FF:10493-107B7: Difference between revisions

Latest revision as of 14:27, 3 June 2020

Name:	mesothelioma cell line:ACC-MESO-1
Species:	Human (Homo sapiens)
Library ID:	CNhs11263
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	mesothelium
dev stage	NA
sex	female
age	61
cell type	mesothelial cell
cell line	ACC-MESO-1
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005627

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11263		CAGE		DRX007936		DRR008808

Accession ID Hg19

Library id		BAM		CTSS
CNhs11263		DRZ000233		DRZ001618

Accession ID Hg38

Library id		BAM		CTSS
CNhs11263		DRZ011583		DRZ012968

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0876
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.104
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0554
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.282
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0721
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.123
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.266
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0183
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.00998
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0377
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.168
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0765
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.248
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.285
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11263

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.167
MA0003.1	MA0003.1	0.64
MA0004.1	MA0004.1	0.483
MA0006.1	MA0006.1	0.668
MA0007.1	MA0007.1	0.823
MA0009.1	MA0009.1	0.58
MA0014.1	MA0014.1	0.0946
MA0017.1	MA0017.1	0.977
MA0018.2	MA0018.2	0.344
MA0019.1	MA0019.1	0.429
MA0024.1	MA0024.1	0.532
MA0025.1	MA0025.1	0.432
MA0027.1	MA0027.1	0.778
MA0028.1	MA0028.1	1.57527e-4
MA0029.1	MA0029.1	0.0324
MA0030.1	MA0030.1	0.0735
MA0031.1	MA0031.1	0.946
MA0035.2	MA0035.2	0.00726
MA0038.1	MA0038.1	0.0354
MA0039.2	MA0039.2	1.65383e-4
MA0040.1	MA0040.1	0.992
MA0041.1	MA0041.1	0.701
MA0042.1	MA0042.1	0.722
MA0043.1	MA0043.1	0.27
MA0046.1	MA0046.1	0.815
MA0047.2	MA0047.2	0.313
MA0048.1	MA0048.1	0.175
MA0050.1	MA0050.1	5.22881e-8
MA0051.1	MA0051.1	9.58328e-9
MA0052.1	MA0052.1	0.616
MA0055.1	MA0055.1	5.41455e-7
MA0057.1	MA0057.1	0.599
MA0058.1	MA0058.1	0.829
MA0059.1	MA0059.1	0.374
MA0060.1	MA0060.1	4.88808e-7
MA0061.1	MA0061.1	0.568
MA0062.2	MA0062.2	2.65946e-4
MA0065.2	MA0065.2	0.811
MA0066.1	MA0066.1	0.944
MA0067.1	MA0067.1	0.45
MA0068.1	MA0068.1	0.0341
MA0069.1	MA0069.1	0.232
MA0070.1	MA0070.1	0.783
MA0071.1	MA0071.1	0.483
MA0072.1	MA0072.1	0.602
MA0073.1	MA0073.1	0.617
MA0074.1	MA0074.1	0.127
MA0076.1	MA0076.1	1.95397e-5
MA0077.1	MA0077.1	0.281
MA0078.1	MA0078.1	0.372
MA0079.2	MA0079.2	0.358
MA0080.2	MA0080.2	3.28273e-10
MA0081.1	MA0081.1	0.022
MA0083.1	MA0083.1	0.516
MA0084.1	MA0084.1	0.16
MA0087.1	MA0087.1	0.123
MA0088.1	MA0088.1	0.438
MA0090.1	MA0090.1	0.00511
MA0091.1	MA0091.1	0.136
MA0092.1	MA0092.1	0.0726
MA0093.1	MA0093.1	0.365
MA0099.2	MA0099.2	2.94515e-6
MA0100.1	MA0100.1	0.493
MA0101.1	MA0101.1	0.0125
MA0102.2	MA0102.2	0.0301
MA0103.1	MA0103.1	0.09
MA0104.2	MA0104.2	0.192
MA0105.1	MA0105.1	0.155
MA0106.1	MA0106.1	0.718
MA0107.1	MA0107.1	0.00625
MA0108.2	MA0108.2	0.0296
MA0111.1	MA0111.1	0.278
MA0112.2	MA0112.2	0.0362
MA0113.1	MA0113.1	0.905
MA0114.1	MA0114.1	0.623
MA0115.1	MA0115.1	0.156
MA0116.1	MA0116.1	0.00977
MA0117.1	MA0117.1	0.872
MA0119.1	MA0119.1	0.303
MA0122.1	MA0122.1	0.634
MA0124.1	MA0124.1	0.844
MA0125.1	MA0125.1	0.734
MA0131.1	MA0131.1	0.118
MA0135.1	MA0135.1	0.0277
MA0136.1	MA0136.1	5.29478e-7
MA0137.2	MA0137.2	0.164
MA0138.2	MA0138.2	0.00317
MA0139.1	MA0139.1	0.866
MA0140.1	MA0140.1	0.00719
MA0141.1	MA0141.1	0.638
MA0142.1	MA0142.1	0.294
MA0143.1	MA0143.1	0.457
MA0144.1	MA0144.1	0.944
MA0145.1	MA0145.1	0.327
MA0146.1	MA0146.1	0.235
MA0147.1	MA0147.1	0.145
MA0148.1	MA0148.1	0.574
MA0149.1	MA0149.1	0.0378
MA0150.1	MA0150.1	0.0269
MA0152.1	MA0152.1	0.746
MA0153.1	MA0153.1	0.857
MA0154.1	MA0154.1	0.00896
MA0155.1	MA0155.1	0.516
MA0156.1	MA0156.1	0.86
MA0157.1	MA0157.1	0.468
MA0159.1	MA0159.1	0.577
MA0160.1	MA0160.1	0.225
MA0162.1	MA0162.1	0.93
MA0163.1	MA0163.1	0.0126
MA0164.1	MA0164.1	0.345
MA0258.1	MA0258.1	0.271
MA0259.1	MA0259.1	0.0766

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11263

Novel motif	Logo	P-value
1	1	0.741
10	10	0.319
100	100	0.178
101	101	0.0558
102	102	0.592
103	103	0.327
104	104	0.79
105	105	0.886
106	106	0.00231
107	107	0.153
108	108	0.269
109	109	0.178
11	11	0.217
110	110	0.928
111	111	0.156
112	112	0.00776
113	113	0.186
114	114	0.957
115	115	0.561
116	116	0.2
117	117	0.544
118	118	0.0562
119	119	0.602
12	12	0.584
120	120	0.655
121	121	0.516
122	122	0.177
123	123	0.785
124	124	0.544
125	125	0.167
126	126	0.545
127	127	0.33
128	128	0.0289
129	129	0.94
13	13	0.212
130	130	0.579
131	131	0.392
132	132	0.658
133	133	0.0987
134	134	0.183
135	135	0.137
136	136	0.0292
137	137	0.236
138	138	0.306
139	139	0.458
14	14	0.239
140	140	0.0559
141	141	0.722
142	142	0.078
143	143	0.658
144	144	0.852
145	145	0.00483
146	146	0.934
147	147	0.664
148	148	0.646
149	149	0.16
15	15	0.227
150	150	0.334
151	151	0.356
152	152	0.352
153	153	0.463
154	154	0.235
155	155	0.214
156	156	0.337
157	157	0.589
158	158	0.784
159	159	0.194
16	16	0.213
160	160	0.174
161	161	0.967
162	162	0.624
163	163	0.919
164	164	0.32
165	165	0.517
166	166	0.662
167	167	0.656
168	168	0.254
169	169	0.888
17	17	0.461
18	18	0.727
19	19	0.177
2	2	0.307
20	20	0.0251
21	21	0.752
22	22	0.652
23	23	0.22
24	24	0.829
25	25	0.217
26	26	0.353
27	27	0.254
28	28	0.202
29	29	0.391
3	3	0.285
30	30	0.982
31	31	0.314
32	32	0.00281
33	33	0.85
34	34	0.361
35	35	0.00132
36	36	0.118
37	37	0.842
38	38	0.33
39	39	0.977
4	4	0.565
40	40	0.0562
41	41	0.149
42	42	0.0504
43	43	0.85
44	44	0.108
45	45	0.56
46	46	0.0698
47	47	0.982
48	48	0.896
49	49	0.445
5	5	0.373
50	50	0.245
51	51	0.237
52	52	0.897
53	53	0.447
54	54	0.251
55	55	0.944
56	56	0.42
57	57	0.656
58	58	0.283
59	59	0.0327
6	6	0.354
60	60	0.0839
61	61	0.00286
62	62	0.0767
63	63	0.629
64	64	0.68
65	65	0.685
66	66	4.49061e-7
67	67	0.738
68	68	0.0729
69	69	0.36
7	7	0.559
70	70	0.816
71	71	0.464
72	72	0.696
73	73	0.227
74	74	0.765
75	75	0.266
76	76	0.245
77	77	0.23
78	78	0.726
79	79	0.13
8	8	0.396
80	80	0.278
81	81	0.331
82	82	0.378
83	83	0.241
84	84	0.431
85	85	0.34
86	86	0.155
87	87	0.15
88	88	0.71
89	89	0.25
9	9	0.089
90	90	0.698
91	91	0.113
92	92	0.945
93	93	0.589
94	94	0.975
95	95	0.338
96	96	0.997
97	97	0.137
98	98	0.0908
99	99	0.6

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11263

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102219 adrenocortical carcinoma cell
FF:0102424 mesothelioma cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000151 (secretory cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000150 (glandular epithelial cell)
0000163 (endocrine cell)
0000215 (barrier cell)
0000174 (steroid hormone secreting cell)
0000255 (eukaryotic cell)
0000077 (mesothelial cell)
0002097 (cortical cell of adrenal gland)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
305 (carcinoma)
170 (endocrine gland cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002369 (adrenal gland)
0002100 (trunk)
0001851 (cortex)
0001235 (adrenal cortex)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002368 (endocrine gland)
0005177 (trunk region element)
0005172 (abdomen element)
0002530 (gland)
0006858 (adrenal/interrenal gland)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002417 (abdominal segment of trunk)
0000949 (endocrine system)
0000916 (abdomen)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0102219 (adrenocortical carcinoma cell)
0102424 (mesothelioma cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000222 (mesodermal cell)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002369,UBERON:0002100,UBERON:0000483,UBERON:0002530,UBERON:0001851,UBERON:0000926,UBERON:0000479,UBERON:0002346,UBERON:0001235,UBERON:0000064,UBERON:0002368,UBERON:0004121,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0000481,UBERON:0000467,UBERON:0001062,UBERON:0000119,UBERON:0009569,UBERON:0005291,UBERON:0005177,UBERON:0003104,UBERON:0005172,UBERON:0006858,UBERON:0005256,UBERON:0006598,UBERON:0005157,UBERON:0005173,UBERON:0002532,UBERON:0000924,UBERON:0002417,UBERON:0000949,UBERON:0000916,UBERON:0003075,UBERON:0002342,UBERON:0009142,UBERON:0003064,UBERON:0006601,UBERON:0006603,UBERON:0005062,UBERON:0007284
+|DRA_sample_Accession=CAGE@SAMD00005627
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000144,CL:0000548,CL:0000151,CL:0000012,CL:0002321,CL:0000063,CL:0000066,CL:0002371,CL:0000076,CL:0000213,CL:0002078,CL:0000150,CL:0000163,CL:0000215,CL:0000220,CL:0000004,CL:0000174,CL:0000255,CL:0000222,CL:0000077,CL:0002097
+|accession_numbers=CAGE;DRX007936;DRR008808;DRZ000233;DRZ001618;DRZ011583;DRZ012968
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002369,UBERON:0002100,UBERON:0001851,UBERON:0001235,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002368,UBERON:0005177,UBERON:0005172,UBERON:0002530,UBERON:0006858,UBERON:0010317,UBERON:0005173,UBERON:0002417,UBERON:0000949,UBERON:0000916
