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{{f5samples
{{f5samples
|id=FF:10568-108B1
|DRA_sample_Accession=CAGE@SAMD00005180
|name=mesenchymal stem cell line:Hu5/E18
|accession_numbers=CAGE;DRX007935;DRR008807;DRZ000232;DRZ001617;DRZ011582;DRZ012967
|sample_id=10568
|ancestors_in_anatomy_facet=UBERON:0002384,UBERON:0000479,UBERON:0000061,UBERON:0000465,UBERON:0001062
|rna_tube_id=108B1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000723,CL:0000048,CL:0000548,CL:0002320,CL:0002371,CL:0000219,CL:0000134,CL:0000255,CL:0000034
|rna_box=108
|rna_position=B1
|sample_cell_lot=
|sample_cell_catalog=RCB2366
|sample_company=RIKEN Bioresource centre
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=42 year old adult
|sample_tissue=skeletal muscle
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=42
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=1.64
|rna_od260/280=2.12
|sample_cell_type=mesenchymal stem cell
|sample_cell_line=Hu5/E18
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=12.9305
|rna_concentration=0.51722
|sample_note=
|profile_hcage=CNhs11718,LSID819,release009,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr12:81110684..81110700,+!p1@MYF5!3.10!1261.69!MYF5;;chr1:40105299..40105326,-!p1@HEYL!1.84!68.80!HEYL;;chr11:17741111..17741124,+!p1@MYOD1!1.63!41.60!MYOD1;;chr14:61116183..61116208,-!p1@SIX1!1.61!144.41!SIX1;;chr2:5832508..5832524,+!p1@SOX11!1.53!33.20!SOX11;;chr16:54320617..54320643,-!p3@IRX3!1.51!40.00!IRX3;;chr11:17741254..17741282,+!p2@MYOD1!1.51!31.60!MYOD1;;chr21:36421535..36421610,-!p2@RUNX1!1.41!86.41!RUNX1;;chr17:46675558..46675577,-!p2@HOXB6!1.39!23.60!HOXB6;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.38!23.20!ZBED1;;chr2:85981107..85981120,+!p3@ATOH8!1.35!21.20!ATOH8;;chr16:54320646..54320672,-!p2@IRX3!1.34!31.60!IRX3;;chr15:57511609..57511651,+!p2@TCF12!1.33!34.00!TCF12;;chr7:19157248..19157268,-!p1@TWIST1!1.32!54.40!TWIST1;;chr17:46622205..46622218,-!p3@HOXB2!1.30!22.00!HOXB2;;chr19:38720294..38720348,-!p1@DPF1!1.28!22.40!DPF1;;chr2:239148671..239148686,-!p1@HES6!1.27!63.20!HES6;;chr4:111558135..111558198,-!p2@PITX2!1.26!17.20!PITX2;;chr2:45236540..45236577,-!p1@SIX2!1.25!16.80!SIX2;;chr17:46622229..46622257,-!p6@HOXB2!1.24!19.20!HOXB2;;chr17:46675420..46675465,-!p3@HOXB6!1.23!18.40!HOXB6;;chr10:131762504..131762555,-!p1@EBF3!1.23!16.00!EBF3;;chr2:85981073..85981091,+!p5@ATOH8!1.22!15.60!ATOH8;;chr16:86600426..86600441,+!p1@FOXC2!1.21!37.60!FOXC2;;chr16:54320675..54320715,-!p1@IRX3!1.21!32.40!IRX3;;chr2:85980951..85981004,+!p1@ATOH8!1.21!24.80!ATOH8;;chr5:72744594..72744609,-!p1@FOXD1!1.15!59.20!FOXD1;;chr2:85981027..85981047,+!p8@ATOH8!1.13!12.40!ATOH8;;chr11:125034640..125034655,+!p1@PKNOX2!1.11!12.00!PKNOX2;;chr15:42749722..42749739,-!p2@ZFP106!1.10!20.80!ZFP106;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.09!11.20!HOXC5;;chr3:52001448..52001478,-!p2@PCBP4!1.08!155.21!PCBP4;;chr16:31076273..31076288,-!p11@ZNF668!1.07!10.80!ZNF668;;chr8:49833978..49833996,-!p1@SNAI2!1.06!219.22!SNAI2;;chr17:46622440..46622477,-!p5@HOXB2!1.05!11.60!HOXB2;;chr12:81101472..81101483,+!p2@MYF6!1.03!9.60!MYF6;;chr15:83953397..83953425,-!p1@BNC1!1.02!10.80!BNC1;;chr12:125002827..125002855,-!p5@NCOR2!1.01!13.20!NCOR2;;chr2:85981008..85981025,+!p7@ATOH8!1.01!9.20!ATOH8;;chr6:31126291..31126399,+!p1@TCF19!1.00!88.01!TCF19;;chr11:46299199..46299233,+!p1@CREB3L1!1.00!48.00!CREB3L1;;chr8:67525443..67525459,-!p2@MYBL1!1.00!13.60!MYBL1;;chr5:176738887..176738934,-!p1@MXD3!0.98!58.80!MXD3;;chr2:85980919..85980942,+!p4@ATOH8!0.98!9.20!ATOH8;;chr20:30193083..30193098,+!p1@ID1!0.97!684.85!ID1;;chr3:52001426..52001447,-!p3@PCBP4!0.97!24.00!PCBP4;;chr17:48072574..48072597,-!p1@DLX3!0.97!8.40!DLX3;;chr21:38071430..38071456,+!p1@SIM2!0.97!8.40!SIM2;;chr8:49833948..49833973,-!p2@SNAI2!0.96!53.60!SNAI2;;chr17:46621101..46621143,-!p7@HOXB2!0.96!11.20!HOXB2;;chr5:88178983..88179012,-!p1@MEF2C!0.95!62.80!MEF2C;;chr14:61116168..61116180,-!p2@SIX1!0.95!9.20!SIX1;;chr11:17741084..17741094,+!p3@MYOD1!0.95!8.00!MYOD1;;chr11:17741206..17741215,+!p6@MYOD1!0.93!7.60!MYOD1;;chr17:46622175..46622186,-!p12@HOXB2!0.93!7.60!HOXB2;;chr17:46671108..46671147,-!p1@HOXB5!0.93!7.60!HOXB5;;chr17:46622070..46622109,-!p1@HOXB2!0.92!16.80!HOXB2;;chr12:81101404..81101421,+!p1@MYF6!0.91!7.20!MYF6;;chr3:114343768..114343822,-!p1@ZBTB20!0.90!32.00!ZBTB20;;chr7:44924939..44924993,-!p2@PURB!0.90!14.00!PURB;;chr4:81104985..81105005,+!p4@PRDM8!0.88!8.00!PRDM8;;chr1:23885981..23886002,-!p1@ID3!0.87!1180.08!ID3;;chr1:8934931..8934947,-!p4@ENO1!0.87!22.40!ENO1;;chr19:23299814..23299844,+!p1@ZNF730!0.87!8.00!ZNF730;;chr16:31076332..31076388,-!p3@ZNF668!0.87!6.40!ZNF668;;chr1:119530493..119530572,-!p1@TBX15!0.87!6.40!TBX15;;chr21:38071403..38071428,+!p2@SIM2!0.87!6.40!SIM2;;chr3:141087393..141087426,+!p3@ZBTB38!0.86!26.40!ZBTB38;;chr16:54320101..54320125,-!p4@IRX3!0.86!9.20!IRX3;;chr2:85981222..85981259,+!p2@ATOH8!0.85!10.40!ATOH8;;chr4:81105027..81105039,+!p3@PRDM8!0.85!7.20!PRDM8;;chr2:85980768..85980783,+!p10@ATOH8!0.85!6.00!ATOH8;;chr17:46675586..46675600,-!p6@HOXB6!0.85!6.00!HOXB6;;chr7:27205136..27205164,-!p1@HOXA9!0.85!6.00!HOXA9;;chr20:32274150..32274166,-!p2@E2F1!0.84!11.60!E2F1;;chr17:46688334..46688385,-!p1@HOXB7!0.84!8.80!HOXB7;;chr2:238536207..238536290,+!p2@LRRFIP1!0.83!59.60!LRRFIP1;;chr1:151032860..151032918,+!p1@MLLT11!0.82!71.60!MLLT11;;chr1:151032922..151032951,+!p2@MLLT11!0.82!9.60!MLLT11;;chr16:54320158..54320200,-!p5@IRX3!0.82!8.40!IRX3;;chr17:46675619..46675642,-!p5@HOXB6!0.82!5.60!HOXB6;;chr17:46690839..46690884,-!p1@HOXB8!0.82!5.60!HOXB8;;chr11:125034605..125034636,+!p2@PKNOX2!0.82!5.60!PKNOX2;;chr12:54447637..54447659,+!p4@HOXC4!0.82!5.60!HOXC4;;chr12:77459306..77459365,-!p1@E2F7!0.80!71.60!E2F7;;chr8:67525473..67525518,-!p1@MYBL1!0.80!12.80!MYBL1;;chr17:46687959..46688007,-!p2@HOXB7!0.80!7.60!HOXB7;;chr2:176994408..176994492,+!p1@HOXD8!0.79!5.20!HOXD8;;chr2:45236579..45236596,-!p2@SIX2!0.79!5.20!SIX2;;chr6:45390025..45390076,+!p2@RUNX2!0.78!12.80!RUNX2;;chr20:32274179..32274213,-!p1@E2F1!0.77!35.20!E2F1;;chr14:73360799..73360817,-!p1@DPF3!0.77!18.40!DPF3;;chr7:150945754..150945789,-!p2@SMARCD3!0.77!16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0.19!1.20!MLL2;;chr12:80085255..80085284,-!p9@PAWR!0.19!1.20!PAWR;;chr6:20402070..20402082,+!p5@E2F3!0.19!0.80!E2F3;;chr7:106826626..106826630,+!p3@HBP1!0.19!0.80!HBP1;;chr19:58193388..58193411,+!p2@ZNF551,p4@ZNF776!0.19!0.80!ZNF551;;chr19:58666502..58666519,-!p4@ZNF329!0.19!0.80!ZNF329;;chr1:23857325..23857416,-!p2@E2F2!0.19!0.80!E2F2;;chr3:37217756..37217844,-!p1@LRRFIP2!0.18!87.61!LRRFIP2;;chr13:20357063..20357105,-!p1@PSPC1!0.18!43.60!PSPC1;;chr22:41601296..41601355,+!p1@L3MBTL2!0.18!15.20!L3MBTL2;;chr12:96588219..96588263,+!p2@ELK3!0.18!9.20!ELK3;;chr16:30406721..30406820,+!p1@ZNF48!0.18!6.80!ZNF48;;chr16:3285144..3285191,-!p1@ZNF200!0.18!6.00!ZNF200;;chr15:77713025..77713081,+!p2@HMG20A!0.18!5.20!HMG20A;;chr19:1652555..1652568,-!p2@TCF3!0.18!4.80!TCF3;;chr1:153940354..153940395,+!p1@CREB3L4!0.18!4.80!CREB3L4;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!0.18!4.40!HNRPK;;chr2:157198916..157198978,-!p2@NR4A2!0.18!4.00!NR4A2;;chr2:27357446..27357475,-!p2@PREB!0.18!4.00!PREB;;chr19:58095501..58095535,+!p1@ZIK1!0.18!4.00!ZIK1;;chr1:27022839..27022890,+!p3@ARID1A!0.18!3.20!ARID1A;;chr6:56954867..56954882,+!p2@ZNF451!0.18!3.20!ZNF451;;chr7:55955139..55955190,+!p1@ZNF713,p2@MRPS17!0.18!2.80!ZNF713;;chr14:45722287..45722308,-!p2@MIS18BP1!0.18!2.80!MIS18BP1;;chr3:114819124..114819200,-!p3@ZBTB20!0.18!2.40!ZBTB20;;chr2:71127699..71127744,+!p1@VAX2!0.18!2.00!VAX2;;chr1:935398..935465,-!p2@HES4!0.18!2.00!HES4;;chr16:31085058..31085078,-!p2@ZNF668!0.18!2.00!ZNF668;;chr5:150284532..150284549,-!p1@ZNF300!0.18!2.00!ZNF300;;chr4:56413067..56413086,-!p4@CLOCK!0.18!1.60!CLOCK;;chr16:29817399..29817425,+!p13@MAZ!0.18!1.60!MAZ;;chr12:124457725..124457736,+!p2@ZNF664!0.18!1.60!ZNF664;;chr12:66218573..66218596,+!p7@HMGA2!0.18!1.20!HMGA2;;chr6:43139248..43139261,+!p4@SRF!0.18!1.20!SRF;;chr7:137686552..137686564,-!p9@CREB3L2!0.18!1.20!CREB3L2;;chr8:145980968..145980996,-!p2@ZNF251!0.18!1.20!ZNF251;;chr15:57210795..57210809,+!p8@TCF12!0.18!1.20!TCF12;;chr22:42269885..42269899,+!p4@SREBF2!0.18!1.20!SREBF2;;chr4:124361..124