FFCP PHASE1:Mm9::chr8:41596652..41596700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18983 | |EntrezGene=18983 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=643 | |||
|TSSclassifier=NA | |||
|UniProt=Q60809,Q543X5 | |UniProt=Q60809,Q543X5 | ||
|association_with_transcript=0bp_to_ENSMUST00000139558,ENSMUST00000149992,NM_011135,uc009lmq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000139558,ENSMUST00000149992,NM_011135,uc009lmq.1_5end | ||
|cluster_id=chr8:41596652..41596700,- | |||
|description=CAGE_peak_2_at_Cnot7_5end | |description=CAGE_peak_2_at_Cnot7_5end | ||
|id=chr8:41596652..41596700,- | |id=chr8:41596652..41596700,- | ||
|ontology_enrichment_celltype=CL:0000540!2.31e-15!33;CL:0000047!2.31e-15!33;CL:0000031!2.31e-15!33;CL:0000404!2.31e-15!33;CL:0000393!2.11e-13!39;CL:0000211!2.11e-13!39;CL:0000117!4.99e-12!23;CL:0000337!4.99e-12!23;CL:0000221!3.47e-11!44;CL:0000133!3.47e-11!44;CL:0002319!6.70e-11!43;CL:0000055!2.82e-09!50 | |ontology_enrichment_celltype=CL:0000540!2.31e-15!33;CL:0000047!2.31e-15!33;CL:0000031!2.31e-15!33;CL:0000404!2.31e-15!33;CL:0000393!2.11e-13!39;CL:0000211!2.11e-13!39;CL:0000117!4.99e-12!23;CL:0000337!4.99e-12!23;CL:0000221!3.47e-11!44;CL:0000133!3.47e-11!44;CL:0002319!6.70e-11!43;CL:0000055!2.82e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.72e-15,33;CL:0000047,1.72e-15,33;CL:0000031,1.72e-15,33;CL:0000404,1.72e-15,33;CL:0000393,1.65e-13,39;CL:0000211,1.65e-13,39;CL:0000117,4.00e-12,23;CL:0000337,4.00e-12,23;CL:0000221,3.19e-11,44;CL:0000133,3.19e-11,44;CL:0002319,6.20e-11,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.15e-23!73;UBERON:0005743!3.15e-23!73;UBERON:0000073!9.12e-22!75;UBERON:0001016!9.12e-22!75;UBERON:0002346!1.03e-20!71;UBERON:0003075!1.03e-20!71;UBERON:0007284!1.03e-20!71;UBERON:0004121!3.96e-20!102;UBERON:0000924!3.96e-20!102;UBERON:0006601!3.96e-20!102;UBERON:0000033!1.38e-19!63;UBERON:0003056!5.94e-19!49;UBERON:0001049!3.86e-18!52;UBERON:0005068!3.86e-18!52;UBERON:0006241!3.86e-18!52;UBERON:0007135!3.86e-18!52;UBERON:0000955!2.41e-17!50;UBERON:0006238!2.41e-17!50;UBERON:0002616!9.36e-17!49;UBERON:0003080!4.17e-16!40;UBERON:0002780!8.93e-16!39;UBERON:0001890!8.93e-16!39;UBERON:0006240!8.93e-16!39;UBERON:0002020!1.40e-15!34;UBERON:0000153!5.94e-15!94;UBERON:0002791!2.81e-13!29;UBERON:0003528!2.81e-13!29;UBERON:0001893!2.81e-13!29;UBERON:0007811!5.16e-13!86;UBERON:0000956!1.90e-10!21;UBERON:0001869!1.90e-10!21;UBERON:0000203!1.90e-10!21;UBERON:0000468!8.68e-09!333;UBERON:0002619!4.06e-08!17;UBERON:0000922!1.11e-07!328 | |ontology_enrichment_uberon=UBERON:0001017!3.15e-23!73;UBERON:0005743!3.15e-23!73;UBERON:0000073!9.12e-22!75;UBERON:0001016!9.12e-22!75;UBERON:0002346!1.03e-20!71;UBERON:0003075!1.03e-20!71;UBERON:0007284!1.03e-20!71;UBERON:0004121!3.96e-20!102;UBERON:0000924!3.96e-20!102;UBERON:0006601!3.96e-20!102;UBERON:0000033!1.38e-19!63;UBERON:0003056!5.94e-19!49;UBERON:0001049!3.86e-18!52;UBERON:0005068!3.86e-18!52;UBERON:0006241!3.86e-18!52;UBERON:0007135!3.86e-18!52;UBERON:0000955!2.41e-17!50;UBERON:0006238!2.41e-17!50;UBERON:0002616!9.36e-17!49;UBERON:0003080!4.17e-16!40;UBERON:0002780!8.93e-16!39;UBERON:0001890!8.93e-16!39;UBERON:0006240!8.93e-16!39;UBERON:0002020!1.40e-15!34;UBERON:0000153!5.94e-15!94;UBERON:0002791!2.81e-13!29;UBERON:0003528!2.81e-13!29;UBERON:0001893!2.81e-13!29;UBERON:0007811!5.16e-13!86;UBERON:0000956!1.90e-10!21;UBERON:0001869!1.90e-10!21;UBERON:0000203!1.90e-10!21;UBERON:0000468!8.68e-09!333;UBERON:0002619!4.06e-08!17;UBERON:0000922!1.11e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.46e-23,73;UBERON:0002346,6.26e-23,64;UBERON:0003075,6.26e-23,64;UBERON:0007284,6.26e-23,64;UBERON:0001016,6.83e-22,75;UBERON:0004121,2.49e-21,95;UBERON:0000924,2.49e-21,95;UBERON:0006601,2.49e-21,95;UBERON:0010371,2.10e-20,73;UBERON:0000073,2.44e-19,54;UBERON:0003056,4.11e-19,49;UBERON:0001049,2.72e-18,52;UBERON:0005068,2.72e-18,52;UBERON:0006241,2.72e-18,52;UBERON:0007135,2.72e-18,52;UBERON:0000955,7.86e-17,47;UBERON:0006238,7.86e-17,47;UBERON:0003080,3.06e-16,40;UBERON:0002616,3.07e-16,46;UBERON:0010314,4.05e-16,92;UBERON:0002780,6.61e-16,39;UBERON:0001890,6.61e-16,39;UBERON:0006240,6.61e-16,39;UBERON:0002020,1.04e-15,34;UBERON:0003528,2.19e-13,29;UBERON:0002791,2.19e-13,29;UBERON:0001893,2.19e-13,29;UBERON:0000956,1.58e-10,21;UBERON:0001869,1.58e-10,21;UBERON:0000203,1.58e-10,21;UBERON:0002619,3.53e-08,17;UBERON:0000922,1.55e-07,320 | |||
|phase1_expression=5.92550734287738,1.74487703819681,2.27499619694768,2.11724947914781,2.00358291978539,2.18243053485457,1.63528848416868,1.16210991097419,0.422366166455,0.468129052643987,0.34243593645101,0.797721589953364,2.9104124088305,2.71003247498892,0,0.404950534779652,0,1.26184866143295,1.23402990245165,0.84877930359606,11.1406710097901,1.48936426801328,1.04479915655574,2.23989391910769,1.60586496747019,1.14846392823004,2.15380998079537,2.15471232685889,1.52018735565099,2.52030129759931,1.10865255327652,0,2.46025915033828,0,0.577703239502549,0.997407872150954,2.04169356262369,0.837063261473815,0.7813353445238,0,0.588231488031014,0,0,4.28049181116963,2.73717714292689,5.87349606917381,3.12956537739216,2.18025156380447,4.83309602015838,3.88859798148567,2.2397827460058,0,2.01339127269284,0,0,1.80081605225163,2.0057340795713,2.06268836910977,16.589949790487,14.2827564403449,16.4796164911607,1.0165335962074,0,0,0,0,2.69640099466564,2.68952813725088,25.5076446278855,23.8960510847092,23.135745748652,5.42736870367227,7.50953039235486,28.4178654178693,26.6450409430697,17.4651569455904,5.50579404996943,5.2351808614927,5.9906547969935,25.190280956467,21.1336456721566,29.1711487511786,3.35019598801657,7.31591393041184,7.94550888439413,8.83885756421003,9.5389026135399,15.2847545576746,1.13589289999776,0.982430281388212,1.73918693221007,0