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000151,CL:0000066,CL:0002371,CL:0000076,CL:0000213,CL:0002078,CL:0000150,CL:0000163,CL:0000215,CL:0000174,CL:0000255,CL:0000077,CL:0002097
 |ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:14566,DOID:0050687,DOID:305,DOID:170
+|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0101120,FF:0102219,FF:0102424
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr7:63505799..63505904,+!p1@ZNF727!1.43!26.00!ZNF727;;chr17:17726907..17726958,-!p2@SREBF1!1.38!137.15!SREBF1;;chr9:96717629..96717644,-!p1@BARX1!1.38!23.11!BARX1;;chr6:10412600..10412637,-!p1@TFAP2A!1.36!36.41!TFAP2A;;chr6:10415276..10415341,-!p2@TFAP2A!1.33!24.85!TFAP2A;;chr19:22193731..22193751,-!p1@ZNF208!1.33!20.61!ZNF208;;chr6:29648890..29648944,-!p1@ZFP57!1.30!18.88!ZFP57;;chr19:9609272..9609297,-!p1@ZNF560!1.28!17.91!ZNF560;;chr5:2751762..2751784,-!p1@IRX2!1.27!17.72!IRX2;;chr8:11561684..11561751,+!p1@GATA4!1.26!17.34!GATA4;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.26!17.14!ZBED1;;chr7:35293685..35293718,-!p1@TBX20!1.20!14.83!TBX20;;chr10:8096772..8096787,+!p2@GATA3!1.19!16.95!GATA3;;chr6:10412392..10412409,-!p4@TFAP2A!1.16!15.41!TFAP2A;;chr10:8096631..8096660,+!p1@GATA3!1.13!15.22!GATA3;;chr6:126240380..126240430,+!p2@NCOA7!1.11!31.01!NCOA7;;chr19:37464453..37464515,+!p4@ZNF568!1.11!11.75!ZNF568;;chr11:32457075..32457095,-!p1@WT1!1.09!11.36!WT1;;chr11:46299199..46299233,+!p1@CREB3L1!1.08!57.02!CREB3L1;;chr19:52956798..52956843,+!p1@ZNF578!1.05!20.80!ZNF578;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!1.03!9.82!ZNF676;;chr15:83953397..83953425,-!p1@BNC1!1.02!10.79!BNC1;;chr4:188916918..188916942,+!p1@ZFP42!1.02!9.44!ZFP42;;chr11:65686732..65686756,+!p2@DRAP1!1.01!39.49!DRAP1;;chr16:86544113..86544145,+!p1@FOXF1!1.00!11.36!FOXF1;;chr7:26191809..26191890,+!p1@NFE2L3!0.98!43.34!NFE2L3;;chr5:178368186..178368238,+!p1@ZNF454!0.92!13.48!ZNF454;;chr11:65667884..65667895,-!p2@FOSL1!0.90!28.32!FOSL1;;chr6:126240356..126240379,+!p7@NCOA7!0.90!8.67!NCOA7;;chr1:25256756..25256774,-!p1@RUNX3!0.89!13.10!RUNX3;;chr11:32457103..32457123,-!p3@WT1!0.88!6.55!WT1;;chr17:7197911..7197964,-!p1@YBX2!0.88!6.55!YBX2;;chr19:45908292..45908374,-!p1@PPP1R13L!0.87!60.10!PPP1R13L;;chr19:53496768..53496799,-!p1@ZNF702P!0.86!10.02!ZNF702P;;chr6:85473156..85473210,-!p2@TBX18!0.86!7.70!TBX18;;chr19:58545369..58545404,+!p2@ZSCAN1!0.86!6.16!ZSCAN1;;chr4:299227..299272,-!p1@ZNF732!0.86!6.16!ZNF732;;chr8:67525473..67525518,-!p1@MYBL1!0.85!14.45!MYBL1;;chr1:203764633..203764674,+!p2@ZC3H11A!0.85!10.21!ZC3H11A;;chr11:65667846..65667868,-!p1@FOSL1!0.84!166.04!FOSL1;;chr15:67418047..67418093,+!p4@SMAD3!0.84!7.70!SMAD3;;chr20:42295713..42295738,+!p2@MYBL2!0.82!35.63!MYBL2;;chr19:53636125..53636178,-!p1@ZNF415!0.82!16.76!ZNF415;;chr5:72744445..72744466,-!p2@FOXD1!0.82!9.63!FOXD1;;chr4:174450089..174450153,-!p2@HAND2!0.82!5.59!HAND2;;chr19:9609247..9609262,-!p2@ZNF560!0.82!5.59!ZNF560;;chr17:46682321..46682362,-!p1@HOXB6!0.82!5.59!HOXB6;;chr19:22605136..22605154,-!p1@ZNF98!0.82!5.59!ZNF98;;chr19:52598958..52599026,-!p1@ZNF841!0.81!56.05!ZNF841;;chr12:54772960..54773015,-!p3@ZNF385A!0.81!28.70!ZNF385A;;chr1:44513995..44514031,+!p1@KLF17!0.81!5.39!KLF17;;chr3:128206762..128206781,-!p2@GATA2!0.80!36.02!GATA2;;chr11:65686802..65686818,+!p6@DRAP1!0.80!9.63!DRAP1;;chr5:134369905..134369972,-!p1@PITX1!0.79!8.28!PITX1;;chr8:67525443..67525459,-!p2@MYBL1!0.79!7.90!MYBL1;;chr6:10415484..10415508,-!p3@TFAP2A!0.79!5.20!TFAP2A;;chr20:2673383..2673441,+!p1@EBF4!0.78!8.28!EBF4;;chr6:126240442..126240459,+!p4@NCOA7!0.78!6.55!NCOA7;;chr7:5111723..5111807,+!p2@RBAK!0.78!5.01!RBAK;;chr8:55370487..55370503,+!p1@SOX17!0.78!5.01!SOX17;;chr9:126774018..126774055,+!p1@LHX2!0.78!5.01!LHX2;;chr19:56879653..56879743,+!p1@ZNF542!0.77!39.68!ZNF542;;chr20:50721803..50721857,-!p2@ZFP64!0.77!8.09!ZFP64;;chr19:38042240..38042309,+!p2@ZNF540!0.77!7.70!ZNF540;;chr12:54447599..54447630,+!p3@HOXC4!0.77!6.16!HOXC4;;chr19:56879534..56879615,+!p3@ZNF542!0.76!7.70!ZNF542;;chr15:67418119..67418162,+!p5@SMAD3!0.76!5.39!SMAD3;;chr6:10412576..10412599,-!p5@TFAP2A!0.76!4.82!TFAP2A;;chr7:27153454..27153469,-!p2@HOXA3!0.76!4.82!HOXA3;;chr12:54378923..54378966,+!p1@HOXC10!0.76!4.82!HOXC10;;chr8:106330656..106330684,+!p1@ZFPM2!0.75!13.10!ZFPM2;;chr19:58629742..58629787,-!p2@ZSCAN18!0.75!4.62!ZSCAN18;;chr3:69811882..69811898,+!p6@MITF!0.73!4.43!MITF;;chr19:58545454..58545498,+!p1@ZSCAN1!0.72!4.24!ZSCAN1;;chr3:141868357..141868393,-!p3@TFDP2!0.71!30.43!TFDP2;;chr20:55204351..55204377,+!p1@TFAP2C!0.71!5.39!TFAP2C;;chr19:53758058..53758088,-!p2@ZNF677!0.70!14.64!ZNF677;;chr19:57352109..57352153,-!p2@ZIM2!0.70!4.05!ZIM2;;chr17:46687959..46688007,-!p2@HOXB7!0.69!5.59!HOXB7;;chr19:2867325..2867348,+!p1@ZNF556!0.69!3.85!ZNF556;;chr20:42295745..42295765,+!p1@MYBL2!0.68!71.85!MYBL2;;chr8:67525524..67525543,-!p3@MYBL1!0.68!6.74!MYBL1;;chr19:45260775..45260838,+!p5@BCL3!0.68!5.20!BCL3;;chr7:19157043..19157088,-!p2@TWIST1!0.67!10.21!TWIST1;;chr11:615570..615721,-!p2@IRF7!0.67!7.90!IRF7;;chr19:22817119..22817145,+!p1@ZNF492!0.67!6.55!ZNF492;;chr19:22966925..22966958,-!p1@ZNF99!0.67!3.66!ZNF99;;chr2:176969228..176969260,+!p1@HOXD11!0.67!3.66!HOXD11;;chr2:63277948..63277974,+!p1@OTX1!0.67!3.66!OTX1;;chr9:124976185..124976212,-!p4@LHX6!0.67!3.66!LHX6;;chr9:96717678..96717689,-!p2@BARX1!0.67!3.66!BARX1;;chr16:30537839..30537929,-!p1@ZNF768!0.65!25.04!ZNF768;;chr5:178157651..178157689,-!p1@ZNF354A!0.65!16.37!ZNF354A;;chr20:55205825..55205847,+!p2@TFAP2C!0.65!3.47!TFAP2C;;chr12:54380404..54380433,+!p3@HOXC10!0.65!3.47!HOXC10;;chr17:46703687..46703740,-!p1@HOXB9!0.65!3.47!HOXB9;;chr8:60031762..60031803,-!p3@TOX!0.64!5.20!TOX;;chr17:17726892..17726903,-!p6@SREBF1!0.64!3.85!SREBF1;;chr19:19729477..19729542,-!p1@PBX4!0.63!7.70!PBX4;;chr20:50808667..50808729,-!p3@ZFP64!0.63!6.93!ZFP64;;chr1:41827095..41827155,+!p1@FOXO6!0.63!4.62!FOXO6;;chr5:142780237..142780261,-!p7@NR3C1!0.63!3.27!NR3C1;;chr17:17740287..17740307,-!p1@SREBF1!0.62!99.97!SREBF1;;chr7:27135591..27135658,-!p1@HOXA1!0.62!6.74!HOXA1;;chr10:8095593..8095625,+!p3@GATA3!0.62!3.85!GATA3;;chr5:178286925..178287007,+!p1@ZNF354B!0.61!20.61!ZNF354B;;chr16:4366021..4366045,+!p@chr16:4366021..4366045,+!0.61!17.34!GLIS2;;chr19:22235279..22235301,+!p1@ZNF257!0.61!6.36!ZNF257;;chr7:19157248..19157268,-!p1@TWIST1!0.60!9.44!TWIST1;;chr9:114287433..114287513,+!p1@ZNF483!0.60!8.86!ZNF483;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.60!7.13!ZNF395;;chr11:65686776..65686787,+!p9@DRAP1!0.60!3.66!DRAP1;;chr17:46622229..46622257,-!p6@HOXB2!0.59!3.47!HOXB2;;chr17:46622440..46622477,-!p5@HOXB2!0.59!3.27!HOXB2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.59!2.89!PEG3;;chr18:53068911..53068935,-!p4@TCF4!0.58!3.27!TCF4;;chr17:70117153..70117174,+!p1@SOX9!0.57!34.67!SOX9;;chr3:150126759..150126784,+!p2@TSC22D2!0.57!14.83!TSC22D2;;chr11:65430554..65430579,-!p3@RELA!0.57!8.09!RELA;;chr2:46524474..46524491,+!p4@EPAS1!0.57!7.51!EPAS1;;chr3:5021268..5021282,+!p4@BHLHE40!0.57!6.36!BHLHE40;;chr10:8100691..8100732,+!p5@GATA3!0.57!2.70!GATA3;;chr12:54393880..54393962,+!p1@HOXC9!0.57!2.70!HOXC9;;chr21:38071430..38071456,+!p1@SIM2!0.57!2.70!SIM2;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.57!2.70!SEBOX;;chr5:142780189..142780223,-!p6@NR3C1!0.57!2.70!NR3C1;;chr9:14314131..14314147,-!p2@NFIB!0.56!18.11!NFIB;;chr19:38146320..38146401,-!p1@ZFP30!0.56!17.53!ZFP30;;chr16:3493446..3493510,-!p1@ZNF597!0.56!14.25!ZNF597;;chr3:12329358..12329393,+!p3@PPARG!0.56!7.51!PPARG;;chr11:8102749..8102769,+!p2@TUB!0.56!5.78!TUB;;chr19:37464063..37464127,+!p2@ZNF568!0.56!3.66!ZNF568;;chr22:22863052..22863133,-!p1@ZNF280B!0.55!7.90!ZNF280B;;chr2:200323414..200323455,-!p1@SATB2!0.55!6.36!SATB2;;chr3:129158854..129158883,-!p3@MBD4!0.54!15.22!MBD4;;chr1:33004996..33005017,+!p3@ZBTB8A!0.54!3.66!ZBTB8A;;chr19:22398533..22398542,-!p@chr19:22398533..22398542,-!0.54!2.50!ZNF676;;chr12:54380036..54380091,+!p4@HOXC10!0.54!2.50!HOXC10;;chr12:54447637..54447659,+!p4@HOXC4!0.54!2.50!HOXC4;;chr5:2751785..2751808,-!p2@IRX2!0.54!2.50!IRX2;;chr2:238600789..238600925,+!p1@LRRFIP1!0.53!61.45!LRRFIP1;;chr12:124873357..124873401,-!p1@NCOR2!0.53!35.63!NCOR2;;chr4:1873011..1873063,+!p2@WHSC1!0.52!9.63!WHSC1;;chr19:53496806..53496848,-!p2@ZNF702P!0.52!3.85!ZNF702P;;chr16:54320158..54320200,-!p5@IRX3!0.52!3.66!IRX3;;chr9:110251836..110251887,-!p4@KLF4!0.52!3.27!KLF4;;chr5:134369879..134369898,-!p2@PITX1!0.52!2.31!PITX1;;chr7:35293665..35293680,-!p2@TBX20!0.52!2.31!TBX20;;chr19:56879625..56879636,+!p5@ZNF542!0.52!2.31!ZNF542;;chr11:65668011..65668020,-!p3@FOSL1!0.52!2.31!FOSL1;;chr12:54447219..54447237,+!p6@HOXC4!0.52!2.31!HOXC4;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.52!2.31!SEBOX;;chr1:26496382..26496457,+!p1@ZNF593!0.51!176.63!ZNF593;;chr5:72744594..72744609,-!p1@FOXD1!0.51!12.91!FOXD1;;chr14:61116183..61116208,-!p1@SIX1!0.51!10.59!SIX1;;chr19:44331493..44331552,+!p1@ZNF283!0.51!10.02!ZNF283;;chr8:106330696..106330719,+!p2@ZFPM2!0.51!3.08!ZFPM2;;chrX:128657457..128657475,-!p1@SMARCA1!0.50!32.94!SMARCA1;;chr15:67357924..67357952,+!p2@SMAD3!0.50!18.68!SMAD3;;chr2:46524897..46524911,+!p2@EPAS1!0.50!7.51!EPAS1;;chr5:150284532..150284549,-!p1@ZNF300!0.50!5.39!ZNF300;;chr17:46688334..46688385,-!p1@HOXB7!0.50!3.47!HOXB7;;chr6:44233252..44233296,-!p1@NFKBIE!0.49!27.16!NFKBIE;;chr1:935467..935484,-!p1@HES4!0.49!11.75!HES4;;chr19:12203100..12203132,+!p1@ZNF788!0.49!5.01!ZNF788;;chr5:174151553..174151610,+!p1@MSX2!0.49!4.05!MSX2;;chr8:28243785..28243799,-!p6@ZNF395!0.49!2.70!ZNF395;;chr6:10412477..10412490,-!p10@TFAP2A!0.49!2.12!TFAP2A;;chr6:10415263..10415274,-!p8@TFAP2A!0.49!2.12!TFAP2A;;chr19:48773337..48773339,+!p2@ZNF114!0.49!2.12!ZNF114;;chr10:64134045..64134083,+!p3@ZNF365!0.49!2.12!ZNF365;;chr3:12329339..12329356,+!p5@PPARG!0.49!2.12!PPARG;;chr4:174451370..174451387,-!p1@HAND2!0.49!2.12!HAND2;;chr8:37553292..37553317,+!p1@ZNF703!0.48!64.53!ZNF703;;chr19:53935221..53935258,+!p1@ZNF761!0.48!27.54!ZNF761;;chr7:149470641..149470694,-!p1@ZNF467!0.48!11.94!ZNF467;;chr3:44771092..44771160,+!p1@ZNF501!0.48!10.59!ZNF501;;chr3:5021191..5021202,+!p3@BHLHE40!0.48!6.74!BHLHE40;;chr5:178157700..178157734,-!p3@ZNF354A!0.48!5.01!ZNF354A;;chr6:27356527..27356557,+!p2@ZNF391!0.48!3.08!ZNF391;;chr4:4291861..4291913,-!p1@LYAR!0.47!61.45!LYAR;;chr7:139762641..139762768,-!p1@PARP12!0.47!36.60!PARP12;;chr7:137686824..137686865,-!p2@CREB3L2!0.47!33.52!CREB3L2;;chr5:56247935..56247959,-!p1@MIER3!0.47!13.87!MIER3;;chr19:53360870..53360873,-!p1@ZNF468!0.47!9.25!ZNF468;;chr15:37390850..37390909,-!p3@MEIS2!0.47!4.62!MEIS2;;chr11:46299539..46299620,+!p2@CREB3L1!0.47!3.85!CREB3L1;;chr8:60031682..60031710,-!p2@TOX!0.47!3.66!TOX;;chr17:46655704..46655718,-!p2@HOXB4!0.47!3.27!HOXB4;;chr6:126240463..126240489,+!p6@NCOA7!0.47!2.31!NCOA7;;chr7:1577899..1577943,+!p3@MAFK!0.47!1.93!MAFK;;chr7:27170359..27170381,-!p1@HOXA4!0.47!1.93!HOXA4;;chr8:106331769..106331772,+!p8@ZFPM2!0.47!1.93!ZFPM2;;chr11:44331576..44331650,-!p1@ALX4!0.47!1.93!ALX4;;chr22:22874610..22874616,-!p1@ZNF280A!0.47!1.93!ZNF280A;;chr17:46655578..46655589,-!p4@HOXB4!0.47!1.93!HOXB4;;chr17:46703212..46703238,-!p2@HOXB9!0.47!1.93!HOXB9;;chr19:12624655..12624680,-!p4@ZNF709!0.47!1.93!ZNF709;;chr19:22605097..22605121,-!p2@ZNF98!0.47!1.93!ZNF98;;chr12:27485785..27485816,+!p1@ARNTL2!0.46!17.91!ARNTL2;;chr12:27485823..27485868,+!p2@ARNTL2!0.46!10.02!ARNTL2;;chr10:105110890..105110914,-!p2@PCGF6!0.46!8.86!PCGF6;;chr6:12008986..12009016,+!p3@HIVEP1!0.46!7.51!HIVEP1;;chr5:178322893..178322931,+!p1@ZFP2!0.46!3.08!ZFP2;;chr20:50179368..50179392,-!p2@NFATC2!0.46!2.70!NFATC2;;chr17:40540484..40540537,-!p2@STAT3!0.45!24.27!STAT3;;chr11:65687362..65687436,+!p3@DRAP1!0.45!11.17!DRAP1;;chr17:56065729..56065781,-!p2@VEZF1!0.45!10.40!VEZF1;;chr4:4861385..4861398,+!p1@MSX1!0.45!6.93!MSX1;;chr19:52674853..52674892,-!p2@ZNF836!0.45!6.16!ZNF836;;chr15:67357992..67358009,+!p3@SMAD3!0.45!5.59!SMAD3;;chr11:128392309..128392350,-!p3@ETS1!0.45!5.39!ETS1;;chr12:3068466..3068495,+!p3@TEAD4!0.45!4.82!TEAD4;;chr8:23540441..23540466,-!p1@NKX3-1!0.45!4.43!NKX3-1;;chr8:60031809..60031835,-!p4@TOX!0.45!2.50!TOX;;chr3:141087339..141087387,+!p2@ZBTB38!0.44!25.23!ZBTB38;;chr17:16472486..16472533,-!p1@ZNF287!0.44!11.75!ZNF287;;chr4:492909..492968,-!p2@ZNF721!0.44!10.59!ZNF721;;chr3:185826764..185826803,-!p2@ETV5!0.44!8.86!ETV5;;chr5:178487354..178487408,+!p1@ZNF354C!0.44!6.74!ZNF354C;;chr5:178157609..178157650,-!p2@ZNF354A!0.44!6.36!ZNF354A;;chr3:44754126..44754171,+!p1@ZNF502!0.44!5.59!ZNF502;;chr1:935398..935465,-!p2@HES4!0.44!4.43!HES4;;chr3:12330560..12330579,+!p1@PPARG!0.44!2.12!PPARG;;chr2:176994408..176994492,+!p1@HOXD8!0.44!1.73!HOXD8;;chr2:45168997..45169020,+!p4@SIX3!0.44!1.73!SIX3;;chr3:69811858..69811881,+!p5@MITF!0.44!1.73!MITF;;chr9:124976328..124976372,-!p2@LHX6!0.44!1.73!LHX6;;chr16:3493528..3493539,-!p2@ZNF597!0.44!1.73!ZNF597;;chr17:48046543..48046575,+!p2@DLX4!0.44!1.73!DLX4;;chr19:2867298..2867317,+!p2@ZNF556!0.44!1.73!ZNF556;;chr9:126773880..126773895,+!p2@LHX2!0.44!1.73!LHX2;;chr19:9473676..9473712,+!p2@ZNF177,p2@ZNF559-ZNF177!0.44!1.73!ZNF177;;chr12:54332608..54332636,+!p1@HOXC13!0.44!1.73!HOXC13;;chr12:54378864..54378884,+!p6@HOXC10!0.44!1.73!HOXC10;;chr9:35732647..35732678,+!p2@CREB3!0.43!12.91!CREB3;;chr15:37392724..37392757,-!p1@MEIS2!0.43!10.59!MEIS2;;chr19:53289995..53290050,-!p1@ZNF600!0.43!9.44!ZNF600;;chr19:52391147..52391218,-!p1@ZNF577!0.43!6.93!ZNF577;;chr16:4365715..4365746,+!p@chr16:4365715..4365746,+!0.43!2.50!GLIS2;;chr15:37392094..37392116,-!p6@MEIS2!0.43!2.31!MEIS2;;chr17:41623075..41623101,-!p9@ETV4!0.43!2.12!ETV4;;chr17:46622205..46622218,-!p3@HOXB2!0.43!2.12!HOXB2;;chr5:16465902..16465917,-!p1@ZNF622!0.42!56.82!ZNF622;;chr6:126112074..126112144,+!p1@NCOA7!0.42!31.78!NCOA7;;chr19:52901094..52901134,+!p1@ZNF528!0.42!15.41!ZNF528;;chr20:25677465..25677497,-!p1@ZNF337!0.42!14.25!ZNF337;;chr19:58694421..58694485,+!p1@ZNF274!0.42!11.94!ZNF274;;chr19:36909528..36909581,-!p1@ZFP82!0.42!10.40!ZFP82;;chr19:45252008..45252024,+!p2@BCL3!0.42!7.32!BCL3;;chr4:10458982..10459007,-!p2@ZNF518B!0.42!7.13!ZNF518B;;chr1:40915725..40915808,+!p1@ZNF643!0.42!6.36!ZNF643;;chr19:53662295..53662319,-!p1@ZNF347!0.42!5.39!ZNF347;;chr18:51750928..51750942,-!p4@MBD2!0.42!5.20!MBD2;;chr19:33864571..33864596,+!p2@CEBPG!0.42!5.20!CEBPG;;chr19:35417798..35417842,+!p1@ZNF30!0.42!3.27!ZNF30;;chr11:707063..707088,-!p4@DEAF1!0.42!2.31!DEAF1;;chr19:52490043..52490113,-!p1@ZNF350!0.41!17.72!ZNF350;;chr5:43121711..43121753,+!p2@ZNF131!0.41!6.16!ZNF131;;chrX:153363188..153363203,-!p2@MECP2!0.41!4.82!MECP2;;chr8:72756063..72756125,-!p1@MSC!0.41!4.05!MSC;;chr8:28243813..28243839,-!p4@ZNF395!0.41!3.47!ZNF395;;chr3:157823517..157823562,-!p1@SHOX2!0.41!1.73!SHOX2;;chr4:38665769..38665801,+!p2@KLF3!0.40!20.23!KLF3;;chr3:44690211..44690267,+!p1@ZNF35!0.40!19.26!ZNF35;;chr8:145980808..145980922,-!p1@ZNF251!0.40!16.18!ZNF251;;chr19:50529247..50529296,+!p1@ZNF473!0.40!14.25!ZNF473;;chr17:7382935..7382961,-!p2@ZBTB4!0.40!13.29!ZBTB4;;chr19:21579908..21579949,+!p1@ZNF493!0.40!13.29!ZNF493;;chr12:80084303..80084332,-!p1@PAWR!0.40!12.91!PAWR;;chr19:56904880..56904919,-!p1@ZNF582!0.40!4.82!ZNF582;;chr12:133706820..133706881,-!p1@ZNF891!0.40!4.05!ZNF891;;chr1:151032782..151032801,+!p4@MLLT11!0.40!3.85!MLLT11;;chr5:72744562..72744573,-!p3@FOXD1!0.40!2.12!FOXD1;;chr6:28321909..28321965,-!p3@ZNF323!0.40!1.54!ZNF323;;chr6:28321971..28321995,-!p1@ZNF323!0.40!1.54!ZNF323;;chr9:124976154..124976177,-!p5@LHX6!0.40!1.54!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+|ffid_belonging_in_development=CL:0000222
 |fonse_cell_line=FF:0101120,FF:0102424
 |fonse_cell_line_closure=FF:0101120,FF:0102424
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mesothelioma%2520cell%2520line%253aACC-MESO-1.CNhs11263.10493-107B7.hg38.nobarcode.ctss.bed.gz
 |id=FF:10493-107B7
-|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0102219;;FF:0102424
+|is_a=EFO:0002091;;FF:0000210;;FF:0102219;;FF:0102424
+|is_obsolete=
+|library_id=CNhs11263
+|library_id_phase_based=2:CNhs11263
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10493
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10493
 |name=mesothelioma cell line:ACC-MESO-1
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11263,LSID758,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
+|repeat_enrich_byfamily=0,0,0,0,0.070762458673173,0,0,-0.0187931127400399,0,-0.233492986588012,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0768209840030836,0,0,0,0,0,-0.0214558699227134,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0.370760756091885,0,-0.046865553683914,0,0,0,0,0,0,0,0,0.564850638899823,0,0,0,0,0,0,0,-0.0969923612426051,0,0,-0.0208416008677529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0947472343308434,0,0,0,0.0409272970645402,0.193747612335365,0.038251013172672,0,0.038251013172672,0,-0.0215333248923623,-0.100226187628223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0256111352492879,0,0,0,-0.0520433133912705,-0.177702714891027,0,0,0,0,0,0
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 |rna_box=107
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=50.6495
 |sample_age=61
+|sample_category=cell lines
 |sample_cell_catalog=RCB2292
 |sample_cell_line=ACC-MESO-1
@@ Line 69: / Line 91: @@
 |sample_ethnicity=J