372,+!p3@ZNF718!0.18!1.20!ZNF718;;chr2:145275228..145275241,-!p11@ZEB2!0.18!0.80!ZEB2;;chr12:104532062..104532071,-!p6@NFYB!0.18!0.80!NFYB;;chr12:10875612..10875631,-!p9@CSDA!0.18!0.80!CSDA;;chr12:27485889..27485900,+!p4@ARNTL2!0.18!0.80!ARNTL2;;chr13:114238987..114238994,+!p2@TFDP1!0.18!0.80!TFDP1;;chr13:41556186..41556208,-!p12@ELF1!0.18!0.80!ELF1;;chr1:67395833..67395851,+!p8@MIER1!0.18!0.80!MIER1;;chr17:38498510..38498540,+!p7@RARA!0.18!0.80!RARA;;chr17:42295777..42295816,-!p7@UBTF!0.18!0.80!UBTF;;chr5:92919100..92919135,+!p3@NR2F1!0.18!0.80!NR2F1;;chr7:150065733..150065752,+!p4@REPIN1,p4@ZNF775!0.18!0.80!ZNF775;;chr9:86595503..86595550,-!p2@HNRNPK!0.17!213.21!HNRPK;;chr1:43148059..43148108,+!p1@YBX1!0.17!85.21!YBX1;;chr19:11071685..11071798,+!p1@SMARCA4!0.17!37.20!SMARCA4;;chr12:51157837..51157892,+!p1@ATF1!0.17!28.40!ATF1;;chr19:6424783..6424802,-!p2@KHSRP!0.17!26.40!KHSRP;;chr10:96122682..96122730,-!p1@NOC3L!0.17!19.20!NOC3L;;chr11:62369229..62369289,-!p2@MTA2!0.17!19.20!MTA2;;chr12:104531945..104531996,-!p1@NFYB!0.17!18.00!NFYB;;chr19:58609577..58609628,-!p1@ZSCAN18!0.17!16.40!ZSCAN18;;chr4:124374..124410,+!p2@ZNF718!0.17!13.20!ZNF718;;chr14:89883509..89883587,-!p2@FOXN3!0.17!8.40!FOXN3;;chr13:45151259..45151326,-!p2@TSC22D1!0.17!7.20!TSC22D1;;chr19:57988878..57988941,-!p1@ZNF772!0.17!6.80!ZNF772;;chr19:35264089..35264146,-!p1@ZNF599!0.17!6.00!ZNF599;;chr19:58258202..58258226,+!p3@ZNF776!0.17!5.60!ZNF776;;chr8:42698194..42698239,-!p2@THAP1!0.17!5.20!THAP1;;chr19:11959532..11959593,+!p1@ZNF439!0.17!4.40!ZNF439;;chr17:38498402..38498445,+!p3@RARA!0.17!4.00!RARA;;chr10:44070016..44070069,-!p1@ZNF239!0.17!3.20!ZNF239;;chr4:4861385..4861398,+!p1@MSX1!0.17!3.20!MSX1;;chr5:178487354..178487408,+!p1@ZNF354C!0.17!3.20!ZNF354C;;chr12:57919293..57919311,+!p3@MBD6!0.17!2.80!MBD6;;chr11:128392309..128392350,-!p3@ETS1!0.17!2.40!ETS1;;chr2:187350951..187350962,+!p2@ZC3H15!0.17!2.40!ZC3H15;;chr7:64126535..64126559,+!p2@ZNF107!0.17!2.00!ZNF107;;chr1:211433151..211433191,+!p5@RCOR3!0.17!2.00!RCOR3;;chr18:3449720..3449749,+!p2@TGIF1!0.17!2.00!TGIF1;;chr3:44666503..44666516,+!p3@ZNF197!0.17!1.60!ZNF197;;chr18:51751066..51751077,-!p6@MBD2!0.17!1.20!MBD2;;chr18:52989081..52989117,-!p7@TCF4!0.17!1.20!TCF4;;chr18:56530136..56530199,+!p3@ZNF532!0.17!1.20!ZNF532;;chr1:93544791..93544807,+!p2@MTF2!0.17!1.20!MTF2;;chr7:77428227..77428242,+!p3@PHTF2!0.17!1.20!PHTF2;;chr6:122720681..122720713,+!p3@HSF2!0.17!0.80!HSF2;;chr6:43140095..43140145,+!p5@SRF!0.17!0.80!SRF;;chr1:211432784..211432796,+!p8@RCOR3!0.17!0.80!RCOR3;;chr3:114343195..114343206,-!p11@ZBTB20!0.17!0.80!ZBTB20;;chr3:126194866..126194887,-!p3@ZXDC!0.17!0.80!ZXDC;;chr9:2016758..2016782,+!p11@SMARCA2!0.17!0.80!SMARCA2;;chrX:129244499..129244506,-!p7@ELF4!0.17!0.80!ELF4;;chr19:19303731..19303783,+!p1@RFXANK!0.16!30.40!RFXANK;;chr4:4291861..4291913,-!p1@LYAR!0.16!30.00!LYAR;;chr3:187463248..187463264,-!p1@BCL6!0.16!27.60!BCL6;;chr16:67063036..67063088,+!p1@CBFB!0.16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|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=FF:10568-108B1
|fonse_cell_line=FF:10568-108B1
|fonse_cell_line_closure=FF:10568-108B1
|fonse_cell_line_closure=FF:10568-108B1
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesenchymal%2520stem%2520cell%2520line%253aHu5%252fE18.CNhs11718.10568-108B1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesenchymal%2520stem%2520cell%2520line%253aHu5%252fE18.CNhs11718.10568-108B1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/mesenchymal%2520stem%2520cell%2520line%253aHu5%252fE18.CNhs11718.10568-108B1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mesenchymal%2520stem%2520cell%2520line%253aHu5%252fE18.CNhs11718.10568-108B1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/mesenchymal%2520stem%2520cell%2520line%253aHu5%252fE18.CNhs11718.10568-108B1.hg38.nobarcode.ctss.bed.gz
|id=FF:10568-108B1
|is_a=CL:0000134;;EFO:0002091;;FF:0000003;;FF:0000210
|is_obsolete=
|library_id=CNhs11718
|library_id_phase_based=2:CNhs11718
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10568
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10568
|name=mesenchymal stem cell line:Hu5/E18
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11718,LSID819,release009,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=108
|rna_catalog_number=
|rna_concentration=0.51722
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.64
|rna_od260/280=2.12
|rna_position=B1
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=108B1
|rna_weight_ug=12.9305
|sample_age=42
|sample_category=cell lines
|sample_cell_catalog=RCB2366
|sample_cell_line=Hu5/E18
|sample_cell_lot=
|sample_cell_type=mesenchymal stem cell
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=42 year old adult
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.51183866191908e-254!GO:0043226;organelle;2.73570716302961e-207!GO:0043229;intracellular organelle;5.28793347212743e-207!GO:0043231;intracellular membrane-bound organelle;7.64525054261794e-197!GO:0043227;membrane-bound organelle;1.802509914785e-196!GO:0005737;cytoplasm;1.64146155473045e-185!GO:0044422;organelle part;4.62620211452525e-163!GO:0044446;intracellular organelle part;8.93015666774166e-162!GO:0044444;cytoplasmic part;9.08258214833065e-131!GO:0032991;macromolecular complex;6.63715472524122e-120!GO:0030529;ribonucleoprotein complex;1.5269032160664e-92!GO:0005634;nucleus;2.33583623962242e-86!GO:0044237;cellular metabolic process;2.93161987414273e-85!GO:0044238;primary metabolic process;1.05913521496996e-84!GO:0005515;protein binding;1.6038134910484e-82!GO:0044428;nuclear part;4.73776531800083e-82!GO:0043170;macromolecule metabolic process;3.12975046461147e-80!GO:0043233;organelle lumen;1.36850607711186e-75!GO:0031974;membrane-enclosed lumen;1.36850607711186e-75!GO:0003723;RNA binding;6.39437512812777e-68!GO:0005739;mitochondrion;2.43448282897983e-66!GO:0043234;protein complex;5.57725752417513e-63!GO:0005840;ribosome;1.48511235684368e-54!GO:0043228;non-membrane-bound organelle;2.9959185876293e-51!GO:0043232;intracellular non-membrane-bound organelle;2.9959185876293e-51!GO:0006396;RNA processing;2.21598644905195e-50!GO:0016043;cellular component organization and biogenesis;2.20059925587811e-49!GO:0003735;structural constituent of ribosome;1.08606811738742e-47!GO:0031981;nuclear lumen;1.32760298745267e-47!GO:0006412;translation;5.37461674717678e-47!GO:0031090;organelle membrane;1.15811785237529e-46!GO:0043283;biopolymer metabolic process;1.83454840619546e-46!GO:0044429;mitochondrial part;4.51034705405076e-45!GO:0019538;protein metabolic process;1.76652812759813e-44!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.76047998275796e-44!GO:0010467;gene expression;1.20069381617735e-41!GO:0016071;mRNA metabolic process;5.94763060899135e-41!GO:0031967;organelle envelope;1.19992280255315e-40!GO:0031975;envelope;2.9070247819993e-40!GO:0033279;ribosomal subunit;4.28929883727204e-40!GO:0044260;cellular macromolecule metabolic process;5.39644152936452e-39!GO:0005829;cytosol;1.12773518589695e-38!GO:0044267;cellular protein metabolic process;1.66175028114507e-38!GO:0008380;RNA splicing;2.16591971867872e-38!GO:0006996;organelle organization and biogenesis;5.89498417969548e-38!GO:0015031;protein transport;7.40974123426207e-38!GO:0006259;DNA metabolic process;9.02598486209213e-38!GO:0033036;macromolecule localization;1.27672148805963e-37!GO:0006397;mRNA processing;7.20575637494462e-37!GO:0009059;macromolecule biosynthetic process;7.54703827177477e-37!GO:0009058;biosynthetic process;8.86133621918313e-37!GO:0044249;cellular biosynthetic process;5.90950642186685e-36!GO:0007049;cell cycle;1.41090892612426e-35!GO:0046907;intracellular transport;1.13757259753696e-34!GO:0008104;protein localization;3.24825002110551e-34!GO:0045184;establishment of protein localization;7.96032331956278e-34!GO:0065003;macromolecular complex assembly;1.52592286259902e-30!GO:0005740;mitochondrial envelope;2.09206866357682e-29!GO:0005654;nucleoplasm;2.9313755523858e-29!GO:0000278;mitotic cell cycle;8.59876410837535e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.11295836284316e-28!GO:0005681;spliceosome;2.26681357684535e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.5236649915887e-28!GO:0019866;organelle