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{{f5samples
{{f5samples
|id=FF:10686-109F2
|DRA_sample_Accession=CAGE@SAMD00005109
|name=bone marrow stromal cell line:StromaNKtert
|accession_numbers=CAGE;DRX007836;DRR008708;DRZ000133;DRZ001518;DRZ011483;DRZ012868
|sample_id=10686
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002371,UBERON:0001474,UBERON:0002384,UBERON:0007195,UBERON:0000479,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004765,UBERON:0010317,UBERON:0002204,UBERON:0001434,UBERON:0002390,UBERON:0002193,UBERON:0002405
|rna_tube_id=109F2
|rna_box=109
|rna_position=F2
|sample_cell_lot=
|sample_cell_catalog=RCB2350
|sample_company=RIKEN Bioresource centre
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=bone marrow
|sample_donor(cell lot)=
|sample_sex=unknown
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=1.92
|rna_od260/280=2.03
|sample_cell_type=stromal cell
|sample_cell_line=StromaNKtert
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=14.14794
|rna_concentration=0.30102
|sample_note=
|profile_hcage=CNhs11931,LSID835,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423,UBERON:0007195
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0103296
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr5:158526917..158526932,-!p1@EBF1!1.68!112.25!EBF1;;chr1:170632959..170632987,+!p4@PRRX1!1.68!51.12!PRRX1;;chrX:66763856..66763896,+!p1@AR!1.67!64.46!AR;;chr1:170633058..170633084,+!p5@PRRX1!1.61!40.01!PRRX1;;chr1:197886461..197886558,+!p1@LHX9!1.59!37.79!LHX9;;chr16:86600426..86600441,+!p1@FOXC2!1.51!75.57!FOXC2;;chr12:54380404..54380433,+!p3@HOXC10!1.46!27.78!HOXC10;;chr1:170633348..170633399,+!p2@PRRX1!1.41!33.34!PRRX1;;chr5:158526459..158526481,-!p2@EBF1!1.39!31.12!EBF1;;chr1:170632285..170632309,+!p1@PRRX1!1.36!24.45!PRRX1;;chr2:85981073..85981091,+!p5@ATOH8!1.34!21.12!ATOH8;;chr8:49833978..49833996,-!p1@SNAI2!1.33!408.98!SNAI2;;chr1:170633262..170633285,+!p3@PRRX1!1.33!23.34!PRRX1;;chr2:45236540..45236577,-!p1@SIX2!1.30!18.89!SIX2;;chrX:66763914..66763933,+!p3@AR!1.30!18.89!AR;;chr10:63809013..63809041,+!p3@ARID5B!1.27!96.69!ARID5B;;chr2:85981107..85981120,+!p3@ATOH8!1.27!17.78!ATOH8;;chr12:66218598..66218645,+!p2@HMGA2!1.23!73.35!HMGA2;;chrX:66764343..66764362,+!p4@AR!1.22!15.56!AR;;chr8:49833948..49833973,-!p2@SNAI2!1.21!95.58!SNAI2;;chr15:42749722..42749739,-!p2@ZFP106!1.20!26.67!ZFP106;;chr12:54402745..54402788,+!p1@HOXC8!1.19!14.45!HOXC8;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.19!14.45!HOXC5;;chr1:23885981..23886002,-!p1@ID3!1.17!2342.77!ID3;;chr17:46687959..46688007,-!p2@HOXB7!1.17!18.89!HOXB7;;chr2:19558373..19558392,-!p1@OSR1!1.16!36.68!OSR1;;chrX:66763815..66763854,+!p2@AR!1.16!17.78!AR;;chr7:15726243..15726293,-!p2@MEOX2!1.16!13.34!MEOX2;;chr15:67391010..67391046,+!p13@SMAD3!1.16!13.34!SMAD3;;chr12:52445218..52445237,+!p1@NR4A1!1.12!154.48!NR4A1;