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.60287041739389e-264!GO:0043226;organelle;5.70312305953798e-212!GO:0043229;intracellular organelle;2.95062160498793e-211!GO:0043231;intracellular membrane-bound organelle;2.09474834848467e-209!GO:0043227;membrane-bound organelle;2.89555925556113e-209!GO:0005737;cytoplasm;2.78266680788966e-189!GO:0044422;organelle part;1.73420111064583e-143!GO:0044446;intracellular organelle part;7.38607961123322e-142!GO:0044444;cytoplasmic part;8.44485846901164e-132!GO:0032991;macromolecular complex;1.31582269592478e-95!GO:0044238;primary metabolic process;2.41805680483594e-92!GO:0005634;nucleus;9.16430994915334e-91!GO:0043170;macromolecule metabolic process;2.79358094072518e-90!GO:0044237;cellular metabolic process;6.21298221458273e-90!GO:0030529;ribonucleoprotein complex;1.81651539456445e-87!GO:0003723;RNA binding;7.05999245796392e-78!GO:0044428;nuclear part;1.42051792911262e-75!GO:0043233;organelle lumen;1.38768038614943e-71!GO:0031974;membrane-enclosed lumen;1.38768038614943e-71!GO:0005515;protein binding;4.88950023762358e-70!GO:0005739;mitochondrion;6.21185831083031e-61!GO:0043283;biopolymer metabolic process;3.37874141843986e-56!GO:0016043;cellular component organization and biogenesis;2.33558585740769e-53!GO:0031090;organelle membrane;2.43554822697127e-51!GO:0006412;translation;5.76150484080308e-51!GO:0010467;gene expression;1.82434620518842e-50!GO:0006396;RNA processing;2.07375736489485e-50!GO:0019538;protein metabolic process;1.05068028975996e-49!GO:0005840;ribosome;1.48859565507817e-49!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.97611508133182e-48!GO:0043234;protein complex;2.35621509179491e-46!GO:0031981;nuclear lumen;1.76454887334483e-45!GO:0044260;cellular macromolecule metabolic process;1.69845600871317e-44!GO:0044267;cellular protein metabolic process;3.30459925542583e-44!GO:0003735;structural constituent of ribosome;7.00603077793477e-44!GO:0033036;macromolecule localization;8.30994839871057e-44!GO:0015031;protein transport;2.626918732227e-43!GO:0045184;establishment of protein localization;2.41943957761329e-40!GO:0008104;protein localization;9.05467684944925e-40!GO:0044429;mitochondrial part;2.02010920261428e-39!GO:0016071;mRNA metabolic process;1.03133057189178e-38!GO:0005829;cytosol;5.43108709089425e-38!GO:0009059;macromolecule biosynthetic process;5.70903202315303e-38!GO:0031967;organelle envelope;8.89646635883461e-38!GO:0033279;ribosomal subunit;1.84141847183831e-37!GO:0031975;envelope;2.01210751732797e-37!GO:0009058;biosynthetic process;1.6222713753106e-36!GO:0044249;cellular biosynthetic process;4.33800762877558e-36!GO:0008380;RNA splicing;9.41186869091207e-36!GO:0043228;non-membrane-bound organelle;2.92686978984404e-35!GO:0043232;intracellular non-membrane-bound organelle;2.92686978984404e-35!GO:0046907;intracellular transport;5.07035034911921e-35!GO:0003676;nucleic acid binding;3.48242750333575e-34!GO:0006996;organelle organization and biogenesis;6.84343813213286e-34!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.06692172902683e-33!GO:0006397;mRNA processing;9.28065608622444e-33!GO:0065003;macromolecular complex assembly;8.25876507069247e-31!GO:0022607;cellular component assembly;3.83769220085441e-28!GO:0006886;intracellular protein transport;9.98017822002826e-28!GO:0005681;spliceosome;1.58183414150337e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.38336451370373e-26!GO:0000166;nucleotide binding;2.75434375944243e-26!GO:0005654;nucleoplasm;6.5625229990306e-26!GO:0005740;mitochondrial envelope;1.33669374305977e-25!GO:0051649;establishment of cellular localization;2.13945086904224e-25!GO:0016070;RNA metabolic process;2.53909634025296e-25!GO:0051641;cellular localization;4.07866030284886e-25!GO:0006259;DNA metabolic process;9.44820181032622e-25!GO:0017111;nucleoside-triphosphatase activity;3.33932367028264e-24!GO:0016462;pyrophosphatase activity;4.09749630915319e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.18210828806044e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;9.52467298001551e-24!GO:0031966;mitochondrial membrane;9.76777625833164e-24!GO:0012505;endomembrane system;1.7712877724739e-23!GO:0005730;nucleolus;1.40878810369323e-22!GO:0019866;organelle inner membrane;2.13896171101296e-22!GO:0044451;nucleoplasm part;1.12936162525356e-21!GO:0044445;cytosolic part;1.3234656739805e-21!GO:0005743;mitochondrial inner membrane;3.58767692584801e-21!GO:0006119;oxidative phosphorylation;3.19946110930637e-20!GO:0006512;ubiquitin cycle;7.30374058097265e-20!GO:0016874;ligase activity;9.20899284305277e-20!GO:0006457;protein folding;1.37093689473897e-19!GO:0022618;protein-RNA complex assembly;1.69325050904352e-19!GO:0015934;large ribosomal subunit;1.93901131552119e-19!GO:0032553;ribonucleotide binding;2.1055308647791e-19!GO:0032555;purine ribonucleotide binding;2.1055308647791e-19!GO:0007049;cell cycle;2.61298282849876e-19!GO:0005783;endoplasmic reticulum;4.76213313058963e-19!GO:0015935;small ribosomal subunit;4.76213313058963e-19!GO:0051603;proteolysis involved in cellular protein catabolic process;2.36349042164927e-18!GO:0044265;cellular macromolecule catabolic process;2.94721876392866e-18!GO:0017076;purine nucleotide binding;3.31938681727763e-18!GO:0019941;modification-dependent protein catabolic process;3.65806744683559e-18!GO:0043632;modification-dependent macromolecule catabolic process;3.65806744683559e-18!GO:0044257;cellular protein catabolic process;6.37845519029819e-18!GO:0006511;ubiquitin-dependent protein catabolic process;9.89508284002891e-18!GO:0043285;biopolymer catabolic process;1.11258222093843e-17!GO:0044455;mitochondrial membrane part;1.30807466910026e-17!GO:0005794;Golgi apparatus;3.50459374846956e-17!GO:0048770;pigment granule;9.80582806457917e-17!GO:0042470;melanosome;9.80582806457917e-17!GO:0008134;transcription factor binding;1.31977624067703e-16!GO:0008135;translation factor activity, nucleic acid binding;2.50972885766372e-16!GO:0009057;macromolecule catabolic process;5.68589656466496e-16!GO:0000502;proteasome complex (sensu Eukaryota);7.71727244273571e-16!GO:0030163;protein catabolic process;8.0849582016839e-16!GO:0031980;mitochondrial lumen;9.36088046679189e-16!GO:0005759;mitochondrial matrix;9.36088046679189e-16!GO:0005524;ATP binding;1.09352484859921e-15!GO:0044432;endoplasmic reticulum part;2.28228640378066e-15!GO:0032559;adenyl ribonucleotide binding;3.06337866203172e-15!GO:0016192;vesicle-mediated transport;3.50324917281313e-15!GO:0048193;Golgi vesicle transport;4.37117323996221e-15!GO:0042254;ribosome biogenesis and assembly;5.27864512193468e-15!GO:0051082;unfolded protein binding;7.50121710827756e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.51676062211364e-15!GO:0043412;biopolymer modification;9.67191461161433e-15!GO:0005761;mitochondrial ribosome;1.12371916022515e-14!GO:0000313;organellar ribosome;1.12371916022515e-14!GO:0022402;cell cycle process;5.41750741527164e-14!GO:0030554;adenyl nucleotide binding;6.06198348510652e-14!GO:0006974;response to DNA damage stimulus;6.38057353340101e-14!GO:0005746;mitochondrial respiratory chain;8.61013135245388e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.68256593031899e-14!GO:0000375;RNA splicing, via transesterification reactions;9.68256593031899e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.68256593031899e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.60296470062552e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.60913956529732e-13!GO:0003954;NADH dehydrogenase activity;1.60913956529732e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.60913956529732e-13!GO:0006605;protein targeting;3.10586885450806e-13!GO:0016887;ATPase activity;3.77312307700698e-13!GO:0005635;nuclear envelope;4.26463887243989e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.03308820951295e-13!GO:0050794;regulation of cellular process;9.51725983595879e-13!GO:0003743;translation initiation factor activity;1.38933756307674e-12!GO:0006464;protein modification process;1.46136228299343e-12!GO:0012501;programmed cell death;1.61915380591703e-12!GO:0044248;cellular catabolic process;2.14536345875315e-12!GO:0042623;ATPase activity, coupled;2.22279091723018e-12!GO:0006915;apoptosis;2.50525041324018e-12!GO:0000278;mitotic cell cycle;3.29564164988813e-12!GO:0031965;nuclear membrane;4.38701064352292e-12!GO:0051186;cofactor metabolic process;5.24629661213646e-12!GO:0006413;translational initiation;5.99607100066791e-12!GO:0016604;nuclear body;7.09217899290005e-12!GO:0042775;organelle ATP synthesis coupled electron transport;9.25911395635706e-12!GO:0042773;ATP synthesis coupled electron transport;9.25911395635706e-12!GO:0003712;transcription cofactor activity;1.33064295983164e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.57325975147265e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.65099828404112e-11!GO:0045271;respiratory chain complex I;1.65099828404112e-11!GO:0005747;mitochondrial respiratory chain complex I;1.65099828404112e-11!GO:0005793;ER-Golgi intermediate compartment;1.79954679549485e-11!GO:0005694;chromosome;1.81286190380251e-11!GO:0008219;cell death;2.52678920485615e-11!GO:0016265;death;2.52678920485615e-11!GO:0008639;small protein conjugating enzyme activity;2.84503011861118e-11!GO:0004386;helicase activity;2.92361168371442e-11!GO:0006281;DNA repair;3.69368865392172e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.9474412302367e-11!GO:0006446;regulation of translational initiation;4.2564038817317e-11!GO:0005789;endoplasmic reticulum membrane;5.89877931384504e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.55397580762876e-11!GO:0004842;ubiquitin-protein ligase activity;6.93022378825993e-11!GO:0043687;post-translational protein modification;9.25576232000001e-11!GO:0044453;nuclear membrane part;1.09410531015606e-10!GO:0006399;tRNA metabolic process;1.3291904365386e-10!GO:0019787;small