FFCP PHASE1:Mm9::chr19:12576572..12576642,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=207521 | |EntrezGene=207521 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc008gud.1_5end | |association_with_transcript=0bp_to_uc008gud.1_5end | ||
|cluster_id=chr19:12576572..12576642,- | |||
|description=CAGE_peak_1_at_Dtx4_5end | |description=CAGE_peak_1_at_Dtx4_5end | ||
|id=chr19:12576572..12576642,- | |id=chr19:12576572..12576642,- | ||
|ontology_enrichment_celltype=CL:0000540!5.58e-16!33;CL:0000047!5.58e-16!33;CL:0000031!5.58e-16!33;CL:0000404!5.58e-16!33;CL:0000117!5.33e-14!23;CL:0000337!5.33e-14!23;CL:0000393!6.52e-14!39;CL:0000211!6.52e-14!39;CL:0002319!7.32e-14!43;CL:0000221!1.16e-13!44;CL:0000133!1.16e-13!44;CL:0000055!1.52e-11!50 | |ontology_enrichment_celltype=CL:0000540!5.58e-16!33;CL:0000047!5.58e-16!33;CL:0000031!5.58e-16!33;CL:0000404!5.58e-16!33;CL:0000117!5.33e-14!23;CL:0000337!5.33e-14!23;CL:0000393!6.52e-14!39;CL:0000211!6.52e-14!39;CL:0002319!7.32e-14!43;CL:0000221!1.16e-13!44;CL:0000133!1.16e-13!44;CL:0000055!1.52e-11!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.32e-16,33;CL:0000047,5.32e-16,33;CL:0000031,5.32e-16,33;CL:0000404,5.32e-16,33;CL:0000117,5.12e-14,23;CL:0000337,5.12e-14,23;CL:0002319,5.91e-14,43;CL:0000393,6.27e-14,39;CL:0000211,6.27e-14,39;CL:0000221,9.38e-14,44;CL:0000133,9.38e-14,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.62e-20!73;UBERON:0005743!1.62e-20!73;UBERON:0000073!6.61e-19!75;UBERON:0001016!6.61e-19!75;UBERON:0004121!1.22e-17!102;UBERON:0000924!1.22e-17!102;UBERON:0006601!1.22e-17!102;UBERON:0002346!3.71e-16!71;UBERON:0003075!3.71e-16!71;UBERON:0007284!3.71e-16!71;UBERON:0000033!1.60e-13!63;UBERON:0001049!2.15e-13!52;UBERON:0005068!2.15e-13!52;UBERON:0006241!2.15e-13!52;UBERON:0007135!2.15e-13!52;UBERON:0003056!3.84e-13!49;UBERON:0002020!8.07e-13!34;UBERON:0002616!1.12e-11!49;UBERON:0000955!1.63e-11!50;UBERON:0006238!1.63e-11!50;UBERON:0003080!8.75e-10!40;UBERON:0002791!9.81e-10!29;UBERON:0003528!9.81e-10!29;UBERON:0001893!9.81e-10!29;UBERON:0002780!2.20e-09!39;UBERON:0001890!2.20e-09!39;UBERON:0006240!2.20e-09!39;UBERON:0000468!2.97e-09!333;UBERON:0000922!1.05e-07!328 | |ontology_enrichment_uberon=UBERON:0001017!1.62e-20!73;UBERON:0005743!1.62e-20!73;UBERON:0000073!6.61e-19!75;UBERON:0001016!6.61e-19!75;UBERON:0004121!1.22e-17!102;UBERON:0000924!1.22e-17!102;UBERON:0006601!1.22e-17!102;UBERON:0002346!3.71e-16!71;UBERON:0003075!3.71e-16!71;UBERON:0007284!3.71e-16!71;UBERON:0000033!1.60e-13!63;UBERON:0001049!2.15e-13!52;UBERON:0005068!2.15e-13!52;UBERON:0006241!2.15e-13!52;UBERON:0007135!2.15e-13!52;UBERON:0003056!3.84e-13!49;UBERON:0002020!8.07e-13!34;UBERON:0002616!1.12e-11!49;UBERON:0000955!1.63e-11!50;UBERON:0006238!1.63e-11!50;UBERON:0003080!8.75e-10!40;UBERON:0002791!9.81e-10!29;UBERON:0003528!9.81e-10!29;UBERON:0001893!9.81e-10!29;UBERON:0002780!2.20e-09!39;UBERON:0001890!2.20e-09!39;UBERON:0006240!2.20e-09!39;UBERON:0000468!2.97e-09!333;UBERON:0000922!1.05e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.28e-20,73;UBERON:0001016,5.31e-19,75;UBERON:0004121,5.81e-19,95;UBERON:0000924,5.81e-19,95