FFCP PHASE1:Mm9::chr19:14672223..14672239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21888 | |EntrezGene=21888 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=280 | |||
|TSSclassifier=NA | |||
|UniProt=Q62441,Q9WUL2,Q62440,Q5SQA5 | |UniProt=Q62441,Q9WUL2,Q62440,Q5SQA5 | ||
|association_with_transcript=233bp_to_ENSMUST00000052011,NM_011600,uc008gwk.1,uc008gwl.1,uc008gwm.1_5end | |association_with_transcript=233bp_to_ENSMUST00000052011,NM_011600,uc008gwk.1,uc008gwl.1,uc008gwm.1_5end | ||
|cluster_id=chr19:14672223..14672239,- | |||
|description=CAGE_peak_3_at_Tle4_5end | |description=CAGE_peak_3_at_Tle4_5end | ||
|id=chr19:14672223..14672239,- | |id=chr19:14672223..14672239,- | ||
|ontology_enrichment_celltype=CL:0000988!4.13e-08!32;CL:0002032!4.13e-08!32;CL:0000037!4.13e-08!32;CL:0000566!4.13e-08!32;CL:0000837!4.13e-08!32 | |ontology_enrichment_celltype=CL:0000988!4.13e-08!32;CL:0002032!4.13e-08!32;CL:0000037!4.13e-08!32;CL:0000566!4.13e-08!32;CL:0000837!4.13e-08!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.51e-13,32;CL:0002032,1.51e-13,32;CL:0000037,1.51e-13,32;CL:0000837,1.51e-13,32;CL:0000838,2.49e-10,12;CL:0000542,2.64e-09,13;CL:0000051,2.64e-09,13;CL:0000084,3.88e-09,11;CL:0000827,3.88e-09,11;CL:0000738,5.40e-09,17;CL:0002087,5.40e-09,17;CL:0002031,7.76e-09,25;CL:0002320,2.85e-08,46;CL:0000134,2.85e-08,46;CL:0000791,2.10e-07,9;CL:0000789,2.10e-07,9;CL:0002420,2.10e-07,9;CL:0002419,2.10e-07,9;CL:0000790,2.10e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.24e-13!94;UBERON:0007811!1.51e-10!86;UBERON:0002020!4.63e-08!34;UBERON:0002791!8.77e-08!29;UBERON:0003528!8.77e-08!29;UBERON:0001893!8.77e-08!29;UBERON:0002193!1.04e-07!48;UBERON:0002390!3.04e-07!45;UBERON:0003061!3.04e-07!45;UBERON:0002780!3.37e-07!39;UBERON:0001890!3.37e-07!39;UBERON:0006240!3.37e-07!39;UBERON:0001049!8.93e-07!52;UBERON:0005068!8.93e-07!52;UBERON:0006241!8.93e-07!52;UBERON:0007135!8.93e-07!52 | |ontology_enrichment_uberon=UBERON:0000153!3.24e-13!94;UBERON:0007811!1.51e-10!86;UBERON:0002020!4.63e-08!34;UBERON:0002791!8.77e-08!29;UBERON:0003528!8.77e-08!29;UBERON:0001893!8.77e-08!29;UBERON:0002193!1.04e-07!48;UBERON:0002390!3.04e-07!45;UBERON:0003061!3.04e-07!45;UBERON:0002780!3.37e-07!39;UBERON:0001890!3.37e-07!39;UBERON:0006240!3.37e-07!39;UBERON:0001049!8.93e-07!52;UBERON:0005068!8.93e-07!52;UBERON:0006241!8.93e-07!52;UBERON:0007135!8.93e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.29e-09,48;UBERON:0002405,2.29e-09,48;UBERON:0002021,2.83e-09,10;UBERON:0000411,2.83e-09,10;UBERON:0001950,2.83e-09,10;UBERON:0002390,3.06e-09,45;UBERON:0003061,3.06e-09,45;UBERON:0002370,1.88e-08,23;UBERON:0000974,1.88e-08,23;UBERON:0004807,1.88e-08,23;UBERON:0005058