conjugating protein ligase activity;1.33336643370011e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.41889313962815e-10!GO:0051276;chromosome organization and biogenesis;2.37592045679784e-10!GO:0006366;transcription from RNA polymerase II promoter;4.66842537872526e-10!GO:0016881;acid-amino acid ligase activity;5.33279113209573e-10!GO:0051301;cell division;6.37443483683424e-10!GO:0008026;ATP-dependent helicase activity;7.30791929066247e-10!GO:0006913;nucleocytoplasmic transport;8.17342105172306e-10!GO:0005768;endosome;8.28954806783748e-10!GO:0006260;DNA replication;9.18473969671001e-10!GO:0006364;rRNA processing;1.02316543104274e-09!GO:0016607;nuclear speck;1.2018582237951e-09!GO:0009055;electron carrier activity;1.35251013006222e-09!GO:0051169;nuclear transport;1.5070460082171e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.54165160366821e-09!GO:0016072;rRNA metabolic process;1.83008412387749e-09!GO:0044427;chromosomal part;2.3551648310132e-09!GO:0005643;nuclear pore;2.58182245579486e-09!GO:0003924;GTPase activity;2.70504912074692e-09!GO:0022403;cell cycle phase;4.53978896388691e-09!GO:0006461;protein complex assembly;4.62197975000313e-09!GO:0006732;coenzyme metabolic process;4.88823748652184e-09!GO:0050789;regulation of biological process;5.09403414413195e-09!GO:0009259;ribonucleotide metabolic process;5.30153094859916e-09!GO:0000087;M phase of mitotic cell cycle;5.60864718923089e-09!GO:0007067;mitosis;7.47648786275765e-09!GO:0009719;response to endogenous stimulus;8.19487603773097e-09!GO:0006163;purine nucleotide metabolic process;8.28803827662397e-09!GO:0006403;RNA localization;8.95450997430387e-09!GO:0050657;nucleic acid transport;9.54459597118065e-09!GO:0051236;establishment of RNA localization;9.54459597118065e-09!GO:0050658;RNA transport;9.54459597118065e-09!GO:0065002;intracellular protein transport across a membrane;1.24694418082715e-08!GO:0008565;protein transporter activity;1.40955488719129e-08!GO:0006164;purine nucleotide biosynthetic process;2.05583845365426e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.11472476110336e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.1599102463766e-08!GO:0009150;purine ribonucleotide metabolic process;2.34424959263904e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;2.53224134551817e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.67881549726223e-08!GO:0004812;aminoacyl-tRNA ligase activity;2.67881549726223e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.67881549726223e-08!GO:0009260;ribonucleotide biosynthetic process;3.15388357508314e-08!GO:0043067;regulation of programmed cell death;3.18912047570351e-08!GO:0042981;regulation of apoptosis;3.72476384119933e-08!GO:0046930;pore complex;3.91852168061285e-08!GO:0051246;regulation of protein metabolic process;4.32804497236704e-08!GO:0006888;ER to Golgi vesicle-mediated transport;4.3846096177692e-08!GO:0043038;amino acid activation;4.4446716466037e-08!GO:0006418;tRNA aminoacylation for protein translation;4.4446716466037e-08!GO:0043039;tRNA aminoacylation;4.4446716466037e-08!GO:0007005;mitochondrion organization and biogenesis;5.11495179274543e-08!GO:0009152;purine ribonucleotide biosynthetic process;5.50289935447646e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.81348379046536e-08!GO:0019222;regulation of metabolic process;6.34028830875172e-08!GO:0006323;DNA packaging;7.15050102720283e-08!GO:0015986;ATP synthesis coupled proton transport;7.52501242159586e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.52501242159586e-08!GO:0043069;negative regulation of programmed cell death;1.01497503154604e-07!GO:0009141;nucleoside triphosphate metabolic process;1.0165823980871e-07!GO:0044431;Golgi apparatus part;1.08089648372194e-07!GO:0006916;anti-apoptosis;1.08270657743241e-07!GO:0048523;negative regulation of cellular process;1.15807063882495e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.15807063882495e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.15807063882495e-07!GO:0009144;purine nucleoside triphosphate metabolic process;1.15807063882495e-07!GO:0051726;regulation of cell cycle;1.38459615035889e-07!GO:0019829;cation-transporting ATPase activity;1.44785807314155e-07!GO:0000074;regulation of progression through cell cycle;1.5099665961954e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.56582391017086e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.56582391017086e-07!GO:0032446;protein modification by small protein conjugation;1.5850733859303e-07!GO:0043066;negative regulation of apoptosis;1.80963116048703e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.82046566846976e-07!GO:0015630;microtubule cytoskeleton;2.10344891186851e-07!GO:0016567;protein ubiquitination;2.11638884408897e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.8678857512221e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.21981403820598e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.21981403820598e-07!GO:0000279;M phase;3.47878890167919e-07!GO:0046034;ATP metabolic process;3.85328454133864e-07!GO:0017038;protein import;4.00713241195608e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.66823296894392e-07!GO:0000245;spliceosome assembly;4.78558265720733e-07!GO:0009056;catabolic process;4.85332862946023e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.85332862946023e-07!GO:0005839;proteasome core complex (sensu Eukaryota);5.5413351491674e-07!GO:0051028;mRNA transport;6.0269330489743e-07!GO:0030120;vesicle coat;6.07765358607495e-07!GO:0030662;coated vesicle membrane;6.07765358607495e-07!GO:0065004;protein-DNA complex assembly;7.19028392880416e-07!GO:0015078;hydrogen ion transmembrane transporter activity;7.67004193253905e-07!GO:0031988;membrane-bound vesicle;7.90179180491063e-07!GO:0006754;ATP biosynthetic process;8.57213344007403e-07!GO:0006753;nucleoside phosphate metabolic process;8.57213344007403e-07!GO:0016023;cytoplasmic membrane-bound vesicle;9.04339485938203e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.08139133553125e-06!GO:0048475;coated membrane;1.4202091435557e-06!GO:0030117;membrane coat;1.4202091435557e-06!GO:0005525;GTP binding;1.52457019353017e-06!GO:0005770;late endosome;1.84621181604647e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.85686343556212e-06!GO:0051188;cofactor biosynthetic process;1.90030932905443e-06!GO:0005788;endoplasmic reticulum lumen;1.9509166632472e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.04235015889236e-06!GO:0048519;negative regulation of biological process;2.39196564712314e-06!GO:0045259;proton-transporting ATP synthase complex;2.70302020701588e-06!GO:0005813;centrosome;2.73609198415356e-06!GO:0016779;nucleotidyltransferase activity;3.02678997409231e-06!GO:0031982;vesicle;3.07517864195634e-06!GO:0016568;chromatin modification;3.16704005590977e-06!GO:0004298;threonine endopeptidase activity;3.68818622611732e-06!GO:0043623;cellular protein complex assembly;3.83720318226941e-06!GO:0016563;transcription activator activity;4.32593397507102e-06!GO:0051789;response to protein stimulus;4.61646534893643e-06!GO:0006986;response to unfolded protein;4.61646534893643e-06!GO:0009060;aerobic respiration;4.75879984709045e-06!GO:0016740;transferase activity;4.97639922463705e-06!GO:0031410;cytoplasmic vesicle;5.29139090454134e-06!GO:0000139;Golgi membrane;5.69988169096787e-06!GO:0000785;chromatin;5.87627543729978e-06!GO:0005667;transcription factor complex;7.10034804657195e-06!GO:0044440;endosomal part;7.30371261097891e-06!GO:0010008;endosome membrane;7.30371261097891e-06!GO:0006333;chromatin assembly or disassembly;7.77655999701412e-06!GO:0016787;hydrolase activity;7.9832514537584e-06!GO:0031252;leading edge;9.34148239269458e-06!GO:0000151;ubiquitin ligase complex;9.92263675373089e-06!GO:0006613;cotranslational protein targeting to membrane;1.06759897734144e-05!GO:0005815;microtubule organizing center;1.11055263882785e-05!GO:0003713;transcription coactivator activity;1.24390513197209e-05!GO:0031323;regulation of cellular metabolic process;1.37847912088602e-05!GO:0003714;transcription corepressor activity;1.37847912088602e-05!GO:0003724;RNA helicase activity;1.49732347546247e-05!GO:0009117;nucleotide metabolic process;1.56815528374576e-05!GO:0043566;structure-specific DNA binding;1.81998620453063e-05!GO:0007010;cytoskeleton organization and biogenesis;2.08911293993659e-05!GO:0032561;guanyl ribonucleotide binding;2.3766260843101e-05!GO:0019001;guanyl nucleotide binding;2.3766260843101e-05!GO:0045333;cellular respiration;2.9151512538509e-05!GO:0009108;coenzyme biosynthetic process;2.93129347247492e-05!GO:0006793;phosphorus metabolic process;2.96291146864586e-05!GO:0006796;phosphate metabolic process;2.96291146864586e-05!GO:0005762;mitochondrial large ribosomal subunit;3.07018663324866e-05!GO:0000315;organellar large ribosomal subunit;3.07018663324866e-05!GO:0006752;group transfer coenzyme metabolic process;3.2187299430359e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.06054860142117e-05!GO:0048471;perinuclear region of cytoplasm;4.13981955411616e-05!GO:0016564;transcription repressor activity;4.2058923056754e-05!GO:0006350;transcription;4.38354503089118e-05!GO:0000314;organellar small ribosomal subunit;4.38354503089118e-05!GO:0005763;mitochondrial small ribosomal subunit;4.38354503089118e-05!GO:0003697;single-stranded DNA binding;4.91949746305321e-05!GO:0065007;biological regulation;4.99959926288637e-05!GO:0051427;hormone receptor binding;5.03242733480806e-05!GO:0005773;vacuole;5.05106828335223e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.17317508417826e-05!GO:0008654;phospholipid biosynthetic process;5.21990232649113e-05!GO:0051170;nuclear import;5.34805704370019e-05!GO:0030036;actin cytoskeleton organization and biogenesis;7.64481172891944e-05!GO:0031072;heat shock protein binding;8.44577346104101e-05!GO:0006606;protein import into nucleus;9.38960630619833e-05!GO:0035257;nuclear hormone receptor binding;0.000103660125103177!GO:0006612;protein targeting to membrane;0.000110892896655668!GO:0005798;Golgi-associated vesicle;0.000112850860739296!