inner membrane;4.2164065308423e-28!GO:0022607;cellular component assembly;5.46744409046709e-28!GO:0031966;mitochondrial membrane;9.0893103904712e-28!GO:0006886;intracellular protein transport;2.24544145253074e-27!GO:0022402;cell cycle process;6.38515792598468e-27!GO:0005743;mitochondrial inner membrane;9.35931445542898e-26!GO:0006974;response to DNA damage stimulus;2.83244095795166e-24!GO:0003676;nucleic acid binding;2.37904517605146e-23!GO:0006119;oxidative phosphorylation;3.43411016370498e-23!GO:0044455;mitochondrial membrane part;4.12966880354094e-23!GO:0022403;cell cycle phase;5.56062371808016e-23!GO:0044451;nucleoplasm part;5.56062371808016e-23!GO:0000166;nucleotide binding;6.13267554572068e-23!GO:0044445;cytosolic part;6.13267554572068e-23!GO:0005694;chromosome;1.43175027679966e-22!GO:0051641;cellular localization;1.54274689924474e-22!GO:0000087;M phase of mitotic cell cycle;1.87691323173929e-22!GO:0051649;establishment of cellular localization;2.05625246319404e-22!GO:0006457;protein folding;3.05856331646662e-22!GO:0007067;mitosis;4.43448283212984e-22!GO:0006281;DNA repair;1.97096143861765e-21!GO:0015934;large ribosomal subunit;2.9219482587043e-21!GO:0051301;cell division;4.73415272041657e-21!GO:0017111;nucleoside-triphosphatase activity;6.10060521141446e-21!GO:0016462;pyrophosphatase activity;9.78354253755186e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.43949597098915e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;2.0838991548921e-20!GO:0044427;chromosomal part;4.47186976013254e-20!GO:0015935;small ribosomal subunit;6.56098937580275e-20!GO:0006260;DNA replication;1.32021293854185e-18!GO:0005730;nucleolus;1.87333918181167e-18!GO:0000279;M phase;2.03844009309691e-18!GO:0005746;mitochondrial respiratory chain;2.0696850014594e-18!GO:0031980;mitochondrial lumen;2.255564441596e-18!GO:0005759;mitochondrial matrix;2.255564441596e-18!GO:0012505;endomembrane system;5.63720998687222e-18!GO:0009719;response to endogenous stimulus;2.10592724557729e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.71804498964241e-17!GO:0016070;RNA metabolic process;2.80467549208835e-17!GO:0000502;proteasome complex (sensu Eukaryota);4.34858413148639e-17!GO:0048770;pigment granule;5.16091301279871e-17!GO:0042470;melanosome;5.16091301279871e-17!GO:0022618;protein-RNA complex assembly;1.3674022794502e-16!GO:0005761;mitochondrial ribosome;2.86818415062458e-16!GO:0000313;organellar ribosome;2.86818415062458e-16!GO:0050136;NADH dehydrogenase (quinone) activity;2.99721762282297e-16!GO:0003954;NADH dehydrogenase activity;2.99721762282297e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.99721762282297e-16!GO:0032553;ribonucleotide binding;5.23028749226159e-16!GO:0032555;purine ribonucleotide binding;5.23028749226159e-16!GO:0006512;ubiquitin cycle;7.57366168358665e-16!GO:0005783;endoplasmic reticulum;1.18189227844583e-15!GO:0016874;ligase activity;1.40429186630777e-15!GO:0017076;purine nucleotide binding;2.01030598625981e-15!GO:0051186;cofactor metabolic process;5.5395274329465e-15!GO:0051082;unfolded protein binding;5.69305409479941e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.40843921238834e-14!GO:0051276;chromosome organization and biogenesis;2.0792551486509e-14!GO:0030964;NADH dehydrogenase complex (quinone);2.3400105547976e-14!GO:0045271;respiratory chain complex I;2.3400105547976e-14!GO:0005747;mitochondrial respiratory chain complex I;2.3400105547976e-14!GO:0005524;ATP binding;2.84400408000975e-14!GO:0008135;translation factor activity, nucleic acid binding;2.93831187557178e-14!GO:0008134;transcription factor binding;2.93831187557178e-14!GO:0042775;organelle ATP synthesis coupled electron transport;3.18358743410504e-14!GO:0042773;ATP synthesis coupled electron transport;3.18358743410504e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;3.97625159455132e-14!GO:0000375;RNA splicing, via transesterification reactions;3.97625159455132e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.97625159455132e-14!GO:0044265;cellular macromolecule catabolic process;4.55920684855704e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.18322966465508e-14!GO:0044432;endoplasmic reticulum part;7.481037948633e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.50318731896923e-14!GO:0032559;adenyl ribonucleotide binding;8.26280987032784e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;9.74710743392224e-14!GO:0006605;protein targeting;1.10294548147854e-13!GO:0019941;modification-dependent protein catabolic process;1.4644913784752e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.4644913784752e-13!GO:0006511;ubiquitin-dependent protein catabolic process;2.38349503917462e-13!GO:0044257;cellular protein catabolic process;2.4718604469878e-13!GO:0030554;adenyl nucleotide binding;4.5772842636466e-13!GO:0044453;nuclear membrane part;5.6643016989444e-13!GO:0051726;regulation of cell cycle;5.87765563876493e-13!GO:0000074;regulation of progression through cell cycle;6.51154600376882e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.06808521035911e-13!GO:0043285;biopolymer catabolic process;1.07586651739163e-12!GO:0042254;ribosome biogenesis and assembly;1.13867779960015e-12!GO:0031965;nuclear membrane;1.27972309305433e-12!GO:0042623;ATPase activity, coupled;3.22735600640721e-12!GO:0015630;microtubule cytoskeleton;3.73591605441811e-12!GO:0005635;nuclear envelope;4.0838999828439e-12!GO:0009057;macromolecule catabolic process;5.12280059992039e-12!GO:0016887;ATPase activity;5.74175342971017e-12!GO:0005794;Golgi apparatus;9.15123081029611e-12!GO:0016604;nuclear body;1.19686830250658e-11!GO:0044248;cellular catabolic process;1.5105795924108e-11!GO:0006732;coenzyme metabolic process;1.57262763111082e-11!GO:0009055;electron carrier activity;3.04346623233507e-11!GO:0009259;ribonucleotide metabolic process;3.21852166573028e-11!GO:0030163;protein catabolic process;3.34090640316898e-11!GO:0048193;Golgi vesicle transport;3.51517367507335e-11!GO:0043412;biopolymer modification;5.71001445228089e-11!GO:0000775;chromosome, pericentric region;1.04606253679723e-10!GO:0006163;purine nucleotide metabolic process;1.58912670498291e-10!GO:0005793;ER-Golgi intermediate compartment;1.6299670206724e-10!GO:0003743;translation initiation factor activity;1.87083143834491e-10!GO:0016192;vesicle-mediated transport;2.03704254446989e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;2.84133552997779e-10!GO:0006413;translational initiation;2.92271983537355e-10!GO:0005643;nuclear pore;4.157790259837e-10!GO:0009150;purine ribonucleotide metabolic process;6.06452426816141e-10!GO:0009260;ribonucleotide biosynthetic process;7.34516847446945e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;7.54272090281237e-10!GO:0006323;DNA packaging;8.20415388530982e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.64639171835894e-10!GO:0043566;structure-specific DNA binding;1.04959259732903e-09!GO:0006164;purine nucleotide biosynthetic process;1.05367273656025e-09!GO:0006464;protein modification process;1.06441169082298e-09!GO:0006446;regulation of translational initiation;1.16385649155853e-09!GO:0065002;intracellular protein transport across a membrane;1.48327916104928e-09!GO:0006261;DNA-dependent DNA replication;1.63087783734862e-09!GO:0003697;single-stranded DNA binding;1.64084856277867e-09!GO:0009199;ribonucleoside triphosphate metabolic process;1.9501258039351e-09!GO:0005819;spindle;1.9588888976392e-09!GO:0008639;small protein conjugating enzyme activity;2.22901249960203e-09!GO:0016607;nuclear speck;2.42678815230121e-09!GO:0009141;nucleoside triphosphate metabolic process;2.42994788503089e-09!GO:0005789;endoplasmic reticulum membrane;2.44394073692378e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.86712072562037e-09!GO:0006399;tRNA metabolic process;4.20261350332091e-09!GO:0004842;ubiquitin-protein ligase activity;4.20261350332091e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.24635774512711e-09!GO:0009144;purine nucleoside triphosphate metabolic process;4.24635774512711e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.43788033262731e-09!GO:0006913;nucleocytoplasmic transport;4.55618502047801e-09!GO:0008565;protein transporter activity;5.17519282887718e-09!GO:0006461;protein complex