.860423876981386,0,0,0.649776417447669,0.448026887097336,1.40444420131752,1.02258193546835,0.779358013808606,1.41335829804136,6.05626705039726,5.13305909657271,0,0,3.030874574157,2.78695852022608,2.02209778005913,1.7127581957859,4.14300613835475,1.63286352971307,3.29622120855658,3.34912026143355,3.45923245884088,3.01445281105245,3.17489509266403,1.38233250462643,2.22475470960936,1.01219549843938,0,2.58826959915855,0.662524555381181,0.969750506270444,0,5.85561594023094,5.44561437714983,0.766371165625774,0.718890747035522,0,0.635351135365324,6.44099749440738,2.74500361691176,31.0366249718775,7.82209440865244,7.67146371990992,6.64921742590592,7.13861557498134,6.21220119486929,2.36373244159177,5.81262344397452,2.52530227063769,5.07469727554544,7.58676944630461,8.28285797104606,7.83665052745718,10.2054748726992,9.86475646193343,9.18276900685342,3.88055056108524,5.38919982332106,12.4810012910761,9.32540958068929,5.91828477554452,5.56094498451196,4.87553033131033,3.2925141825271,5.7719937377363,0,0,0,3.72826390563903,4.22146907965973,2.70093092191522,4.7348947117042,4.13204886669548,2.77680803197281,2.32533944750408,2.95100741539581,3.26942958628075,3.29119699826961,1.80584210487005,1.13496333364198,1.02339991197733,2.41505126820156,0.939444931322602,7.36014819974445,30.8713837137853,0.330418782983798,0.528901133327089,6.18535926552179,5.34144345279009,4.25262622362908,2.8235693447268,2.2237804384487,1.33157938278791,0.949058123089023,0.823494773620054,2.26201687920243,1.59165177632921,0.974820435595601,0.898819408654221,0.864552199498777,0.597423819763102,3.79335801906163,4.91268604221834,6.76246414038483,5.29493452397817,4.84881217919064,5.19005067188357,5.05892296994058,2.95220295959204,2.66897837330337,1.48076596706161,0.296452627087149,0.83422552858047,1.17935397067922,1.12431056192427,0,1.20588579876208,1.01850340712568,0.575392274901621,1.13494658742525,1.37280706594041,0,0.744281895337007,0.624075346229121,0.757736633841335,0.358794827043824,0.482443521363367,0.923765950833023,5.11626811780309,6.84452901056509,4.92260748748046,3.52035372432753,2.1775813467436,1.19021820443007,2.92700471786698,4.09851374676097,2.6575762757853,4.78364305972461,1.14704320301017,1.20879487306127,0.867894351489069,0,0.54390568381871,0.491764273019036,2.48343071674259,4.49541651965817,6.21221938938677,0.983609672260053,0,8.51872192423893,7.41833614163613,7.75524231838076,7.64700153448166,5.34716817797746,5.94460714656548,6.47697122679831,5.84511715822624,7.51046778098395,9.96096080907602,4.82596289708113,4.27357448801413,5.04949573996086,5.1140738121486,0,2.91336763385978,3.02323556964751,3.01768127609437,0.590603785761546,3.68922177532713,3.6179961043551,4.36240475373007,1.42598951353889,1.58018378967908,1.05418608574999,0,3.40439605753788,9.36317688962813,3.75140182969988,7.28745919107414,9.04435191575595,6.24290861607247,8.22745103010605,3.65357938937519,