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000113883113180667!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000118767549880837!GO:0016853;isomerase activity;0.000118997425313452!GO:0030867;rough endoplasmic reticulum membrane;0.000124509886735131!GO:0005819;spindle;0.000125071855458122!GO:0044452;nucleolar part;0.000126556556934429!GO:0045045;secretory pathway;0.000127564670542475!GO:0006099;tricarboxylic acid cycle;0.000127942513401882!GO:0046356;acetyl-CoA catabolic process;0.000127942513401882!GO:0051187;cofactor catabolic process;0.000128342292146513!GO:0033116;ER-Golgi intermediate compartment membrane;0.000131672595979546!GO:0031324;negative regulation of cellular metabolic process;0.00013986087300479!GO:0005048;signal sequence binding;0.000145570773035871!GO:0005769;early endosome;0.000146463318612725!GO:0045454;cell redox homeostasis;0.000149380895536412!GO:0051168;nuclear export;0.000178071650689048!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000178549209764456!GO:0043021;ribonucleoprotein binding;0.000184321077829243!GO:0006084;acetyl-CoA metabolic process;0.000193618092504327!GO:0016310;phosphorylation;0.000198378477262745!GO:0010468;regulation of gene expression;0.000217368174749017!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000240638735993096!GO:0016859;cis-trans isomerase activity;0.000297059271039706!GO:0008186;RNA-dependent ATPase activity;0.000312118954500952!GO:0019899;enzyme binding;0.000346116271427766!GO:0006261;DNA-dependent DNA replication;0.000381439320576229!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000388583752433941!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000390624866236284!GO:0015399;primary active transmembrane transporter activity;0.000390624866236284!GO:0009892;negative regulation of metabolic process;0.000393859932394547!GO:0008250;oligosaccharyl transferase complex;0.000415440119527945!GO:0030029;actin filament-based process;0.000440117239077098!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000448607156695613!GO:0031968;organelle outer membrane;0.000470100522097476!GO:0003899;DNA-directed RNA polymerase activity;0.000493111584726665!GO:0000323;lytic vacuole;0.000544529885505082!GO:0005764;lysosome;0.000544529885505082!GO:0003729;mRNA binding;0.000554722265609316!GO:0005885;Arp2/3 protein complex;0.000557704380709281!GO:0007051;spindle organization and biogenesis;0.000594229275604006!GO:0006402;mRNA catabolic process;0.00064244607002328!GO:0008033;tRNA processing;0.000655988168507366!GO:0009109;coenzyme catabolic process;0.000676825784706543!GO:0019867;outer membrane;0.000690118357931978!GO:0007243;protein kinase cascade;0.000727420216858203!GO:0005791;rough endoplasmic reticulum;0.000736546718129179!GO:0016481;negative regulation of transcription;0.000742570395377605!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000746836113714071!GO:0045786;negative regulation of progression through cell cycle;0.00082796321124998!GO:0006352;transcription initiation;0.000839803157910656!GO:0006414;translational elongation;0.000845857763568389!GO:0019843;rRNA binding;0.000853252020534329!GO:0046474;glycerophospholipid biosynthetic process;0.000901268554966019!GO:0004004;ATP-dependent RNA helicase activity;0.000901268554966019!GO:0006891;intra-Golgi vesicle-mediated transport;0.000922835214777133!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000952919903509866!GO:0000049;tRNA binding;0.00102230853072965!GO:0004576;oligosaccharyl transferase activity;0.00106030480544153!GO:0048522;positive regulation of cellular process;0.00106745167734093!GO:0001726;ruffle;0.00107177088966612!GO:0048487;beta-tubulin binding;0.00109617690515883!GO:0051325;interphase;0.00110332793703185!GO:0051920;peroxiredoxin activity;0.00110332793703185!GO:0030659;cytoplasmic vesicle membrane;0.0011161721737146!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00114689963201622!GO:0006401;RNA catabolic process;0.00132666456058574!GO:0044433;cytoplasmic vesicle part;0.00135397592480057!GO:0051329;interphase of mitotic cell cycle;0.00136883136239571!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00136883136239571!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00136883136239571!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00136883136239571!GO:0016197;endosome transport;0.00137654822178234!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00141659770837455!GO:0006839;mitochondrial transport;0.00143933723636003!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00145907710146384!GO:0032774;RNA biosynthetic process;0.00145907710146384!GO:0006351;transcription, DNA-dependent;0.0015232827985134!GO:0046467;membrane lipid biosynthetic process;0.00157787215108491!GO:0005741;mitochondrial outer membrane;0.0016063490189823!GO:0043681;protein import into mitochondrion;0.00162917046970441!GO:0016251;general RNA polymerase II transcription factor activity;0.00163955425943355!GO:0046489;phosphoinositide biosynthetic process;0.00167274845776802!GO:0012506;vesicle membrane;0.00173209381500435!GO:0030027;lamellipodium;0.00184393250774611!GO:0006626;protein targeting to mitochondrion;0.00190156125523311!GO:0005684;U2-dependent spliceosome;0.00193121907577082!GO:0000059;protein import into nucleus, docking;0.00195890810355988!GO:0016044;membrane organization and biogenesis;0.00200896707865609!GO:0006334;nucleosome assembly;0.0020305412334573!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00205983844455131!GO:0009165;nucleotide biosynthetic process;0.0020663879399097!GO:0043492;ATPase activity, coupled to movement of substances;0.00220683679531756!GO:0007264;small GTPase mediated signal transduction;0.00223669719637445!GO:0031497;chromatin assembly;0.00226010544443913!GO:0030134;ER to Golgi transport vesicle;0.00233547163557251!GO:0030132;clathrin coat of coated pit;0.00250404154280944!GO:0032940;secretion by cell;0.00265263654400068!GO:0016272;prefoldin complex;0.00267559456231625!GO:0030133;transport vesicle;0.00272700706730828!GO:0008361;regulation of cell size;0.00285747821591976!GO:0018196;peptidyl-asparagine modification;0.00288184315700662!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00288184315700662!GO:0008092;cytoskeletal protein binding;0.00296090050188914!GO:0051252;regulation of RNA metabolic process;0.00302451085579362!GO:0030127;COPII vesicle coat;0.00302913930559017!GO:0012507;ER to Golgi transport vesicle membrane;0.00302913930559017!GO:0005905;coated pit;0.00306289750755057!GO:0042802;identical protein binding;0.00306357355651859!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0030658175881811!GO:0030880;RNA polymerase complex;0.00320433269756878!GO:0003702;RNA polymerase II transcription factor activity;0.00323752609104257!GO:0003690;double-stranded DNA binding;0.00330270430843987!GO:0000775;chromosome, pericentric region;0.00330462522171019!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00331628714521678!GO:0016363;nuclear matrix;0.00360788035644859!GO:0048500;signal recognition particle;0.00368728961914167!GO:0003684;damaged DNA binding;0.00379492966456102!GO:0006497;protein amino acid lipidation;0.00388129768589019!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00390669807915215!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00390669807915215!GO:0035258;steroid hormone receptor binding;0.00398430357159591!GO:0015980;energy derivation by oxidation of organic compounds;0.00406222573177051!GO:0003711;transcription elongation regulator activity;0.00406785152406009!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00406785152406009!GO:0030176;integral to endoplasmic reticulum membrane;0.00420383540124592!GO:0008270;zinc ion binding;0.00420594145954146!GO:0004674;protein serine/threonine kinase activity;0.00433843342978276!GO:0051087;chaperone binding;0.00444729847404346!GO:0045449;regulation of transcription;0.00444729847404346!GO:0017166;vinculin binding;0.00445638018925018!GO:0008287;protein serine/threonine phosphatase complex;0.00456055433515097!GO:0003746;translation elongation factor activity;0.00456055433515097!GO:0016049;cell growth;0.00456055433515097!GO:0005874;microtubule;0.00456055433515097!GO:0030658;transport vesicle membrane;0.00459580998290233!GO:0008139;nuclear localization sequence binding;0.00476675112383636!