;UBERON:0006601,5.81e-19,95;UBERON:0002346,6.20e-18,64;UBERON:0003075,6.20e-18,64;UBERON:0007284,6.20e-18,64;UBERON:0010371,7.81e-15,73;UBERON:0000073,9.50e-15,54;UBERON:0001049,1.77e-13,52;UBERON:0005068,1.77e-13,52;UBERON:0006241,1.77e-13,52;UBERON:0007135,1.77e-13,52;UBERON:0003056,3.70e-13,49;UBERON:0002020,7.78e-13,34;UBERON:0010314,2.14e-10,92;UBERON:0002616,3.42e-10,46;UBERON:0000955,4.81e-10,47;UBERON:0006238,4.81e-10,47;UBERON:0003080,8.52e-10,40;UBERON:0003528,9.55e-10,29;UBERON:0002791,9.55e-10,29;UBERON:0001893,9.55e-10,29;UBERON:0002780,2.15e-09,39;UBERON:0001890,2.15e-09,39;UBERON:0006240,2.15e-09,39 | |||
|phase1_expression=2.08193501236232,1.39590163055744,2.72999543633722,2.11724947914781,1.00179145989269,8.89760141133016,5.84031601488814,1.80772652818207,0.281577444303333,0,0.171217968225505,0.0797721589953364,1.02720437958723,0.699363219351979,0,0.607425802169478,0,0.630924330716475,1.23402990245165,1.27316895539409,6.4632900514813,2.18440092641948,1.04479915655574,3.83981814704176,2.52350209173887,0,1.29228598847722,4.52489588640367,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,4.04392267651784,2.99222361645286,2.6542016314108,2.51118978442145,0.7813353445238,1.57057123192139,2.35292595212406,1.36609096991689,1.45653105909346,4.65818226509636,3.85232338634155,1.46837401729345,0,11.1192829754028,8.12838876117546,7.97162586204562,6.99932108126813,15.8127820801469,0.671130424230945,0.725362142011344,0,6.17422646486273,15.1862723167541,3.09403255366465,45.5212036934095,38.6163414868584,36.7622214033584,4.40497891689872,2.66788438833342,8.09909745553259,10.8775299882367,2.1314403448383,7.19040265244171,7.30014780110954,9.02099627083756,12.9605700798423,7.99234853135252,26.5655415495537,21.8659855542097,11.3916443269907,14.5685115947719,11.9498442259303,20.9220173898839,13.2794831608595,20.4296689230804,47.2152910074094,51.599030991759,52.091337055676,11.725685958058,19.1339287410771,14.0574387954665,26.5165726926301,31.6065131374009,33.1791013569035,1.06016670666458,1.51143120213571,1.73918693221007,0,0.679971333707751,4.85732872474035,3.24888208723835,0.896053774194671,3.65155492342555,2.38602451609281,1.03914401841148,1.7666978725517,5.0703631119605,6.41632387071589,2.54805239706646,0,0.649473123033642,1.01343946190039,1.01104889002957,4.33898742932428,3.88406825470758,3.26572705942614,2.77576522825817,2.13125834818499,5.30415643688935,4.82312449768392,7.87844337809222,6.03199638382442,0,5.35017620603673,1.76922110389975,5.3383060482645,3.3126227769059,6.30337829075789,3.72783522436244,7.61230072230023,9.21565509979202,3.57639877292028,3.11519323715393,0.599902730993408,3.04968544975355,11.6836698735762,7.77751024791665,10.9319286338192,6.95297280769106,10.2286182932132,11.0127663616567,10.3834408363365,15.4795833052481,5.72272064806428,3.28539585963777,4.62972082950243,15.354212269599,10.3455946995063,17.4660265911189,18.2352829581215,18.0977087742532,18.9608306021578,12.7434345401231,7.24369438069244,0.862271971731369,1.70195472151037,2.11141348996739,2.84954452155847,7.50727572909114,8.358051996532,9.26019613835746,5.57295947091781,3.51106593656617