;chr11:46299199..46299233,+!p1@CREB3L1!1.12!62.24!CREB3L1;;chr20:39946361..39946379,-!p2@ZHX3!1.10!34.45!ZHX3;;chr11:65686802..65686818,+!p6@DRAP1!1.10!20.00!DRAP1;;chr2:200323414..200323455,-!p1@SATB2!1.09!24.45!SATB2;;chr2:200322654..200322707,-!p2@SATB2!1.09!16.67!SATB2;;chr10:63809106..63809127,+!p1@ARID5B!1.08!147.81!ARID5B;;chr16:86600458..86600461,+!p3@FOXC2!1.08!11.11!FOXC2;;chr3:114343768..114343822,-!p1@ZBTB20!1.07!47.79!ZBTB20;;chr11:65686732..65686756,+!p2@DRAP1!1.07!45.57!DRAP1;;chr2:157189180..157189290,-!p1@NR4A2!1.04!52.23!NR4A2;;chr10:131762504..131762555,-!p1@EBF3!1.04!10.00!EBF3;;chr16:86600870..86600921,+!p2@FOXC2!1.04!10.00!FOXC2;;chr3:169381420..169381535,-!p1@MECOM!1.02!11.11!MECOM;;chr12:77459306..77459365,-!p1@E2F7!1.00!115.58!E2F7;;chr10:63809134..63809145,+!p6@ARID5B!1.00!21.12!ARID5B;;chr8:60031619..60031676,-!p1@TOX!1.00!20.00!TOX;;chr17:46687935..46687950,-!p3@HOXB7!1.00!8.89!HOXB7;;chrY:21906594..21906622,-!p1@KDM5D!1.00!8.89!KDM5D;;chr1:119530493..119530572,-!p1@TBX15!1.00!8.89!TBX15;;chr8:67525443..67525459,-!p2@MYBL1!0.99!13.34!MYBL1;;chr6:10412600..10412637,-!p1@TFAP2A!0.98!14.45!TFAP2A;;chr3:157823517..157823562,-!p1@SHOX2!0.97!8.89!SHOX2;;chr19:13134457..13134462,+!p5@NFIX!0.95!14.45!NFIX;;chr6:1389789..1389821,+!p1@FOXF2!0.95!11.11!FOXF2;;chr7:15726296..15726315,-!p1@MEOX2!0.94!7.78!MEOX2;;chr5:321810..321877,+!p1@AHRR!0.93!24.45!AHRR;;chr7:137686763..137686784,-!p5@CREB3L2!0.93!13.34!CREB3L2;;chr2:85980951..85981004,+!p1@ATOH8!0.92!12.23!ATOH8;;chr16:73093174..73093209,-!p3@ZFHX3!0.92!10.00!ZFHX3;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.92!7.78!GLIS1;;chr3:114343826..114343869,-!p4@ZBTB20!0.90!14.45!ZBTB20;;chr17:38256799..38256815,-!p3@NR1D1!0.88!12.23!NR1D1;;chr1:170633100..170633112,+!p19@PRRX1!0.88!6.67!PRRX1;;chr7:27205136..27205164,-!p1@HOXA9!0.88!6.67!HOXA9;;chr8:25902876..25902936,-!p1@EBF2!0.88!6.67!EBF2;;chr11:65687362..65687436,+!p3@DRAP1!0.87!31.12!DRAP1;;chr7:19157043..19157088,-!p2@TWIST1!0.87!16.67!TWIST1;;chr5:137804405..137804444,+!p3@EGR1!0.87!7.78!EGR1;;chr1:61547894..61547968,+!p2@NFIA!0.86!18.89!NFIA;;chr6:85473156..85473210,-!p2@TBX18!0.86!7.78!TBX18;;chr12:66218836..66218888,+!p1@HMGA2!0.85!61.13!HMGA2;;chr11:65667846..65667868,-!p1@FOSL1!0.84!166.71!FOSL1;;chr11:65667884..65667895,-!p2@FOSL1!0.84!24.45!FOSL1;;chr3:107244229..107244254,+!p3@BBX!0.84!10.00!BBX;;chr11:65687222..65687240,+!p7@DRAP1!0.84!7.78!DRAP1;;chr2:71127699..71127744,+!p1@VAX2!0.82!12.23!VAX2;;chr2:45236579..45236596,-!p2@SIX2!0.82!5.56!SIX2;;chr2:85981027..85981047,+!p8@ATOH8!0.82!5.56!ATOH8;;chr12:54394309..54394336,+!p2@HOXC9!0.82!5.56!HOXC9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.82!5.56!HOXC5;;chr19:54058073..54058088,+!p1@ZNF331!0.82!5.56!ZNF331;;chr14:61116183..61116208,-!p1@SIX1!0.81!22.23!SIX1;;chr12:66218255..66218304,+!p3@HMGA2!0.81!15.56!HMGA2;;chr2:46524