assembly;5.46686159868132e-09!GO:0000785;chromatin;5.84532041240685e-09!GO:0051329;interphase of mitotic cell cycle;6.45153446481622e-09!GO:0004386;helicase activity;6.70394515790197e-09!GO:0051325;interphase;7.2271753814649e-09!GO:0030532;small nuclear ribonucleoprotein complex;7.48322280961753e-09!GO:0050657;nucleic acid transport;7.48322280961753e-09!GO:0051236;establishment of RNA localization;7.48322280961753e-09!GO:0050658;RNA transport;7.48322280961753e-09!GO:0003712;transcription cofactor activity;7.55342627198357e-09!GO:0006364;rRNA processing;7.88476875121102e-09!GO:0051169;nuclear transport;8.44557317358596e-09!GO:0006403;RNA localization;8.51874845047511e-09!GO:0019787;small conjugating protein ligase activity;9.24896331995052e-09!GO:0009060;aerobic respiration;1.11295713707596e-08!GO:0046930;pore complex;1.15228541374127e-08!GO:0046034;ATP metabolic process;1.36477939324304e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.42773288370351e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.08568038694801e-08!GO:0065004;protein-DNA complex assembly;2.11083205706669e-08!GO:0016072;rRNA metabolic process;2.11083205706669e-08!GO:0012501;programmed cell death;2.17114175957474e-08!GO:0015986;ATP synthesis coupled proton transport;2.48357244624578e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.48357244624578e-08!GO:0005768;endosome;2.85424241294507e-08!GO:0009142;nucleoside triphosphate biosynthetic process;3.06418703188295e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.06418703188295e-08!GO:0015078;hydrogen ion transmembrane transporter activity;3.07418916882214e-08!GO:0043687;post-translational protein modification;3.27327301957375e-08!GO:0006915;apoptosis;4.66318674836704e-08!GO:0006333;chromatin assembly or disassembly;4.78071980375656e-08!GO:0048523;negative regulation of cellular process;5.49082272977273e-08!GO:0045333;cellular respiration;6.30123307324314e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;6.79937093676204e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;6.79937093676204e-08!GO:0008026;ATP-dependent helicase activity;7.07971648184982e-08!GO:0050794;regulation of cellular process;8.81281958127126e-08!GO:0019829;cation-transporting ATPase activity;9.68726860150686e-08!GO:0005657;replication fork;9.73061140260407e-08!GO:0016469;proton-transporting two-sector ATPase complex;1.00705596397704e-07!GO:0006366;transcription from RNA polymerase II promoter;1.01572502755902e-07!GO:0000075;cell cycle checkpoint;1.04936237892277e-07!GO:0005667;transcription factor complex;1.38638631942146e-07!GO:0007051;spindle organization and biogenesis;1.60734470818472e-07!GO:0007005;mitochondrion organization and biogenesis;1.842476106785e-07!GO:0017038;protein import;1.92954079359759e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.06238611679158e-07!GO:0004812;aminoacyl-tRNA ligase activity;2.06238611679158e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.06238611679158e-07!GO:0006754;ATP biosynthetic process;2.09145491966429e-07!GO:0006753;nucleoside phosphate metabolic process;2.09145491966429e-07!GO:0051188;cofactor biosynthetic process;2.79888669403034e-07!GO:0016881;acid-amino acid ligase activity;3.23124647875444e-07!GO:0006888;ER to Golgi vesicle-mediated transport;3.3274248043786e-07!GO:0009117;nucleotide metabolic process;3.3274248043786e-07!GO:0006099;tricarboxylic acid cycle;3.34744795320819e-07!GO:0046356;acetyl-CoA catabolic process;3.34744795320819e-07!GO:0008219;cell death;3.45503960312439e-07!GO:0016265;death;3.45503960312439e-07!GO:0043038;amino acid activation;4.11935104060578e-07!GO:0006418;tRNA aminoacylation for protein translation;4.11935104060578e-07!GO:0043039;tRNA aminoacylation;4.11935104060578e-07!GO:0051028;mRNA transport;4.31521376663278e-07!GO:0031324;negative regulation of cellular metabolic process;4.33782975148587e-07!GO:0005839;proteasome core complex (sensu Eukaryota);4.79211870383404e-07!GO:0007010;cytoskeleton organization and biogenesis;5.45018125023222e-07!GO:0032446;protein modification by small protein conjugation;6.1326702979118e-07!GO:0005813;centrosome;6.28692458226994e-07!GO:0048519;negative regulation of biological process;8.67986698915778e-07!GO:0005815;microtubule organizing center;8.91439751569571e-07!GO:0005788;endoplasmic reticulum lumen;9.6162677052551e-07!GO:0008094;DNA-dependent ATPase activity;9.87683809699139e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.02763484466291e-06!GO:0045259;proton-transporting ATP synthase complex;1.03675095730343e-06!GO:0030120;vesicle coat;1.10343690322907e-06!GO:0030662;coated vesicle membrane;1.10343690322907e-06!GO:0016567;protein ubiquitination;1.26530074398757e-06!GO:0003924;GTPase activity;1.26973889112389e-06!GO:0006084;acetyl-CoA metabolic process;1.26973889112389e-06!GO:0016779;nucleotidyltransferase activity;1.37978031747178e-06!GO:0000245;spliceosome assembly;1.37978031747178e-06!GO:0006334;nucleosome assembly;1.43821589504675e-06!GO:0051187;cofactor catabolic process;1.48957724029065e-06!GO:0016568;chromatin modification;1.60144448786674e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.63401515394459e-06!GO:0048475;coated membrane;2.16452795201926e-06!GO:0030117;membrane coat;2.16452795201926e-06!GO:0008092;cytoskeletal protein binding;2.43933693638041e-06!GO:0009109;coenzyme catabolic process;3.06427540306102e-06!GO:0009108;coenzyme biosynthetic process;3.58152974673311e-06!GO:0031497;chromatin assembly;3.62693395596891e-06!GO:0016491;oxidoreductase activity;3.81419889875404e-06!GO:0006752;group transfer coenzyme metabolic process;3.93490584286155e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.11507790993486e-06!GO:0004298;threonine endopeptidase activity;4.36780562372431e-06!GO:0009892;negative regulation of metabolic process;4.71679317875548e-06!GO:0005762;mitochondrial large ribosomal subunit;4.97931526564986e-06!GO:0000315;organellar large ribosomal subunit;4.97931526564986e-06!GO:0000151;ubiquitin ligase complex;5.2414460935449e-06!GO:0043623;cellular protein complex assembly;5.2414460935449e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;5.51058336152899e-06!GO:0051789;response to protein stimulus;5.9265561036941e-06!GO:0006986;response to unfolded protein;5.9265561036941e-06!GO:0050789;regulation of biological process;6.15572655245791e-06!GO:0009056;catabolic process;6.91266332793299e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.01259247213889e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.79397355896503e-06!GO:0016859;cis-trans isomerase activity;7.81209464716794e-06!GO:0000776;kinetochore;7.88628196619886e-06!GO:0045786;negative regulation of progression through cell cycle;8.9258757998196e-06!GO:0051427;hormone receptor binding;9.13008355350104e-06!GO:0006613;cotranslational protein targeting to membrane;1.02076782756428e-05!GO:0031252;leading edge;1.09541463601285e-05!GO:0016564;transcription repressor activity;1.61313702928435e-05!GO:0016787;hydrolase activity;1.70841342930629e-05!GO:0016740;transferase activity;2.00358190189455e-05!GO:0035257;nuclear hormone receptor binding;2.09876998235154e-05!GO:0044431;Golgi apparatus part;2.21821656405754e-05!GO:0019899;enzyme binding;2.28396037628463e-05!GO:0003724;RNA helicase activity;2.58714975610775e-05!GO:0003899;DNA-directed RNA polymerase activity;2.76477485458999e-05!GO:0051246;regulation of protein metabolic process;3.00910307310193e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.0222540041415e-05!GO:0044440;endosomal part;3.32108507976019e-05!GO:0010008;endosome membrane;3.32108507976019e-05!GO:0016853;isomerase activity;3.55143093802759e-05!GO:0006302;double-strand break repair;3.59080472235453e-05!GO:0000314;organellar small ribosomal subunit;4.00166667288805e-05!GO:0005763;mitochondrial small ribosomal subunit;4.00166667288805e-05!GO:0007059;chromosome segregation;4.24927899649949e-05!GO:0030867;rough endoplasmic reticulum membrane;4.60319361061417e-05!GO:0005798;Golgi-associated vesicle;4.67009491327354e-05!GO:0016363;nuclear matrix;4.72310056481863e-05!GO:0003714;transcription corepressor activity;4.76039174746777e-05!GO:0006091;generation of precursor metabolites and energy;4.84155407566188e-05!GO:0005874;microtubule;5.23221491371814e-05!GO:0003684;damaged DNA binding;5.72208291777162e-05!GO:0005769;early endosome;6.56760217128978e-05!GO:0006793;phosphorus metabolic process;7.09719979438003e-05!GO:0006796;phosphate metabolic process;7.09719979438003e-05!GO:0043067;regulation of programmed cell death;7.45886123221128e-05!GO:0016023;cytoplasmic membrane-bound vesicle;7.56242276151447e-05!GO:0003690;double-stranded DNA binding;7.98597321251614e-05!GO:0042981;regulation of apoptosis;8.73783142836046e-05!GO:0005525;GTP binding;8.92407402102151e-05!GO:0016563;transcription activator activity;9.49859280486693e-05!GO:0031988;membrane-bound vesicle;9.68931537423079e-05!GO:0016481;negative regulation of transcription;0.00011049952167784!GO:0051170;nuclear import;0.000126226326207261!GO:0007088;regulation of mitosis;0.000128224291467526!