,1.88e-08,23;UBERON:0003351,1.88e-08,23;UBERON:0009113,1.88e-08,23;UBERON:0003295,1.88e-08,23;UBERON:0009722,1.88e-08,23;UBERON:0005562,1.88e-08,23;UBERON:0007690,1.88e-08,23;UBERON:0002384,2.85e-08,46;UBERON:0006562,6.31e-08,24;UBERON:0003408,6.31e-08,24;UBERON:0001557,6.31e-08,24;UBERON:0001042,6.31e-08,24;UBERON:0008814,6.31e-08,24;UBERON:0009145,6.31e-08,24;UBERON:0000153,1.46e-07,43;UBERON:0004177,9.96e-07,29;UBERON:0005057,9.96e-07,29 | |||
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| ||
|short_description=p3@Tle4 | |short_description=p3@Tle4 | ||
}} | }} |
Latest revision as of 22:39, 1 October 2015
Short description: | p3@Tle4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tle4_5end |
Coexpression cluster: | MCL_coexpression_mm9:280 |
Association with transcript: | 233bp_to_ENSMUST00000052011, NM_011600, uc008gwk.1, uc008gwl.1, uc008gwm.1_5end |
EntrezGene: | Tle4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.51e-13 | 32 |
hematopoietic oligopotent progenitor cell | 1.51e-13 | 32 |
hematopoietic stem cell | 1.51e-13 | 32 |
hematopoietic multipotent progenitor cell | 1.51e-13 | 32 |
lymphoid lineage restricted progenitor cell | 2.49e-10 | 12 |
lymphocyte | 2.64e-09 | 13 |
common lymphoid progenitor | 2.64e-09 | 13 |
T cell | 3.88e-09 | 11 |
pro-T cell | 3.88e-09 | 11 |
leukocyte | 5.40e-09 | 17 |
nongranular leukocyte | 5.40e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 7.76e-09 | 25 |
connective tissue cell | 2.85e-08 | 46 |
mesenchymal cell | 2.85e-08 | 46 |
mature alpha-beta T cell | 2.10e-07 | 9 |
alpha-beta T cell | 2.10e-07 | 9 |
immature T cell | 2.10e-07 | 9 |
mature T cell | 2.10e-07 | 9 |
immature alpha-beta T cell | 2.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.29e-09 | 48 |
immune system | 2.29e-09 | 48 |
occipital lobe | 2.83e-09 | 10 |
visual cortex | 2.83e-09 | 10 |
neocortex | 2.83e-09 | 10 |
hematopoietic system | 3.06e-09 | 45 |
blood island | 3.06e-09 | 45 |
thymus | 1.88e-08 | 23 |
neck | 1.88e-08 | 23 |
respiratory system epithelium | 1.88e-08 | 23 |
hemolymphoid system gland | 1.88e-08 | 23 |
pharyngeal epithelium | 1.88e-08 | 23 |
thymic region | 1.88e-08 | 23 |
pharyngeal gland | 1.88e-08 | 23 |
entire pharyngeal arch endoderm | 1.88e-08 | 23 |
thymus primordium | 1.88e-08 | 23 |
early pharyngeal endoderm | 1.88e-08 | 23 |
connective tissue | 2.85e-08 | 46 |
pharynx | 6.31e-08 | 24 |
gland of gut | 6.31e-08 | 24 |
upper respiratory tract | 6.31e-08 | 24 |
chordate pharynx | 6.31e-08 | 24 |
pharyngeal arch system | 6.31e-08 | 24 |
pharyngeal region of foregut | 6.31e-08 | 24 |
anterior region of body | 1.46e-07 | 43 |
hemopoietic organ | 9.96e-07 | 29 |
immune organ | 9.96e-07 | 29 |