.59e-09!13;CL:0000838!6.48e-09!12;CL:0000084!2.84e-08!11;CL:0000827!2.84e-08!11;CL:0000791!4.31e-07!9;CL:0000789!4.31e-07!9;CL:0002420!4.31e-07!9;CL:0002419!4.31e-07!9;CL:0000790!4.31e-07!9;CL:0002031!9.56e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.06e-09,32;CL:0002032,1.06e-09,32;CL:0000037,1.06e-09,32;CL:0000837,1.06e-09,32;CL:0000542,5.59e-09,13;CL:0000051,5.59e-09,13;CL:0000838,6.48e-09,12;CL:0000084,2.84e-08,11;CL:0000827,2.84e-08,11;CL:0000791,4.31e-07,9;CL:0000789,4.31e-07,9;CL:0002420,4.31e-07,9;CL:0002419,4.31e-07,9;CL:0000790,4.31e-07,9;CL:0002031,9.56e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.28e-09!29;UBERON:0000926!1.90e-09!193;UBERON:0004120!1.90e-09!193;UBERON:0006603!1.90e-09!193;UBERON:0000072!6.55e-09!27;UBERON:0000077!2.03e-08!97;UBERON:0001041!2.10e-08!92;UBERON:0002193!2.91e-08!48;UBERON:0001048!4.55e-08!147;UBERON:0000065!5.18e-08!41;UBERON:0001004!5.50e-08!42;UBERON:0002390!6.51e-08!45;UBERON:0003061!6.51e-08!45;UBERON:0002370!7.15e-08!23;UBERON:0000974!7.15e-08!23;UBERON:0004807!7.15e-08!23;UBERON:0005058!7.15e-08!23;UBERON:0003351!7.15e-08!23;UBERON:0009113!7.15e-08!23;UBERON:0003295!7.15e-08!23;UBERON:0009722!7.15e-08!23;UBERON:0005562!7.15e-08!23;UBERON:0007690!7.15e-08!23;UBERON:0003408!9.15e-08!24;UBERON:0006562!1.05e-07!24;UBERON:0001557!1.05e-07!24;UBERON:0001042!1.05e-07!24;UBERON:0008814!1.05e-07!24;UBERON:0009145!1.05e-07!24;UBERON:0003104!1.23e-07!131;UBERON:0009142!1.23e-07!131;UBERON:0005057!3.30e-07!51;UBERON:0002405!3.91e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.28e-09,29;UBERON:0005057,1.28e-09,29;UBERON:0000072,6.55e-09,27;UBERON:0000077,2.60e-08,35;UBERON:0002193,2.91e-08,48;UBERON:0002405,2.91e-08,48;UBERON:0000065,5.18e-08,41;UBERON:0001004,5.50e-08,42;UBERON:0000153,5.59e-08,43;UBERON:0002390,6.51e-08,45;UBERON:0003061,6.51e-08,45;UBERON:0002370,7.15e-08,23;UBERON:0000974,7.15e-08,23;UBERON:0004807,7.15e-08,23;UBERON:0005058,7.15e-08,23;UBERON:0003351,7.15e-08,23;UBERON:0009113,7.15e-08,23;UBERON:0003295,7.15e-08,23;UBERON:0009722,7.15e-08,23;UBERON:0005562,7.15e-08,23;UBERON:0007690,7.15e-08,23;UBERON:0001041,8.46e-08,80;UBERON:0003408,9.15e-08,24;UBERON:0006562,1.05e-07,24;UBERON:0001557,1.05e-07,24;UBERON:0001042,1.05e-07,24;UBERON:0008814,1.05e-07,24;UBERON:0009145,1.05e-07,24;UBERON:0001048,7.19e-07,134;UBERON:0007811,9.83e-07,36 | |||
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| ||
|short_description=p1@Mak16 | |||
}} | }} |
Latest revision as of 21:52, 1 October 2015
Short description: | p1@Mak16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mak16_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000033983, NM_026453, uc009lji.1_5end |
EntrezGene: | Mak16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.06e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.06e-09 | 32 |
hematopoietic stem cell | 1.06e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.06e-09 | 32 |
lymphocyte | 5.59e-09 | 13 |
common lymphoid progenitor | 5.59e-09 | 13 |
lymphoid lineage restricted progenitor cell | 6.48e-09 | 12 |
T cell | 2.84e-08 | 11 |
pro-T cell | 2.84e-08 | 11 |
mature alpha-beta T cell | 4.31e-07 | 9 |
alpha-beta T cell | 4.31e-07 | 9 |
immature T cell | 4.31e-07 | 9 |
mature T cell | 4.31e-07 | 9 |
immature alpha-beta T cell | 4.31e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 9.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.28e-09 | 29 |
immune organ | 1.28e-09 | 29 |
segment of respiratory tract | 6.55e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 2.60e-08 | 35 |
hemolymphoid system | 2.91e-08 | 48 |
immune system | 2.91e-08 | 48 |
respiratory tract | 5.18e-08 | 41 |
respiratory system | 5.50e-08 | 42 |
anterior region of body | 5.59e-08 | 43 |
hematopoietic system | 6.51e-08 | 45 |
blood island | 6.51e-08 | 45 |
thymus | 7.15e-08 | 23 |
neck | 7.15e-08 | 23 |
respiratory system epithelium | 7.15e-08 | 23 |
hemolymphoid system gland | 7.15e-08 | 23 |
pharyngeal epithelium | 7.15e-08 | 23 |
thymic region | 7.15e-08 | 23 |
pharyngeal gland | 7.15e-08 | 23 |
entire pharyngeal arch endoderm | 7.15e-08 | 23 |
thymus primordium | 7.15e-08 | 23 |
early pharyngeal endoderm | 7.15e-08 | 23 |
foregut | 8.46e-08 | 80 |
gland of gut | 9.15e-08 | 24 |
pharynx | 1.05e-07 | 24 |
upper respiratory tract | 1.05e-07 | 24 |
chordate pharynx | 1.05e-07 | 24 |
pharyngeal arch system | 1.05e-07 | 24 |
pharyngeal region of foregut | 1.05e-07 | 24 |
primordium | 7.19e-07 | 134 |
craniocervical region | 9.83e-07 | 36 |