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000136011568330806!GO:0043021;ribonucleoprotein binding;0.000140668809700974!GO:0008022;protein C-terminus binding;0.000141479266752444!GO:0009165;nucleotide biosynthetic process;0.000145929838746801!GO:0045454;cell redox homeostasis;0.000153945286071866!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000154669526465597!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000157613961366297!GO:0003729;mRNA binding;0.00016312112829735!GO:0006606;protein import into nucleus;0.000165002787309049!GO:0007093;mitotic cell cycle checkpoint;0.000167221581892984!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000174163795336282!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000188013922253376!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000207031365705224!GO:0006839;mitochondrial transport;0.00021883121272098!GO:0006612;protein targeting to membrane;0.000253742218494842!GO:0003682;chromatin binding;0.000263334064859551!GO:0000082;G1/S transition of mitotic cell cycle;0.000264534854105845!GO:0003713;transcription coactivator activity;0.000265522339303555!GO:0019222;regulation of metabolic process;0.000274665627765228!GO:0051168;nuclear export;0.000314038315559451!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000321294127732542!GO:0043681;protein import into mitochondrion;0.00034007708711009!GO:0016310;phosphorylation;0.000345421513851081!GO:0006916;anti-apoptosis;0.000360221581640681!GO:0051052;regulation of DNA metabolic process;0.000371997391698377!GO:0031968;organelle outer membrane;0.000375186144877553!GO:0006310;DNA recombination;0.000380850643065816!GO:0008361;regulation of cell size;0.000387070523049573!GO:0031982;vesicle;0.000388265848077737!GO:0031410;cytoplasmic vesicle;0.000388660336989669!GO:0016049;cell growth;0.00040217590114137!GO:0005885;Arp2/3 protein complex;0.000404897294326762!GO:0008186;RNA-dependent ATPase activity;0.000435251234032882!GO:0043069;negative regulation of programmed cell death;0.000443205455899099!GO:0005770;late endosome;0.000486367281462536!GO:0031072;heat shock protein binding;0.000493238686807934!GO:0000139;Golgi membrane;0.000502983560350672!GO:0042802;identical protein binding;0.000524509775909202!GO:0005856;cytoskeleton;0.000528277723156098!GO:0033116;ER-Golgi intermediate compartment membrane;0.000531460327509774!GO:0007052;mitotic spindle organization and biogenesis;0.000535678233715416!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000562247208627712!GO:0019867;outer membrane;0.000574878994200994!GO:0005905;coated pit;0.000591958815876211!GO:0008654;phospholipid biosynthetic process;0.000648511795156587!GO:0005048;signal sequence binding;0.000660340667524019!GO:0030036;actin cytoskeleton organization and biogenesis;0.000696036553564587!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000720839235344915!GO:0043284;biopolymer biosynthetic process;0.000735117888273197!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000759312730933578!GO:0043596;nuclear replication fork;0.000774580120273786!GO:0004576;oligosaccharyl transferase activity;0.000778607949577759!GO:0006383;transcription from RNA polymerase III promoter;0.0007916057203837!GO:0005791;rough endoplasmic reticulum;0.000801590597575185!GO:0030663;COPI coated vesicle membrane;0.000801590597575185!GO:0030126;COPI vesicle coat;0.000801590597575185!GO:0001558;regulation of cell growth;0.000814543506784954!GO:0032561;guanyl ribonucleotide binding;0.000822835999448593!GO:0019001;guanyl nucleotide binding;0.000822835999448593!GO:0008250;oligosaccharyl transferase complex;0.000835126739946561!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000852531327674179!GO:0043066;negative regulation of apoptosis;0.000853778456196267!GO:0003678;DNA helicase activity;0.000898212684885503!GO:0065009;regulation of a molecular function;0.000920318018894238!GO:0051252;regulation of RNA metabolic process;0.000949632579971708!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00101898418327126!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00101898418327126!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00101898418327126!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00108523855024904!GO:0000059;protein import into nucleus, docking;0.00111195077314269!GO:0001952;regulation of cell-matrix adhesion;0.00112517423556766!GO:0006414;translational elongation;0.00115000931634331!GO:0019843;rRNA binding;0.00116022143311997!GO:0004004;ATP-dependent RNA helicase activity;0.00116022143311997!GO:0008047;enzyme activator activity;0.00119614946326383!GO:0006626;protein targeting to mitochondrion;0.00123193994356508!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00126947012873006!GO:0005773;vacuole;0.00128738318340357!GO:0051920;peroxiredoxin activity;0.00136956661342302!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00137697377024929!GO:0005876;spindle microtubule;0.00140333829778816!GO:0000228;nuclear chromosome;0.00148698191328052!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00150286530357985!GO:0006270;DNA replication initiation;0.00152914315510091!GO:0007017;microtubule-based process;0.00152914315510091!GO:0018196;peptidyl-asparagine modification;0.00152914315510091!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00152914315510091!GO:0005741;mitochondrial outer membrane;0.00156521554836696!GO:0046474;glycerophospholipid biosynthetic process;0.00160940693972213!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00163828948476597!GO:0015399;primary active transmembrane transporter activity;0.00163828948476597!GO:0005684;U2-dependent spliceosome;0.00173950592438956!GO:0030029;actin filament-based process;0.00175742426959701!GO:0007006;mitochondrial membrane organization and biogenesis;0.00176610567966223!GO:0003779;actin binding;0.00189670928916708!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00197393853718872!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00197393853718872!GO:0022890;inorganic cation transmembrane transporter activity;0.00198715977801478!GO:0006284;base-excision repair;0.00201548815234027!GO:0030176;integral to endoplasmic reticulum membrane;0.00205525392889501!GO:0030137;COPI-coated vesicle;0.00205678513161032!GO:0031124;mRNA 3'-end processing;0.00223054862810701!GO:0005637;nuclear inner membrane;0.0022335489889296!GO:0048500;signal recognition particle;0.00234478677506655!GO:0008033;tRNA processing;0.00247810216350154!GO:0006950;response to stress;0.00249624773105437!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00251245326226572!GO:0008168;methyltransferase activity;0.00253123379780755!GO:0030132;clathrin coat of coated pit;0.00266384913992217!GO:0001726;ruffle;0.00271965942203137!GO:0015992;proton transport;0.00279904483164595!GO:0048522;positive regulation of cellular process;0.00281251646630368!GO:0032508;DNA duplex unwinding;0.00300855229271615!GO:0032392;DNA geometric change;0.00300855229271615!GO:0065007;biological regulation;0.0030628181914682!GO:0043601;nuclear replisome;0.00307401497332481!GO:0030894;replisome;0.00307401497332481!GO:0016741;transferase activity, transferring one-carbon groups;0.00310564528712304!GO:0006275;regulation of DNA replication;0.00310564528712304!GO:0006818;hydrogen transport;0.00310739521052913!GO:0008312;7S RNA binding;0.00314082483243639!GO:0055003;cardiac myofibril assembly;0.00314082483243639!GO:0055013;cardiac muscle cell development;0.00314082483243639!GO:0008180;signalosome;0.00325858442848777!