,2.83082697826187,2.55747149456033,1.03562886267751,1.64168241986767,2.16074473753218,2.13070262026689,1.57411385397923,3.85667782218446,0.930135779001631,2.14618721119695,2.80236821681207,2.96207729844265,4.76085645829376,4.70199095365963,4.38599962275997,3.51280184465681,6.03928884421673,10.0939175310781,25.1087254205454,1.98251269790279,2.3800550999719,12.3707185310436,16.2565670302307,12.6290112095651,8.26902450955704,6.67134131534611,4.56541502670142,3.79623249235609,5.92916237006439,5.02670417600539,6.56556357735798,6.82374304916921,7.19055526923377,3.6743468478698,3.98282546508734,2.65535061334314,3.42745537829186,2.25415471346161,2.44381593414377,2.32742984601151,4.69909993265134,2.65593455921881,3.54264355151045,3.29697328466887,2.83813477020141,0.592905254174298,2.33583148002532,2.55526693647164,1.79889689907883,2.63718157805054,3.61765739628625,1.52775511068852,2.30156909960649,2.59416362840057,1.64736847912849,5.75072826109418,4.09355042435354,4.99260276983297,3.78868316920668,4.4849353380478,1.4473305640901,3.14080423283228,3.03186258832776,5.54080919902888,4.75286240170527,6.57132695207806,5.52770649557992,5.47500374037832,5.07347484430277,6.77831119656621,7.30833475840957,7.81328366421687,3.27726629431476,8.97961905702657,8.96824163205372,9.04747703635634,5.98296252200581,3.44234991113325,1.65562047782839,8.34863067936518,10.0802050469295,3.44263385291018,4.79694761688309,9.78075480190396,8.98009111882268,9.04778270477756,10.7535959078648,13.590719119026,13.0215204162863,7.69140333182299,12.5670018901864,13.8350722281283,4.81981974632711,8.09058485687131,9.08134578703002,6.18970445543589,5.27904393512113,6.63725691699814,4.85561272309963,3.62788268357701,5.84675747243284,2.06711325016541,3.07435147943927,3.87642439752332,4.36240475373007,4.63446591900138,2.84433082142234,4.21674434299995,6.18813259489121,3.74483566329167,10.443543453816,5.82114077022395,4.07240366560025,4.25616560741457,6.24290861607247,6.91105886528908,3.65357938937519,1.64270195644597,0.847328283455281,0.661585194164886,6.10079135883476,6.45857706783622,5.42816324353403,2.26807453605959,1.80554989719567,4.08073171281791,10.9400928186201,1.36696704638282,5.15967169908056,4.25947412950337,1.69531611304222,1.77702496037333,1.37266903923914,0.509935289981566,0.559805809294632,0.552799895217695,1.90934123603023,8.22473583310952,7.1161813494397,9.72048067396211,7.94535524854981,7.42432716737004,4.85511646985355,7.10819719237889,5.75863072364865,3.49960427887841,3.106696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|phase1_expression=2.08193501236232,1.39590163055744,2.72999543633722,2.11724947914781,1.00179145989269,8.89760141133016,5.84031601488814,1.80772652818207,0.281577444303333,0,0.171217968225505,0.0797721589953364,1.02720437958723,0.699363219351979,0,0.607425802169478,0,0.630924330716475,1.23402990245165,1.27316895539409,6.4632900514813,2.18440092641948,1.04479915655574,3.83981814704176,2.52350209173887,0,1.29228598847722,4.52489588640367,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,4.04392267651784,2.99222361645286,2.6542016314108,2.51118978442145,0.7813353445238,1.57057