537..46524553,+!p1@EPAS1!0.80!573.47!EPAS1;;chr7:150946015..150946070,-!p3@SMARCD3!0.80!12.23!SMARCD3;;chr8:60031682..60031710,-!p2@TOX!0.80!8.89!TOX;;chr12:80085061..80085119,-!p6@PAWR!0.80!8.89!PAWR;;chr3:52001448..52001478,-!p2@PCBP4!0.79!78.91!PCBP4;;chr8:77593474..77593612,+!p1@ZFHX4!0.79!23.34!ZFHX4;;chr6:45390025..45390076,+!p2@RUNX2!0.79!13.34!RUNX2;;chr9:14314522..14314556,-!p3@NFIB!0.77!12.23!NFIB;;chr6:45390002..45390023,+!p6@RUNX2!0.77!8.89!RUNX2;;chr19:45971246..45971265,+!p1@FOSB!0.76!98.91!FOSB;;chr12:2986275..2986363,-!p1@FOXM1!0.76!52.23!FOXM1;;chr3:141087339..141087387,+!p2@ZBTB38!0.75!52.23!ZBTB38;;chr1:158979792..158979814,+!p2@IFI16!0.75!48.90!IFI16;;chr3:141087393..141087426,+!p3@ZBTB38!0.75!20.00!ZBTB38;;chr11:120107344..120107351,+!p1@POU2F3!0.74!5.56!POU2F3;;chr12:54394416..54394467,+!p5@HOXC9!0.74!4.45!HOXC9;;chr12:54402729..54402743,+!p3@HOXC8!0.74!4.45!HOXC8;;chr12:66218904..66218913,+!p11@HMGA2!0.74!4.45!HMGA2;;chr13:37494275..37494304,-!p2@SMAD9!0.74!4.45!SMAD9;;chr14:74256787..74256858,-!p6@C14orf43!0.74!4.45!C14orf43;;chr4:111558135..111558198,-!p2@PITX2!0.74!4.45!PITX2;;chr5:158526756..158526797,-!p3@EBF1!0.74!4.45!EBF1;;chr7:150945865..150945896,-!p4@SMARCD3!0.74!4.45!SMARCD3;;chr7:27205106..27205134,-!p2@HOXA9!0.74!4.45!HOXA9;;chr8:77593448..77593471,+!p2@ZFHX4!0.74!4.45!ZFHX4;;chr16:54964899..54964914,+!p2@IRX5!0.74!4.45!IRX5;;chr1:170632250..170632277,+!p7@PRRX1!0.74!4.45!PRRX1;;chr1:44513995..44514031,+!p1@KLF17!0.74!4.45!KLF17;;chr4:2263809..2263854,-!p1@MXD4!0.73!188.93!MXD4;;chr19:22235279..22235301,+!p1@ZNF257!0.73!8.89!ZNF257;;chr19:13134772..13134822,+!p2@NFIX!0.73!6.67!NFIX;;chr14:62162285..62162296,+!p3@HIF1A!0.72!24.45!HIF1A;;chr3:185826764..185826803,-!p2@ETV5!0.72!17.78!ETV5;;chr21:36421535..36421610,-!p2@RUNX1!0.72!16.67!RUNX1;;chr7:137686552..137686564,-!p9@CREB3L2!0.72!6.67!CREB3L2;;chr1:61548225..61548299,+!p1@NFIA!0.71!61.13!NFIA;;chr3:178789522..178789564,-!p2@ZMAT3!0.71!34.45!ZMAT3;;chr12:27485785..27485816,+!p1@ARNTL2!0.71!32.23!ARNTL2;;chr1:158985493..158985535,+!p4@IFI16!0.71!6.67!IFI16;;chr8:103667935..103667960,-!p1@KLF10!0.70!205.60!KLF10;;chr7:137686791..137686821,-!p1@CREB3L2!0.70!132.25!CREB3L2;;chr11:12696071..12696086,+!p3@TEAD1!0.70!5.56!TEAD1;;chr6:144329384..144329405,-!p1@PLAGL1!0.69!52.23!PLAGL1;;chr12:124873852..124873881,-!p3@NCOR2!0.69!26.67!NCOR2;;chr2:46524506..46524514,+!p5@EPAS1!0.69!7.78!EPAS1;;chr17:38256822..38256851,-!p1@NR1D1!0.68!34.45!NR1D1;;chr5:139487608..139487663,+!p3@PURA!0.68!8.89!PURA;;chr10:63809077..63809089,+!p5@ARID5B!0.68!8.89!ARID5B;;chr3:168864315..168864339,-!p2@MECOM!0.68!6.67!MECOM;;chr17:42297226..42297246,-!p14@UBTF!0.67!5.56!UBTF;;chr11:65686776..65686787,+!p9@DRAP1!0.67!4.45!DRAP1;;chr1:151032860..151032918,+!p1@MLLT11!0.66!48.90!MLLT11;;chr5:72744594..72744609,-!p1@FOXD1!0.66!18.89!FOXD1;;chr20:39946279..39946356