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00331834337992653!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00335973737533488!GO:0015002;heme-copper terminal oxidase activity;0.00335973737533488!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00335973737533488!GO:0004129;cytochrome-c oxidase activity;0.00335973737533488!GO:0003711;transcription elongation regulator activity;0.00340709872728146!GO:0000792;heterochromatin;0.00378047502161692!GO:0000070;mitotic sister chromatid segregation;0.00387509959760544!GO:0046483;heterocycle metabolic process;0.00394444339745919!GO:0000786;nucleosome;0.00401314576056188!GO:0008139;nuclear localization sequence binding;0.00404174237782703!GO:0051087;chaperone binding;0.00404174237782703!GO:0030521;androgen receptor signaling pathway;0.00411711303294908!GO:0019206;nucleoside kinase activity;0.00414770132751168!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00423214179303253!GO:0051540;metal cluster binding;0.00423214179303253!GO:0051536;iron-sulfur cluster binding;0.00423214179303253!GO:0030133;transport vesicle;0.00426006692682504!GO:0006268;DNA unwinding during replication;0.00428937271960029!GO:0000922;spindle pole;0.00431569744142409!GO:0035258;steroid hormone receptor binding;0.00432910925819369!GO:0000819;sister chromatid segregation;0.00464140152907859!GO:0017166;vinculin binding;0.00488676973069018!GO:0046489;phosphoinositide biosynthetic process;0.00509188634234207!GO:0044452;nucleolar part;0.00510824580728589!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00527320763972789!GO:0045047;protein targeting to ER;0.00527320763972789!GO:0000323;lytic vacuole;0.00529079686440702!GO:0005764;lysosome;0.00529079686440702!GO:0003746;translation elongation factor activity;0.00560948073351785!GO:0006891;intra-Golgi vesicle-mediated transport;0.00571454237908912!GO:0007034;vacuolar transport;0.00571454237908912!GO:0000910;cytokinesis;0.00588719500709603!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00592975661577165!GO:0005096;GTPase activator activity;0.00596096278042726!GO:0030027;lamellipodium;0.00600212618580255!GO:0045892;negative regulation of transcription, DNA-dependent;0.00602990898807449!GO:0015631;tubulin binding;0.00603070255003456!GO:0006595;polyamine metabolic process;0.00606392868744888!GO:0005869;dynactin complex;0.00612005536369353!GO:0007346;regulation of progression through mitotic cell cycle;0.00615923824233328!GO:0040008;regulation of growth;0.00615923824233328!GO:0031323;regulation of cellular metabolic process;0.00618082340732292!GO:0006352;transcription initiation;0.00630170624497515!GO:0006289;nucleotide-excision repair;0.00647555705080626!GO:0031901;early endosome membrane;0.00675089911543686!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00680774522996308!GO:0007050;cell cycle arrest;0.00689606760252957!GO:0031570;DNA integrity checkpoint;0.00698196965103898!GO:0016044;membrane organization and biogenesis;0.00723057390438479!GO:0008286;insulin receptor signaling pathway;0.00737276335750123!GO:0030880;RNA polymerase complex;0.00755456721030458!GO:0048487;beta-tubulin binding;0.0075699951315805!GO:0016126;sterol biosynthetic process;0.00784615737556339!GO:0009116;nucleoside metabolic process;0.00822771830460176!GO:0016272;prefoldin complex;0.00822786228400059!GO:0000725;recombinational repair;0.00826163840075764!GO:0000724;double-strand break repair via homologous recombination;0.00826163840075764!GO:0042770;DNA damage response, signal transduction;0.00827516133139079!GO:0006220;pyrimidine nucleotide metabolic process;0.00833109304979521!GO:0048471;perinuclear region of cytoplasm;0.00843306359738993!GO:0006402;mRNA catabolic process;0.00854853013485761!GO:0044262;cellular carbohydrate metabolic process;0.00854853013485761!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00886044352036784!GO:0045792;negative regulation of cell size;0.00939499589282607!GO:0009112;nucleobase metabolic process;0.00968392498099553!GO:0016408;C-acyltransferase activity;0.00994078800408139!GO:0043488;regulation of mRNA stability;0.0100973426211305!GO:0043487;regulation of RNA stability;0.0100973426211305!GO:0000339;RNA cap binding;0.0102242371789741!GO:0004527;exonuclease activity;0.0102573406233846!GO:0030118;clathrin coat;0.0106350287190985!GO:0042393;histone binding;0.0106888892261588!GO:0050790;regulation of catalytic activity;0.0108747635434116!GO:0051287;NAD binding;0.0109101632173921!GO:0006405;RNA export from nucleus;0.0109101632173921!GO:0006378;mRNA polyadenylation;0.0109510339682407!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0109581606527003!GO:0030308;negative regulation of cell growth;0.0109581606527003!GO:0051539;4 iron, 4 sulfur cluster binding;0.010992568022188!GO:0005832;chaperonin-containing T-complex;0.0115425989799261!GO:0005862;muscle thin filament tropomyosin;0.0118350588113513!GO:0006509;membrane protein ectodomain proteolysis;0.0120431930973794!GO:0033619;membrane protein proteolysis;0.0120431930973794!GO:0033673;negative regulation of kinase activity;0.0123120675495665!GO:0006469;negative regulation of protein kinase activity;0.0123120675495665!GO:0030658;transport vesicle membrane;0.0126253412680473!GO:0043492;ATPase activity, coupled to movement of substances;0.01281432326162!GO:0008632;apoptotic program;0.0129700502326637!GO:0006611;protein export from nucleus;0.013440261866607!GO:0022408;negative regulation of cell-cell adhesion;0.0134625592139115!GO:0006695;cholesterol biosynthetic process;0.0136553471341652!GO:0051348;negative regulation of transferase activity;0.014239048180952!GO:0006338;chromatin remodeling;0.014490349897168!GO:0016584;nucleosome positioning;0.0145262881720051!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.015064716432734!GO:0030032;lamellipodium biogenesis;0.0150966015732787!GO:0016197;endosome transport;0.0151280364366772!GO:0006144;purine base metabolic process;0.0151552891823173!GO:0031123;RNA 3'-end processing;0.0153152690050239!GO:0004003;ATP-dependent DNA helicase activity;0.0153944474826119!GO:0006007;glucose catabolic process;0.0154357810945124!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0156266142673269!GO:0000428;DNA-directed RNA polymerase complex;0.0156266142673269!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0163308718817517!GO:0032259;methylation;0.0166895484282553!GO:0015629;actin cytoskeleton;0.0170497542363584!GO:0006740;NADPH regeneration;0.0175042968517002!GO:0006098;pentose-phosphate shunt;0.0175042968517002!GO:0007041;lysosomal transport;0.0179964195190758!GO:0005663;DNA replication factor C complex;0.0180981759675235!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0185993626263233!GO:0007264;small GTPase mediated signal transduction;0.018603501443547!GO:0006401;RNA catabolic process;0.0193329847153752!GO:0006354;RNA elongation;0.0195297389520224!GO:0006376;mRNA splice site selection;0.0202603122607012!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0202603122607012!GO:0000287;magnesium ion binding;0.0202721736601935!GO:0043022;ribosome binding;0.0203655550378862!GO:0000084;S phase of mitotic cell cycle;0.0205444852927164!GO:0001725;stress fiber;0.0212556698470232!GO:0032432;actin filament bundle;0.0212556698470232!GO:0000209;protein polyubiquitination;0.0212935860200716!GO:0031529;ruffle organization and biogenesis;0.0212935860200716!GO:0030496;midbody;0.021711578446798!GO:0001953;negative regulation of cell-matrix adhesion;0.021711578446798!GO:0006350;transcription;0.0219364114926682!GO:0050681;androgen receptor binding;0.0222176649156093!GO:0000178;exosome (RNase complex);0.0226384208937396!GO:0046966;thyroid hormone receptor binding;0.0226653663089712!GO:0000077;DNA damage checkpoint;0.0227506550405978!GO:0045941;positive regulation of transcription;0.0228407397962425!GO:0043433;negative regulation of transcription factor activity;0.022958673807655!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0230036470051649!GO:0046467;membrane lipid biosynthetic process;0.023091912737104!GO:0007021;tubulin folding;0.0233670805846545!