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00485261840455289!GO:0043624;cellular protein complex disassembly;0.00504967601698272!GO:0015631;tubulin binding;0.00533708174199666!GO:0030521;androgen receptor signaling pathway;0.00541290364896421!GO:0005669;transcription factor TFIID complex;0.00546697833614878!GO:0008637;apoptotic mitochondrial changes;0.00547961492737325!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00582043185901116!GO:0030663;COPI coated vesicle membrane;0.00638599629101371!GO:0030126;COPI vesicle coat;0.00638599629101371!GO:0008312;7S RNA binding;0.00638875438853729!GO:0008632;apoptotic program;0.00644478527856478!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00674964199774575!GO:0000428;DNA-directed RNA polymerase complex;0.00674964199774575!GO:0008601;protein phosphatase type 2A regulator activity;0.00685447426008778!GO:0031902;late endosome membrane;0.00692002838391947!GO:0007006;mitochondrial membrane organization and biogenesis;0.00692249272381123!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00693976059116193!GO:0045047;protein targeting to ER;0.00693976059116193!GO:0006650;glycerophospholipid metabolic process;0.00709142404403028!GO:0006417;regulation of translation;0.00727871791843131!GO:0006302;double-strand break repair;0.00742060461777271!GO:0006383;transcription from RNA polymerase III promoter;0.00747726168844812!GO:0043022;ribosome binding;0.00756329415717845!GO:0030137;COPI-coated vesicle;0.00779048035286783!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00811525776209041!GO:0015002;heme-copper terminal oxidase activity;0.00811525776209041!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00811525776209041!GO:0004129;cytochrome-c oxidase activity;0.00811525776209041!GO:0006611;protein export from nucleus;0.00844866627048415!GO:0031901;early endosome membrane;0.00861429056040748!GO:0051052;regulation of DNA metabolic process;0.00861429056040748!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00881151066205242!GO:0007052;mitotic spindle organization and biogenesis;0.00921723152760195!GO:0030660;Golgi-associated vesicle membrane;0.00923856825191999!GO:0043488;regulation of mRNA stability;0.00923856825191999!GO:0043487;regulation of RNA stability;0.00923856825191999!GO:0043284;biopolymer biosynthetic process;0.00931761784457148!GO:0032508;DNA duplex unwinding;0.00942709471839476!GO:0032392;DNA geometric change;0.00942709471839476!GO:0032984;macromolecular complex disassembly;0.009870064762571!GO:0048468;cell development;0.00988436034563349!GO:0005774;vacuolar membrane;0.0100706328922043!GO:0006376;mRNA splice site selection;0.010145456309716!GO:0000389;nuclear mRNA 3'-splice site recognition;0.010145456309716!GO:0000209;protein polyubiquitination;0.01019659246173!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0107512497972887!GO:0046483;heterocycle metabolic process;0.0107744475817966!GO:0006595;polyamine metabolic process;0.0108234337850891!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0109035059776497!GO:0000159;protein phosphatase type 2A complex;0.0109105141036428!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0109185674367803!GO:0006672;ceramide metabolic process;0.0110742420802386!GO:0006405;RNA export from nucleus;0.0110742420802386!GO:0030384;phosphoinositide metabolic process;0.0114173285650172!GO:0016491;oxidoreductase activity;0.0114827327631859!GO:0042158;lipoprotein biosynthetic process;0.0116475135688224!GO:0003682;chromatin binding;0.0118212200874286!GO:0006818;hydrogen transport;0.0120100364497498!GO:0003678;DNA helicase activity;0.012243569977047!GO:0031529;ruffle organization and biogenesis;0.0126972065276564!GO:0015992;proton transport;0.0129757722015715!GO:0001558;regulation of cell growth;0.0130047935914017!GO:0004177;aminopeptidase activity;0.0131702314521902!GO:0005657;replication fork;0.0136839448833904!GO:0008022;protein C-terminus binding;0.0137120981339117!GO:0006506;GPI anchor biosynthetic process;0.0138219557160441!GO:0005862;muscle thin filament tropomyosin;0.0139040975350019!GO:0043241;protein complex disassembly;0.0146101504952217!GO:0008094;DNA-dependent ATPase activity;0.0149624076139934!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.015483712275338!GO:0005832;chaperonin-containing T-complex;0.015483712275338!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0157549210801118!GO:0008234;cysteine-type peptidase activity;0.0158752067941816!GO:0022406;membrane docking;0.0160807817741354!GO:0048278;vesicle docking;0.0160807817741354!GO:0000082;G1/S transition of mitotic cell cycle;0.0163512261372088!GO:0046914;transition metal ion binding;0.0174375000405284!GO:0032200;telomere organization and biogenesis;0.0175621251318625!GO:0000723;telomere maintenance;0.0175621251318625!GO:0050681;androgen receptor binding;0.0179092889153905!GO:0007088;regulation of mitosis;0.0180822344864943!GO:0009112;nucleobase metabolic process;0.0182118247923565!GO:0031625;ubiquitin protein ligase binding;0.0183752443688965!GO:0006144;purine base metabolic process;0.0184616593258861!GO:0022890;inorganic cation transmembrane transporter activity;0.0186529939473707!GO:0030118;clathrin coat;0.0186718859540693!GO:0051098;regulation of binding;0.0191372840754056!GO:0006505;GPI anchor metabolic process;0.0192201381892558!GO:0009116;nucleoside metabolic process;0.0192201381892558!GO:0000776;kinetochore;0.0193073697373073!GO:0019783;small conjugating protein-specific protease activity;0.0197706145445198!GO:0016584;nucleosome positioning;0.0199509575494362!GO:0000075;cell cycle checkpoint;0.0200303661435959!GO:0006268;DNA unwinding during replication;0.0205112294389034!GO:0006355;regulation of transcription, DNA-dependent;0.0211568332743473!GO:0030433;ER-associated protein catabolic process;0.0214946211486379!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0214946211486379!GO:0009967;positive regulation of signal transduction;0.0215477096382001!GO:0031970;organelle envelope lumen;0.021743123749854!GO:0006338;chromatin remodeling;0.0219229748243394!GO:0005758;mitochondrial intermembrane space;0.0220936361593455!GO:0045892;negative regulation of transcription, DNA-dependent;0.0221084109828146!GO:0044437;vacuolar part;0.0222586323319599!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0223087952024626!GO:0007030;Golgi organization and biogenesis;0.0223894785589379!GO:0031124;mRNA 3'-end processing;0.0223894785589379!GO:0005765;lysosomal membrane;0.0224865869975909!GO:0003677;DNA binding;0.022712135643427!GO:0006904;vesicle docking during exocytosis;0.0228068336303333!GO:0051128;regulation of cellular component organization and biogenesis;0.0231451198276733!GO:0046519;sphingoid metabolic process;0.0232601139304419!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0233966237258079!GO:0051101;regulation of DNA binding;0.0234772273600433!GO:0004527;exonuclease activity;0.0235537247716574!GO:0050811;GABA receptor binding;0.0237514982144459!GO:0046966;thyroid hormone receptor binding;0.0238727861343525!GO:0004843;ubiquitin-specific protease activity;0.0239417885240335!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.024529930023518!GO:0007040;lysosome organization and biogenesis;0.024529930023518!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0248636002994541!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0250011730983868!GO:0010257;NADH dehydrogenase complex assembly;0.0250011730983868!GO:0033108;mitochondrial respiratory chain complex assembly;0.0250011730983868!GO:0007017;microtubule-based process;0.025083034031121!GO:0048518;positive regulation of biological process;0.0257639871157076!GO:0006892;post-Golgi vesicle-mediated transport;0.0260004790265054!GO:0065009;regulation of a molecular function;0.0261887011857334!GO:0005869;dynactin complex;0.0275690022501113!GO:0042168;heme metabolic process;0.0281754245718005!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0283979145242946!GO:0031326;regulation of cellular biosynthetic process;0.028740264867015!GO:0022411;cellular component disassembly;0.028778937488054!GO:0006778;porphyrin metabolic process;0.0289212265086169!GO:0033013;tetrapyrrole metabolic process;0.0289212265086169!GO:0005100;Rho GTPase activator activity;0.0294323382635049!GO:0006091;generation of precursor metabolites and energy;0.0295493114018191!GO:0003756;protein disulfide isomerase activity;0.0295883389336699!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0295883389336699!GO:0030518;steroid hormone receptor signaling pathway;0.0297117647358788!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0314237289933747!GO:0008538;proteasome activator activity;0.0314922676211295!GO:0022415;viral reproductive process;0.0315388819371669!GO:0003725;double-stranded RNA binding;0.0317539355733445!GO:0008180;signalosome;0.0318723910843035!GO:0001836;release of cytochrome c from mitochondria;0.0318847531667175!GO:0030119;AP-type membrane coat adaptor complex;0.0328476856819645!GO:0009889;regulation of biosynthetic process;0.0329047398339556!