,-!p1@ZHX3!0.65!63.35!ZHX3;;chr12:2986206..2986258,-!p2@FOXM1!0.65!24.45!FOXM1;;chr3:37217736..37217753,-!p2@LRRFIP2!0.65!16.67!LRRFIP2;;chr1:158979872..158979898,+!p3@IFI16!0.65!12.23!IFI16;;chr8:67525473..67525518,-!p1@MYBL1!0.65!8.89!MYBL1;;chr1:221052700..221052730,+!p5@HLX!0.65!5.56!HLX;;chr14:62162258..62162269,+!p2@HIF1A!0.64!37.79!HIF1A;;chr11:65687158..65687216,+!p4@DRAP1!0.64!22.23!DRAP1;;chrX:83757450..83757485,-!p1@HDX!0.64!16.67!HDX;;chr19:31840130..31840160,-!p2@TSHZ3!0.64!5.56!TSHZ3;;chr12:66218443..66218461,+!p8@HMGA2!0.64!4.45!HMGA2;;chr8:60031809..60031835,-!p4@TOX!0.64!4.45!TOX;;chr5:158526709..158526741,-!p7@EBF1!0.64!3.33!EBF1;;chr8:77596014..77596033,+!p6@ZFHX4!0.64!3.33!ZFHX4;;chr9:115819058..115819082,-!p2@ZFP37!0.64!3.33!ZFP37;;chrX:128657363..128657372,-!p3@SMARCA1!0.64!3.33!SMARCA1;;chr9:16727978..16728010,-!p6@BNC2!0.64!3.33!BNC2;;chr9:16705069..16705086,-!p3@BNC2!0.64!3.33!BNC2;;chrY:21906761..21906810,-!p2@KDM5D!0.64!3.33!KDM5D;;chr9:73028786..73028797,-!p11@KLF9!0.64!3.33!KLF9;;chr9:4299638..4299651,-!p8@GLIS3!0.64!3.33!GLIS3;;chr22:46567171..46567203,+!p6@PPARA!0.64!3.33!PPARA;;chr2:176994408..176994492,+!p1@HOXD8!0.64!3.33!HOXD8;;chr2:185463521..185463557,+!p3@ZNF804A!0.64!3.33!ZNF804A;;chr2:19558327..19558334,-!p2@OSR1!0.64!3.33!OSR1;;chr2:214014959..214015006,-!p4@IKZF2!0.64!3.33!IKZF2;;chr2:66662396..66662407,+!p4@MEIS1!0.64!3.33!MEIS1;;chr2:85981008..85981025,+!p7@ATOH8!0.64!3.33!ATOH8;;chr2:96012397..96012417,+!p3@KCNIP3!0.64!3.33!KCNIP3;;chr3:69811882..69811898,+!p6@MITF!0.64!3.33!MITF;;chr4:299227..299272,-!p1@ZNF732!0.64!3.33!ZNF732;;chr19:50542543..50542548,+!p2@ZNF473!0.64!3.33!ZNF473;;chr19:9609247..9609262,-!p2@ZNF560!0.64!3.33!ZNF560;;chr1:170633245..170633256,+!p14@PRRX1!0.64!3.33!PRRX1;;chr1:170633294..170633303,+!p23@PRRX1!0.64!3.33!PRRX1;;chr1:214161328..214161348,+!p2@PROX1!0.64!3.33!PROX1;;chr12:10870927..10870966,-!p5@CSDA!0.64!3.33!CSDA;;chr12:54378923..54378966,+!p1@HOXC10!0.64!3.33!HOXC10;;chr12:54379477..54379498,+!p5@HOXC5!0.64!3.33!HOXC5;;chr12:66218923..66218934,+!p14@HMGA2!0.64!3.33!HMGA2;;chr12:80085120..80085156,-!p14@PAWR!0.64!3.33!PAWR;;chr13:37494248..37494260,-!p3@SMAD9!0.64!3.33!SMAD9;;chr14:61190359..61190385,-!p4@SIX4!0.64!3.33!SIX4;;chr17:46682321..46682362,-!p1@HOXB6!0.64!3.33!HOXB6;;chr17:48072574..48072597,-!p1@DLX3!0.64!3.33!DLX3;;chr12:124873357..124873401,-!p1@NCOR2!0.63!44.45!NCOR2;;chr3:71179699..71179744,-!p2@FOXP1!0.63!28.90!FOXP1;;chr2:28616358..28616380,+!p3@FOSL2!0.63!20.00!FOSL2;;chr12:54019757..54019804,-!p2@ATF7!0.63!14.45!ATF7;;chr12:27485762..27485776,+!p3@ARNTL2!0.63!10.00!ARNTL2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|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0010316
|fonse_cell_line=FF:0103296
|fonse_cell_line=FF:0103296
|fonse_cell_line_closure=FF:0103296
|fonse_cell_line_closure=FF:0103296