123192139,2.35292595212406,1.36609096991689,1.45653105909346,4.65818226509636,3.85232338634155,1.46837401729345,0,11.1192829754028,8.12838876117546,7.97162586204562,6.99932108126813,15.8127820801469,0.671130424230945,0.725362142011344,0,6.17422646486273,15.1862723167541,3.09403255366465,45.5212036934095,38.6163414868584,36.7622214033584,4.40497891689872,2.66788438833342,8.09909745553259,10.8775299882367,2.1314403448383,7.19040265244171,7.30014780110954,9.02099627083756,12.9605700798423,7.99234853135252,26.5655415495537,21.8659855542097,11.3916443269907,14.5685115947719,11.9498442259303,20.9220173898839,13.2794831608595,20.4296689230804,47.2152910074094,51.599030991759,52.091337055676,11.725685958058,19.1339287410771,14.0574387954665,26.5165726926301,31.6065131374009,33.1791013569035,1.06016670666458,1.51143120213571,1.73918693221007,0,0.679971333707751,4.85732872474035,3.24888208723835,0.896053774194671,3.65155492342555,2.38602451609281,1.03914401841148,1.7666978725517,5.0703631119605,6.41632387071589,2.54805239706646,0,0.649473123033642,1.01343946190039,1.01104889002957,4.33898742932428,3.88406825470758,3.26572705942614,2.77576522825817,2.13125834818499,5.30415643688935,4.82312449768392,7.87844337809222,6.03199638382442,0,5.35017620603673,1.76922110389975,5.3383060482645,3.3126227769059,6.30337829075789,3.72783522436244,7.61230072230023,9.21565509979202,3.57639877292028,3.11519323715393,0.599902730993408,3.04968544975355,11.6836698735762,7.77751024791665,10.9319286338192,6.95297280769106,10.2286182932132,11.0127663616567,10.3834408363365,15.4795833052481,5.72272064806428,3.28539585963777,4.62972082950243,15.354212269599,10.3455946995063,17.4660265911189,18.2352829581215,18.0977087742532,18.9608306021578,12.7434345401231,7.24369438069244,0.862271971731369,1.70195472151037,2.11141348996739,2.84954452155847,7.50727572909114,8.358051996532,9.26019613835746,5.57295947091781,3.51106593656617,2.83082697826187,2.55747149456033,1.03562886267751,1.64168241986767,2.16074473753218,2.13070262026689,1.57411385397923,3.85667782218446,0.930135779001631,2.14618721119695,2.80236821681207,2.96207729844265,4.76085645829376,4.70199095365963,4.38599962275997,3.51280184465681,6.03928884421673,10.0939175310781,25.1087254205454,1.98251269790279,2.3800550999719,12.3707185310436,16.2565670302307,12.6290112095651,8.26902450955704,6.67134131534611,4.56541502670142,3.79623249235609,5.92916237006439,5.02670417600539,6.56556357735798,6.82374304916921,7.19055526923377,3.6743468478698,3.98282546508734,2.65535061334314,3.42745537829186,2.25415471346161,2.44381593414377,2.32742984601151,4.69909993265134,2.65593455921881,3.54264355151045,3.29697328466887,2.83813477020141,0.592905254174298,2.33583148002532,2.55526693647164,1.79889689907883,2.63718157805054,3.61765739628625,1.52775511068852,2.30156909960649,2.59416362840057,1.64736847912849,5.75072826109418,4.09355042435354,4.99260276983297,3.78868316920668,4.4849353380478,1.4473305640901,3.14080423283228,3.03186258832776,5.54080919902888,4.75286240170527,6.57132695207806,5.52770649557992,5.47500374037832,5.07347484430277,6.77831119656621,7.30833475840957,7.81