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0233670805846545!GO:0008601;protein phosphatase type 2A regulator activity;0.0236900548396957!GO:0005652;nuclear lamina;0.0242401292404066!GO:0031589;cell-substrate adhesion;0.0244750070784293!GO:0007243;protein kinase cascade;0.0249589018390148!GO:0043624;cellular protein complex disassembly;0.0251284388805213!GO:0045936;negative regulation of phosphate metabolic process;0.0252234813331884!GO:0043414;biopolymer methylation;0.0256276357609608!GO:0030119;AP-type membrane coat adaptor complex;0.0257272006651627!GO:0007160;cell-matrix adhesion;0.0258360286912342!GO:0030134;ER to Golgi transport vesicle;0.0260310299868384!GO:0044454;nuclear chromosome part;0.0260379195128605!GO:0005811;lipid particle;0.0261199713558059!GO:0032200;telomere organization and biogenesis;0.0264412002245169!GO:0000723;telomere maintenance;0.0264412002245169!GO:0045926;negative regulation of growth;0.0265901395513052!GO:0040029;regulation of gene expression, epigenetic;0.0265901395513052!GO:0033559;unsaturated fatty acid metabolic process;0.0265901395513052!GO:0006636;unsaturated fatty acid biosynthetic process;0.0265901395513052!GO:0051053;negative regulation of DNA metabolic process;0.0266942973961641!GO:0032984;macromolecular complex disassembly;0.0268661219329276!GO:0045098;type III intermediate filament;0.0273470887735857!GO:0000152;nuclear ubiquitin ligase complex;0.0274342381368975!GO:0003923;GPI-anchor transamidase activity;0.0276012451141061!GO:0016255;attachment of GPI anchor to protein;0.0276012451141061!GO:0042765;GPI-anchor transamidase complex;0.0276012451141061!GO:0030660;Golgi-associated vesicle membrane;0.0278118267825016!GO:0006497;protein amino acid lipidation;0.0283657475364548!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0286655403363957!GO:0005784;translocon complex;0.0289797566955494!GO:0030127;COPII vesicle coat;0.029377041992853!GO:0012507;ER to Golgi transport vesicle membrane;0.029377041992853!GO:0003756;protein disulfide isomerase activity;0.0297081466265854!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0297081466265854!GO:0009262;deoxyribonucleotide metabolic process;0.0302287331461372!GO:0000159;protein phosphatase type 2A complex;0.0307144081763978!GO:0006506;GPI anchor biosynthetic process;0.0311900264363198!GO:0016251;general RNA polymerase II transcription factor activity;0.0315280811604705!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0317300643069044!GO:0031577;spindle checkpoint;0.031805825474937!GO:0043130;ubiquitin binding;0.031805825474937!GO:0032182;small conjugating protein binding;0.031805825474937!GO:0008287;protein serine/threonine phosphatase complex;0.0322949643292273!GO:0006266;DNA ligation;0.03238568241755!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0324065844515921!GO:0008243;plasminogen activator activity;0.0328549243403121!GO:0008538;proteasome activator activity;0.0338414372217452!GO:0051059;NF-kappaB binding;0.0340288880931717!GO:0051320;S phase;0.0342960115956922!GO:0004518;nuclease activity;0.03458061194273!GO:0019752;carboxylic acid metabolic process;0.0353465561473418!GO:0014706;striated muscle development;0.0358545232682509!GO:0031371;ubiquitin conjugating enzyme complex;0.035948684705202!GO:0005758;mitochondrial intermembrane space;0.0361794595658513!GO:0008629;induction of apoptosis by intracellular signals;0.0363407614795169!GO:0000781;chromosome, telomeric region;0.0366908183720439!GO:0030508;thiol-disulfide exchange intermediate activity;0.0366908183720439!GO:0006505;GPI anchor metabolic process;0.0370801721211961!GO:0005680;anaphase-promoting complex;0.0376378780842569!GO:0016791;phosphoric monoester hydrolase activity;0.0377261872739756!GO:0004523;ribonuclease H activity;0.0377261872739756!GO:0009303;rRNA transcription;0.0380366498559849!GO:0044430;cytoskeletal part;0.0383005981541257!GO:0004674;protein serine/threonine kinase activity;0.0385858114472396!GO:0051098;regulation of binding;0.0390143969086072!GO:0030131;clathrin adaptor complex;0.0390610805586914!GO:0006082;organic acid metabolic process;0.0392926484470603!GO:0030911;TPR domain binding;0.0393187719973133!GO:0047485;protein N-terminus binding;0.0395503817756732!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0395503817756732!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0401553097815702!GO:0000726;non-recombinational repair;0.0405535445955103!GO:0043241;protein complex disassembly;0.0420789145686662!GO:0051128;regulation of cellular component organization and biogenesis;0.0422455410776813!GO:0006650;glycerophospholipid metabolic process;0.0422455410776813!GO:0007517;muscle development;0.0427404297207805!GO:0005669;transcription factor TFIID complex;0.0434837710837667!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.043686980362418!GO:0045045;secretory pathway;0.0437504746659429!GO:0030125;clathrin vesicle coat;0.0439120749448279!GO:0030665;clathrin coated vesicle membrane;0.0439120749448279!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0439309942824425!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0442995942717258!GO:0043065;positive regulation of apoptosis;0.0443192592985016!GO:0000793;condensed chromosome;0.0448290165198613!GO:0031625;ubiquitin protein ligase binding;0.0448820099170017!GO:0045893;positive regulation of transcription, DNA-dependent;0.0449108084915484!GO:0044433;cytoplasmic vesicle part;0.0449648411423212!GO:0046128;purine ribonucleoside metabolic process;0.0451773496489877!GO:0042278;purine nucleoside metabolic process;0.0451773496489877!GO:0000086;G2/M transition of mitotic cell cycle;0.0451773496489877!GO:0000049;tRNA binding;0.0451773496489877!GO:0030659;cytoplasmic vesicle membrane;0.0453571280450658!GO:0051318;G1 phase;0.0457863554234674!GO:0031543;peptidyl-proline dioxygenase activity;0.045921095672362!GO:0007162;negative regulation of cell adhesion;0.045921095672362!GO:0003988;acetyl-CoA C-acyltransferase activity;0.045921095672362!GO:0005521;lamin binding;0.0465877728398076!GO:0030518;steroid hormone receptor signaling pathway;0.0468500799840749!GO:0005744;mitochondrial inner membrane presequence translocase complex;0.0474711589426113!GO:0031902;late endosome membrane;0.0484289626165493!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0491551213461402!GO:0006541;glutamine metabolic process;0.0494633646364134!GO:0008408;3'-5' exonuclease activity;0.0494633646364134!GO:0007040;lysosome organization and biogenesis;0.0495428500574384!GO:0006221;pyrimidine nucleotide biosynthetic process;0.049551760056577!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0499098032040905
|sample_id=10568
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=skeletal muscle
|top_motifs=POU3F1..4:2.93430932523;NKX2-2,8:2.77606262968;AIRE:1.9667992169;UFEwm:1.87935231728;ALX4:1.86161740761;EVI1:1.64707199637;NR3C1:1.51360022332;FOXL1:1.50204136142;FOXD3:1.3639373055;E2F1..5:1.35598756126;RXR{A,B,G}:1.35430374314;T:1.3455089674;GCM1,2:1.3136147292;HSF1,2:1.30359662458;HMGA1,2:1.26307137487;NKX3-1:1.25935636358;FOXM1:1.14624683569;MYB:1.13069478032;ZNF384:1.12577188152;IKZF2:1.11371730798;GZF1:1.08505931199;TEAD1:1.0375812066;TFDP1:0.99283353204;RXRA_VDR{dimer}:0.992607731585;TFAP4:0.978128906066;HES1:0.969380598547;PAX4:0.948165678197;ZIC1..3:0.935893468507;SRF:0.897336413578;PPARG:0.878495944781;POU1F1:0.834165339662;HOX{A4,D4}:0.787454192117;TLX1..3_NFIC{dimer}:0.761193861105;MYOD1:0.714751486574;GFI1:0.690555029209;YY1:0.682550368772;NFY{A,B,C}:0.665182654505;ARID5B:0.663293898922;PAX8:0.66105589257;GFI1B:0.658709712041;NFE2L1:0.633215287884;CDC5L:0.588376285196;NR5A1,2:0.579788998679;PAX6:0.557535318737;MYBL2:0.54298047571;HAND1,2:0.53778367894;SMAD1..7,9:0.488553936655;TP53:0.486075939662;EN1,2:0.473447587809;ZBTB16:0.466900791571;PITX1..3:0.464504238503;AR:0.459417726207;KLF4:0.455574040213;GATA4:0.45150691643;IKZF1:0.450595183076;PAX1,9:0.425973726895;MTE{core}:0.4113916654;MEF2{A,B,C,D}:0.408348292266;PAX3,7:0.40208557553;LHX3,4:0.372189814649;ZNF143:0.36741559147;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.366476656843;NFIX:0.316958258729;LEF1_TCF7_TCF7L1,2:0.309526655775;TOPORS:0.288920295229;GTF2A1,2:0.275171540504;NHLH1,2:0.260755003513;BACH2:0.248962695481;NKX3-2:0.229734615543;TAL1_TCF{3,4,12}:0.223629269294;NR6A1:0.216212810367;HOXA9_MEIS1