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/bone%2520marrow%2520stromal%2520cell%2520line%253aStromaNKtert.CNhs11931.10686-109F2.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/bone%2520marrow%2520stromal%2520cell%2520line%253aStromaNKtert.CNhs11931.10686-109F2.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/bone%2520marrow%2520stromal%2520cell%2520line%253aStromaNKtert.CNhs11931.10686-109F2.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/bone%2520marrow%2520stromal%2520cell%2520line%253aStromaNKtert.CNhs11931.10686-109F2.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/bone%2520marrow%2520stromal%2520cell%2520line%253aStromaNKtert.CNhs11931.10686-109F2.hg38.nobarcode.ctss.bed.gz
|id=FF:10686-109F2
|is_a=EFO:0002091;;FF:0000210;;FF:0103296
|is_obsolete=
|library_id=CNhs11931
|library_id_phase_based=2:CNhs11931
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10686
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10686
|name=bone marrow stromal cell line:StromaNKtert
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs11931,LSID835,release010,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=109
|rna_catalog_number=
|rna_concentration=0.30102
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=1.92
|rna_od260/280=2.03
|rna_position=F2
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=109F2
|rna_weight_ug=14.14794
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=RCB2350
|sample_cell_line=StromaNKtert
|sample_cell_lot=
|sample_cell_type=stromal cell
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.01665849561905e-209!GO:0043226;organelle;5.34427488812454e-169!GO:0043229;intracellular organelle;1.57830682912045e-168!GO:0005737;cytoplasm;2.6889600630624e-168!GO:0043227;membrane-bound organelle;3.79947650994825e-163!GO:0043231;intracellular membrane-bound organelle;3.79947650994825e-163!GO:0044422;organelle part;7.89306569520384e-135!GO:0044446;intracellular organelle part;4.55252645317245e-133!GO:0044444;cytoplasmic part;1.51826636762883e-113!GO:0032991;macromolecular complex;2.69257960209605e-94!GO:0005515;protein binding;6.86518557917887e-81!GO:0044237;cellular metabolic process;4.61005658510694e-69!GO:0030529;ribonucleoprotein complex;2.35829894375032e-68!GO:0043170;macromolecule metabolic process;3.98505766158737e-68!GO:0044238;primary metabolic process;5.1442288754878e-68!GO:0005634;nucleus;1.07243196115678e-65!GO:0044428;nuclear part;9.56413220223424e-65!GO:0043233;organelle lumen;8.00745061011605e-63!GO:0031974;membrane-enclosed lumen;8.00745061011605e-63!GO:0003723;RNA binding;3.82590884141521e-56!GO:0016043;cellular component organization and biogenesis;2.51614337419667e-53!GO:0043234;protein complex;1.14147084664106e-51!GO:0005739;mitochondrion;4.10550737985882e-47!GO:0031090;organelle membrane;9.40104800813111e-46!GO:0019538;protein metabolic