1.17335854031855,2.96564899209348,1.10264199027481,1.6488625294148,4.68246837418126,2.65376869683886,1.90995750405018,1.80554989719567,2.33184669303881,2.59595422814714,0.341741761595705,2.27025554759545,1.66675074632741,1.31857919903284,0.27338845544205,0.915112692826091,0.339956859987711,0.139951452323658,0.414599921413271,0.954670618015114,4.27053591334533,4.87966721104437,3.56417624711944,3.3454127362315,2.62035076495413,2.42755823492677,3.47144514046411,1.83229159388821,1.42576470620972,1.86401793926078,50.7323644815771,7.027277664067,2.64733584731356,5.44463327363333,2.19571699912143,6.25137664315879,5.04636126176742,7.03103678157331,13.1074180532139,27.5405897741647,28.8030006257865,1.89606672376907,2.43270258348197,2.67048488628551,2.72833728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| ||
|short_description=p2@Cnot7 | |short_description=p2@Cnot7 | ||
}} | }} |
Latest revision as of 23:44, 1 October 2015
Short description: | p2@Cnot7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cnot7_5end |
Coexpression cluster: | MCL_coexpression_mm9:643 |
Association with transcript: | 0bp_to_ENSMUST00000139558, ENSMUST00000149992, NM_011135, uc009lmq.1_5end |
EntrezGene: | Cnot7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.72e-15 | 33 |
neuronal stem cell | 1.72e-15 | 33 |
neuroblast | 1.72e-15 | 33 |
electrically signaling cell | 1.72e-15 | 33 |
electrically responsive cell | 1.65e-13 | 39 |
electrically active cell | 1.65e-13 | 39 |
CNS neuron (sensu Vertebrata) | 4.00e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.00e-12 | 23 |
ectodermal cell | 3.19e-11 | 44 |
neurectodermal cell | 3.19e-11 | 44 |
neural cell | 6.20e-11 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.46e-23 | 73 |
neurectoderm | 6.26e-23 | 64 |
neural plate | 6.26e-23 | 64 |
presumptive neural plate | 6.26e-23 | 64 |
nervous system | 6.83e-22 | 75 |
ectoderm-derived structure | 2.49e-21 | 95 |
ectoderm | 2.49e-21 | 95 |
presumptive ectoderm | 2.49e-21 | 95 |
ecto-epithelium | 2.10e-20 | 73 |
regional part of nervous system | 2.44e-19 | 54 |
pre-chordal neural plate | 4.11e-19 | 49 |
neural tube | 2.72e-18 | 52 |
neural rod | 2.72e-18 | 52 |
future spinal cord | 2.72e-18 | 52 |
neural keel | 2.72e-18 | 52 |
brain | 7.86e-17 | 47 |
future brain | 7.86e-17 | 47 |
anterior neural tube | 3.06e-16 | 40 |
regional part of brain | 3.07e-16 | 46 |
structure with developmental contribution from neural crest | 4.05e-16 | 92 |
regional part of forebrain | 6.61e-16 | 39 |
forebrain | 6.61e-16 | 39 |
future forebrain | 6.61e-16 | 39 |
gray matter | 1.04e-15 | 34 |
brain grey matter | 2.19e-13 | 29 |
regional part of telencephalon | 2.19e-13 | 29 |
telencephalon | 2.19e-13 | 29 |
cerebral cortex | 1.58e-10 | 21 |
cerebral hemisphere | 1.58e-10 | 21 |
pallium | 1.58e-10 | 21 |
regional part of cerebral cortex | 3.53e-08 | 17 |
embryo | 1.55e-07 | 320 |