328366421687,3.27726629431476,8.97961905702657,8.96824163205372,9.04747703635634,5.98296252200581,3.44234991113325,1.65562047782839,8.34863067936518,10.0802050469295,3.44263385291018,4.79694761688309,9.78075480190396,8.98009111882268,9.04778270477756,10.7535959078648,13.590719119026,13.0215204162863,7.69140333182299,12.5670018901864,13.8350722281283,4.81981974632711,8.09058485687131,9.08134578703002,6.18970445543589,5.27904393512113,6.63725691699814,4.85561272309963,3.62788268357701,5.84675747243284,2.06711325016541,3.07435147943927,3.87642439752332,4.36240475373007,4.63446591900138,2.84433082142234,4.21674434299995,6.18813259489121,3.74483566329167,10.443543453816,5.82114077022395,4.07240366560025,4.25616560741457,6.24290861607247,6.91105886528908,3.65357938937519,1.64270195644597,0.847328283455281,0.661585194164886,6.10079135883476,6.45857706783622,5.42816324353403,2.26807453605959,1.80554989719567,4.08073171281791,10.9400928186201,1.36696704638282,5.15967169908056,4.25947412950337,1.69531611304222,1.77702496037333,1.37266903923914,0.509935289981566,0.559805809294632,0.552799895217695,1.90934123603023,8.22473583310952,7.1161813494397,9.72048067396211,7.94535524854981,7.42432716737004,4.85511646985355,7.10819719237889,5.75863072364865,3.49960427887841,3.106696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| ||
|short_description=p1@Dtx4 | |short_description=p1@Dtx4 | ||
}} | }} |
Latest revision as of 22:27, 1 October 2015
Short description: | p1@Dtx4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dtx4_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_uc008gud.1_5end |
EntrezGene: | Dtx4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.32e-16 | 33 |
neuronal stem cell | 5.32e-16 | 33 |
neuroblast | 5.32e-16 | 33 |
electrically signaling cell | 5.32e-16 | 33 |
CNS neuron (sensu Vertebrata) | 5.12e-14 | 23 |
neuroblast (sensu Vertebrata) | 5.12e-14 | 23 |
neural cell | 5.91e-14 | 43 |
electrically responsive cell | 6.27e-14 | 39 |
electrically active cell | 6.27e-14 | 39 |
ectodermal cell | 9.38e-14 | 44 |
neurectodermal cell | 9.38e-14 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.28e-20 | 73 |
nervous system | 5.31e-19 | 75 |
ectoderm-derived structure | 5.81e-19 | 95 |
ectoderm | 5.81e-19 | 95 |
presumptive ectoderm | 5.81e-19 | 95 |
neurectoderm | 6.20e-18 | 64 |
neural plate | 6.20e-18 | 64 |
presumptive neural plate | 6.20e-18 | 64 |
ecto-epithelium | 7.81e-15 | 73 |
regional part of nervous system | 9.50e-15 | 54 |
neural tube | 1.77e-13 | 52 |
neural rod | 1.77e-13 | 52 |
future spinal cord | 1.77e-13 | 52 |
neural keel | 1.77e-13 | 52 |
pre-chordal neural plate | 3.70e-13 | 49 |
gray matter | 7.78e-13 | 34 |
structure with developmental contribution from neural crest | 2.14e-10 | 92 |
regional part of brain | 3.42e-10 | 46 |
brain | 4.81e-10 | 47 |
future brain | 4.81e-10 | 47 |
anterior neural tube | 8.52e-10 | 40 |
brain grey matter | 9.55e-10 | 29 |
regional part of telencephalon | 9.55e-10 | 29 |
telencephalon | 9.55e-10 | 29 |
regional part of forebrain | 2.15e-09 | 39 |
forebrain | 2.15e-09 | 39 |
future forebrain | 2.15e-09 | 39 |