:0.211744208022;TGIF1:0.176749275852;TBX4,5:0.169148846189;SPZ1:0.149291671197;ESR1:0.140345583605;NR1H4:0.134424807452;MAZ:0.123290413434;FOXA2:0.122415983096;ZNF148:0.114714642342;ZNF238:0.114081385083;TBP:0.11169641059;GLI1..3:0.106506164483;DBP:0.0972369575598;FOXO1,3,4:0.0854451559671;CDX1,2,4:0.0714805794241;EBF1:0.0425052041099;ZBTB6:0.0412114519196;EP300:0.0336661438559;HOX{A5,B5}:0.0273163681739;NANOG{mouse}:0.0255064652086;TFCP2:0.00893494963255;LMO2:0.00846268258905;RUNX1..3:-0.0131138094253;DMAP1_NCOR{1,2}_SMARC:-0.0350592631355;SOX2:-0.0539835495998;NRF1:-0.0557687286615;FOS_FOS{B,L1}_JUN{B,D}:-0.076714156933;HIC1:-0.0858014703068;SOX{8,9,10}:-0.116084455881;NFE2L2:-0.125731134886;POU6F1:-0.127267802718;BPTF:-0.143523784301;FOXP3:-0.148410059921;SOX5:-0.153021287447;ONECUT1,2:-0.169902698907;NFE2:-0.177031260354;STAT5{A,B}:-0.177859823989;ELK1,4_GABP{A,B1}:-0.188517180099;HMX1:-0.190193008456;PRRX1,2:-0.206836652029;NFIL3:-0.212641692588;OCT4_SOX2{dimer}:-0.213001033892;SOX17:-0.223012613404;MTF1:-0.223244793782;ZFP161:-0.229291801668;ALX1:-0.245453338856;MZF1:-0.247881881482;POU2F1..3:-0.253887888394;PDX1:-0.271111531714;RFX1:-0.272783043778;HNF4A_NR2F1,2:-0.282213581715;FOXP1:-0.282302730136;HNF1A:-0.289978873965;GTF2I:-0.317624870597;FOSL2:-0.321273701017;TFAP2{A,C}:-0.321369850505;CUX2:-0.3255797565;NFATC1..3:-0.342372652091;CREB1:-0.370508583621;IRF1,2:-0.371635887882;NKX2-1,4:-0.381503138684;STAT2,4,6:-0.393754471587;ESRRA:-0.408263666446;ATF6:-0.408905265953;HLF:-0.418679583746;TLX2:-0.425198885843;ADNP_IRX_SIX_ZHX:-0.440721518919;PBX1:-0.463160060733;IRF7:-0.468108108306;NKX6-1,2:-0.479589180465;MED-1{core}:-0.485026148046;RBPJ:-0.516104685558;NKX2-3_NKX2-5:-0.529195471797;TFAP2B:-0.529765285952;JUN:-0.54186015866;FOX{D1,D2}:-0.543948687536;ATF5_CREB3:-0.548595346659;RREB1:-0.570415818455;SPIB:-0.577162885074;XCPE1{core}:-0.582336541809;NFKB1_REL_RELA:-0.583335999997;RFX2..5_RFXANK_RFXAP:-0.590122889189;SPI1:-0.599208575051;AHR_ARNT_ARNT2:-0.611535360237;SNAI1..3:-0.614257495431;TEF:-0.654228961989;PAX5:-0.672844405863;MYFfamily:-0.675419014245;ELF1,2,4:-0.67804375724;FOXQ1:-0.680673440357;PRDM1:-0.70189177585;HOX{A6,A7,B6,B7}:-0.720221000729;HIF1A:-0.720442669854;REST:-0.735342322799;FOXN1:-0.736111998717;bHLH_family:-0.740773601234;GATA6:-0.760946243196;ETS1,2:-0.785804410902;FOX{I1,J2}:-0.798557215169;BREu{core}:-0.801945065868;SP1:-0.811394919032;RORA:-0.822885959419;CEBPA,B_DDIT3:-0.838756235061;SREBF1,2:-0.841385046655;ATF4:-0.858286190443;XBP1:-0.861479908903;PATZ1:-0.876736339222;ZEB1:-0.960750920188;HBP1_HMGB_SSRP1_UBTF:-0.985504752625;POU5F1:-1.0096529039;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.03803181779;VSX1,2:-1.07736986397;EGR1..3:-1.08104646118;ATF2:-1.18089888002;ZNF423:-1.18172933215;NANOG:-1.32913164119;STAT1,3:-1.36872504407;MAFB:-1.39634511205;PAX2:-1.42673022857;FOX{F1,F2,J1}:-1.68125969782;CRX:-1.73289097516
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10568-108B1;search_select_hide=table117:FF:10568-108B1
}}
}}

Latest revision as of 14:29, 3 June 2020

Name:mesenchymal stem cell line:Hu5/E18
Species:Human (Homo sapiens)
Library ID:CNhs11718
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskeletal muscle
dev stage42 year old adult
sexfemale
age42
cell typemesenchymal stem cell
cell lineHu5/E18
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005180
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11718 CAGE DRX007935 DRR008807
Accession ID Hg19

Library idBAMCTSS
CNhs11718 DRZ000232 DRZ001617
Accession ID Hg38

Library idBAMCTSS
CNhs11718 DRZ011582 DRZ012967
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0738
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.581
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.845
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.477
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0693
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.151
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.155
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.194
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.265
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.792
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.514
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0522
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.617
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.255
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.146
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.792
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.845
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.731
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.342
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.328
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11718

Jaspar motifP-value
MA0002.20.571
MA0003.10.853
MA0004.10.31
MA0006.10.13
MA0007.10.185
MA0009.10.699
MA0014.10.514
MA0017.10.901
MA0018.20.00325
MA0019.10.212
MA0024.19.82029e-4
MA0025.10.00806
MA0027.10.325
MA0028.10.668
MA0029.10.712
MA0030.15.63929e-5
MA0031.10.0292
MA0035.20.137
MA0038.10.305
MA0039.20.241
MA0040.10.564
MA0041.10.35
MA0042.10.539
MA0043.13.12939e-9
MA0046.10.00802
MA0047.20.0106
MA0048.10.863
MA0050.10.00358
MA0051.10.0207
MA0052.10.995
MA0055.10.792
MA0057.10.658
MA0058.10.239
MA0059.10.355
MA0060.10.00949
MA0061.10.109
MA0062.20.00134
MA0065.20.364
MA0066.10.059
MA0067.10.0366
MA0068.10.761
MA0069.10.355
MA0070.10.408
MA0071.10.889
MA0072.10.785
MA0073.10.644
MA0074.10.943
MA0076.10.12
MA0077.10.253
MA0078.10.76
MA0079.20.0362
MA0080.23.53657e-8
MA0081.10.0207
MA0083.10.132
MA0084.10.0999
MA0087.10.737
MA0088.10.21
MA0090.10.00527
MA0091.10.0063
MA0092.10.305
MA0093.10.24
MA0099.20.316
MA0100.10.125
MA0101.13.2387e-5
MA0102.21.24785e-5
MA0103.10.0263
MA0104.20.488
MA0105.10.111
MA0106.10.105
MA0107.11.98737e-5
MA0108.20.368
MA0111.10.612
MA0112.20.00364
MA0113.10.312
MA0114.10.597
MA0115.10.416
MA0116.10.0236
MA0117.10.522
MA0119.15.98872e-4
MA0122.10.789
MA0124.10.175
MA0125.10.407
MA0131.10.345
MA0135.10.787
MA0136.11.21472e-9
MA0137.22.18131e-4
MA0138.20.98
MA0139.10.656
MA0140.10.785
MA0141.10.726
MA0142.10.109
MA0143.10.967
MA0144.10.148
MA0145.10.213
MA0146.10.557
MA0147.10.82
MA0148.10.0328
MA0149.10.139
MA0150.10.317
MA0152.10.443
MA0153.10.121
MA0154.10.122
MA0155.10.82
MA0156.11.96132e-7
MA0157.10.214
MA0159.10.675
MA0160.10.127
MA0162.10.00428
MA0163.10.00141
MA0164.10.826
MA0258.10.142
MA0259.10.634



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11718

Novel motifP-value
10.0719
100.0667
1000.306
1010.664
1020.707
1030.367
1040.86
1050.0466
1060.485
1070.0318
1080.451
1090.00966
110.353
1100.0454
1110.0528
1120.663
1130.0074
1140.0929
1150.0351
1160.151
1170.114
1180.268
1190.392
120.353
1200.0611
1210.564
1220.0509
1230.166
1240.722
1250.0423
1260.729
1270.67
1280.754
1290.46
130.142
1300.946
1310.629
1320.382
1330.368
1340.787
1350.8
1360.265
1370.362
1380.447
1390.895
140.713
1400.352
1410.81
1420.506
1430.275
1440.83
1450.218
1460.766
1470.417
1480.291
1490.0115
150.335
1500.397
1510.817
1520.81
1530.879
1540.878
1550.354
1560.515
1570.361
1580.327
1590.543
160.0426
1600.167
1610.891
1620.335
1630.129
1640.627
1650.142
1660.646
1670.302
1680.343
1690.0332
170.157
180.408
190.0143
20.923
200.976
210.145
220.445
230.807
240.999
250.478
260.011
270.837
280.749
290.355
30.284
300.318
310.932
327.22934e-4
330.109
340.127
350.945
360.463
370.103
380.924
390.238
40.637
400.0673
410.562
420.929
430.127
440.0759
450.617
460.021
470.315
480.428
490.308
50.612
500.692
510.842
520.947
530.421
540.991
550.439
560.647
570.157
580.527
590.0128
60.284
600.852
610.787
620.798
630.441
640.922
650.916
660.0345
670.831
680.395
690.148
70.734
700.331
710.0352
720.22
730.109
740.65
750.264
760.918
770.0554
780.145
790.0454
80.0695
800.572
810.619
820.657
830.817
840.124
850.602
860.706
870.911
880.68
890.23
90.91
900.217
910.667
920.759
930.826
940.422
950.122
960.361
970.811
980.579
990.00336



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11718


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000034 (stem cell)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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