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0330138730338366!GO:0019206;nucleoside kinase activity;0.0331211862769847!GO:0000339;RNA cap binding;0.0332658775009105!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0332658775009105!GO:0005784;translocon complex;0.0336342702956192!GO:0006354;RNA elongation;0.0336342702956192!GO:0005938;cell cortex;0.0341007284475763!GO:0030125;clathrin vesicle coat;0.0345686968415304!GO:0030665;clathrin coated vesicle membrane;0.0345686968415304!GO:0006740;NADPH regeneration;0.034570683636114!GO:0006098;pentose-phosphate shunt;0.034570683636114!GO:0016791;phosphoric monoester hydrolase activity;0.0349813370390932!GO:0006310;DNA recombination;0.034986847735918!GO:0043065;positive regulation of apoptosis;0.035331846394591!GO:0005665;DNA-directed RNA polymerase II, core complex;0.035331846394591!GO:0051059;NF-kappaB binding;0.0358394370635253!GO:0030031;cell projection biogenesis;0.0372982319894189!GO:0043068;positive regulation of programmed cell death;0.0379106574554709!GO:0030911;TPR domain binding;0.0382150651227484!GO:0009451;RNA modification;0.0390184534210311!GO:0035035;histone acetyltransferase binding;0.0390905689873554!GO:0008168;methyltransferase activity;0.0399472244157!GO:0016790;thiolester hydrolase activity;0.0402679487860866!GO:0006007;glucose catabolic process;0.0405307517719056!GO:0016741;transferase activity, transferring one-carbon groups;0.0405307517719056!GO:0045893;positive regulation of transcription, DNA-dependent;0.0405497325581989!GO:0006378;mRNA polyadenylation;0.0415097425943262!GO:0000781;chromosome, telomeric region;0.0416250828113623!GO:0008047;enzyme activator activity;0.0416753852504299!GO:0043189;H4/H2A histone acetyltransferase complex;0.0418485115102167!GO:0004221;ubiquitin thiolesterase activity;0.0422926591228921!GO:0031371;ubiquitin conjugating enzyme complex;0.0424833781894538!GO:0045767;regulation of anti-apoptosis;0.0428355760241309!GO:0005876;spindle microtubule;0.0428355760241309!GO:0008610;lipid biosynthetic process;0.0429733116417881!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0433905859730329!GO:0016311;dephosphorylation;0.0434552811550313!GO:0000786;nucleosome;0.0434552811550313!GO:0005637;nuclear inner membrane;0.0435706859951544!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0439260876800428!GO:0007004;telomere maintenance via telomerase;0.0442137210026249!GO:0000096;sulfur amino acid metabolic process;0.0446877901280647!GO:0045941;positive regulation of transcription;0.045155877714661!GO:0043130;ubiquitin binding;0.0455849440813192!GO:0032182;small conjugating protein binding;0.0455849440813192!GO:0009615;response to virus;0.0467782203676577!GO:0051540;metal cluster binding;0.0471526739172443!GO:0051536;iron-sulfur cluster binding;0.0471526739172443!GO:0008097;5S rRNA binding;0.0471526739172443!GO:0006914;autophagy;0.0472972102774221!GO:0004532;exoribonuclease activity;0.0472972102774221!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0472972102774221!GO:0044262;cellular carbohydrate metabolic process;0.0472972102774221!GO:0008017;microtubule binding;0.0473152611371749!GO:0019904;protein domain specific binding;0.0473152611371749!GO:0004680;casein kinase activity;0.0473682773189928!GO:0007021;tubulin folding;0.047635000740054!GO:0007093;mitotic cell cycle checkpoint;0.0478488266818402!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0479236209760208!GO:0006897;endocytosis;0.0491498854324102!GO:0010324;membrane invagination;0.0491498854324102!GO:0016126;sterol biosynthetic process;0.0496145748087738!GO:0031418;L-ascorbic acid binding;0.0496145748087738!GO:0000738;DNA catabolic process, exonucleolytic;0.0496145748087738!GO:0006360;transcription from RNA polymerase I promoter;0.0496145748087738!GO:0046979;TAP2 binding;0.0496145748087738!GO:0046977;TAP binding;0.0496145748087738!GO:0046978;TAP1 binding;0.0496145748087738
 |sample_id=10493
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=mesothelium
 |top_motifs=FOXQ1:1.28511443378;PITX1..3:1.26387129252;SP1:1.23733658422;HMGA1,2:1.17834270083;ADNP_IRX_SIX_ZHX:1.11638871109;PDX1:1.07533721399;CDX1,2,4:0.981074772004;HIF1A:0.918469427304;ZNF148:0.884125432389;XCPE1{core}:0.869905682944;ELK1,4_GABP{A,B1}:0.860203653807;EN1,2:0.803534820594;bHLH_family:0.772152479283;IRF7:0.717869182648;EVI1:0.629142985514;AHR_ARNT_ARNT2:0.619355259339;STAT5{A,B}:0.613435003593;IRF1,2:0.587011107453;LHX3,4:0.573404595698;ZNF384:0.536108415396;CRX:0.527920942253;TEAD1:0.525022680293;ONECUT1,2:0.516000183397;RXR{A,B,G}:0.506925493474;T:0.499179035627;XBP1:0.497281929918;TBX4,5:0.467953200043;FOXM1:0.450423290094;FOXP1:0.435107139974;MYOD1:0.412814317675;NRF1:0.386179708554;HOX{A4,D4}:0.36840809849;ZNF143:0.363398593607;PAX6:0.360438889907;STAT1,3:0.357013834792;BACH2:0.334057605502;NFE2L2:0.326077897021;VSX1,2:0.323087322135;NR3C1:0.32205605681;PAX4:0.315669952941;FOXA2:0.306336987567;NKX2-2,8:0.305463280026;ZIC1..3:0.301504951515;MYB:0.2912563905;TFDP1:0.246488473414;ATF4:0.239823041319;TFAP2B:0.239597595336;NFE2:0.230731996583;TEF:0.224935840569;TLX1..3_NFIC{dimer}:0.223084613928;PRRX1,2:0.205423241312;HOX{A5,B5}:0.199251404727;FOS_FOS{B,L1}_JUN{B,D}:0.178704615611;NKX3-2:0.173066577895;POU3F1..4:0.167421243868;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.166631399493;AIRE:0.164515602804;CEBPA,B_DDIT3:0.147478410878;STAT2,4,6:0.142178448758;NKX6-1,2:0.138360971847;NFKB1_REL_RELA:0.12941883888;NFY{A,B,C}:0.123518179883;EP300:0.117795014711;ZBTB16:0.115703643583;HBP1_HMGB_SSRP1_UBTF:0.11174361572;ZFP161:0.0987983323848;HSF1,2:0.097165641357;RBPJ:0.0953472034564;PAX2:0.0690200233185;RFX1:0.0669854253385;LMO2:0.0645403000875;JUN:0.0429059764744;TP53:0.0388589428724;MTE{core}:0.0361716571659;HIC1:0.031923566207;FOSL2:0.027103984201;RXRA_VDR{dimer}:0.00722252463838;TOPORS:0.0047661320313;FOXD3:-0.000917554849787;ESRRA:-0.00528841129809;GTF2A1,2:-0.00845506565488;HLF:-0.0192942976047;GFI1B:-0.0195457206177;MAZ:-0.0266227026994;POU6F1:-0.036080297948;E2F1..5:-0.0452880191908;EGR1..3:-0.0468681504756;NANOG:-0.048359185095;ARID5B:-0.0518887665464;POU1F1:-0.0623278819789;IKZF1:-0.0630207181986;HNF1A:-0.0662326185081;NFATC1..3:-0.0668733804351;NR5A1,2:-0.0672936849773;HOXA9_MEIS1:-0.0726254483461;GTF2I:-0.0752286654615;GLI1..3:-0.0856911328803;HES1:-0.0864077894033;CREB1:-0.0922043482949;SNAI1..3:-0.102258772864;ZEB1:-0.119887125732;NR6A1:-0.127758780093;PPARG:-0.135132512245;FOXP3:-0.141739507638;OCT4_SOX2{dimer}:-0.16095609703;CUX2:-0.163037374765;FOX{F1,F2,J1}:-0.168960191453;PAX8:-0.176104093184;NKX3-1:-0.177657494228;TFCP2:-0.178288264315;SOX17:-0.179059760891;ZBTB6:-0.183698610693;GATA6:-0.189797395175;ATF5_CREB3:-0.194970102435;RORA:-0.195116656565;GFI1:-0.203920290937;TAL1_TCF{3,4,12}:-0.20521521414;ZNF238:-0.212689003047;NKX2-3_NKX2-5:-0.21452832337;MEF2{A,B,C,D}:-0.214848220055;PAX3,7:-0.242211656122;SRF:-0.246807336994;FOX{I1,J2}:-0.246820879048;POU5F1:-0.254997931647;HOX{A6,A7,B6,B7}:-0.282176435658;UFEwm:-0.294231188627;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.327639992946;PATZ1:-0.333777961852;RREB1:-0.348988293944;TFAP2{A,C}:-0.354322393211;DBP:-0.355904159768;ATF6:-0.356510942171;HNF4A_NR2F1,2:-0.357763478856;FOXL1:-0.378353800004;NFIX:-0.380318235664;LEF1_TCF7_TCF7L1,2:-0.391146382168;ELF1,2,4:-0.396955648947;HAND1,2:-0.420732314464;IKZF2:-0.430686453758;SPIB:-0.430812097126;FOX{D1,D2}:-0.442761750096;POU2F1..3:-0.443595810767;CDC5L:-0.447783416028;MYBL2:-0.46071349802;DMAP1_NCOR{1,2}_SMARC:-0.470733090509;FOXN1:-0.471213706155;ALX1:-0.481750564151;REST:-0.491960143896;RFX2..5_RFXANK_RFXAP:-0.495765931869;PAX1,9:-0.52415434186;RUNX1..3:-0.526080501894;MAFB:-0.535383785808;SOX2:-0.537070648786;ETS1,2:-0.547526039966;PBX1:-0.551082817164;GCM1,2:-0.552618859088;PAX5:-0.564958141969;ZNF423:-0.576929153609;BREu{core}:-0.578544732787;MZF1:-0.599143390659;EBF1:-0.626109179926;NFE2L1:-0.631396154363;MTF1:-0.665108475682;SOX5:-0.672400091955;NR1H4:-0.67357798375;SPI1:-0.68176309145;SOX{8,9,10}:-0.707326717437;SMAD1..7,9:-0.710452631596;AR:-0.72357640339;KLF4:-0.745321447223;SREBF1,2:-0.771114341277;ALX4:-0.799957434933;NFIL3:-0.803412044559;PRDM1:-0.824478642929;TBP:-0.832382778956;TFAP4:-0.868429578363;NKX2-1,4:-0.881691134765;TLX2:-0.88938102582;GZF1:-0.946557630775;GATA4:-0.967126022539;NHLH1,2:-0.978613257159;ATF2:-0.996759613503;MED-1{core}:-1.06921078758;HMX1:-1.08394677839;MYFfamily:-1.08808056142;BPTF:-1.11993372314;FOXO1,3,4:-1.19049796932;TGIF1:-1.23059246305;ESR1:-1.24506691522;YY1:-1.30404013092;NANOG{mouse}:-1.68845706401;SPZ1:-1.760428143
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10493-107B7;search_select_hide=table117:FF:10493-107B7
 }}

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FF:10493-107B7: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 14:27, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0