process;1.72431515279537e-44!GO:0033036;macromolecule localization;2.34031750454187e-41!GO:0015031;protein transport;6.53679097169362e-41!GO:0031981;nuclear lumen;7.03520858030049e-40!GO:0044260;cellular macromolecule metabolic process;1.02450301792688e-39!GO:0005840;ribosome;2.70630960964139e-39!GO:0044267;cellular protein metabolic process;6.49390289194172e-39!GO:0045184;establishment of protein localization;9.94706440551607e-38!GO:0043283;biopolymer metabolic process;1.37746365367435e-37!GO:0008104;protein localization;1.37746365367435e-37!GO:0043228;non-membrane-bound organelle;1.52671454556756e-36!GO:0043232;intracellular non-membrane-bound organelle;1.52671454556756e-36!GO:0006396;RNA processing;5.04946068426405e-36!GO:0006412;translation;5.99737638085012e-36!GO:0046907;intracellular transport;9.38931458056792e-36!GO:0016071;mRNA metabolic process;1.69829820515737e-35!GO:0003735;structural constituent of ribosome;2.02396789400279e-35!GO:0006996;organelle organization and biogenesis;1.83790900799465e-34!GO:0031967;organelle envelope;1.78458644976936e-32!GO:0044429;mitochondrial part;2.18961559596359e-32!GO:0031975;envelope;3.51685741534681e-32!GO:0005829;cytosol;1.73797168442724e-31!GO:0033279;ribosomal subunit;2.67714956541453e-31!GO:0006259;DNA metabolic process;1.15056472558956e-30!GO:0008380;RNA splicing;1.95965726687868e-30!GO:0006397;mRNA processing;2.95697462673066e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.05994704455459e-29!GO:0010467;gene expression;4.7461706339292e-29!GO:0009059;macromolecule biosynthetic process;9.21971548683427e-29!GO:0006886;intracellular protein transport;2.82415722056426e-28!GO:0065003;macromolecular complex assembly;6.27143761414328e-28!GO:0009058;biosynthetic process;7.40120435277552e-27!GO:0005654;nucleoplasm;2.39660482342457e-26!GO:0022607;cellular component assembly;1.21046604260492e-24!GO:0051649;establishment of cellular localization;2.32869207490025e-24!GO:0051641;cellular localization;2.36970988363928e-24!GO:0007049;cell cycle;2.36970988363928e-24!GO:0044249;cellular biosynthetic process;4.26304150048418e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.81893322819338e-23!GO:0000166;nucleotide binding;1.67169089244501e-22!GO:0005740;mitochondrial envelope;6.65249757326177e-22!GO:0017111;nucleoside-triphosphatase activity;6.65249757326177e-22!GO:0044451;nucleoplasm part;7.87967220605026e-22!GO:0005681;spliceosome;1.31305687310995e-21!GO:0012505;endomembrane system;1.32990896547261e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.44319310648219e-21!GO:0016462;pyrophosphatase activity;2.1831070481204e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.52042451269853e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;5.46601623192656e-21!GO:0031966;mitochondrial membrane;8.57168069002973e-21!GO:0006119;oxidative phosphorylation;5.09966594086066e-20!GO:0019866;organelle inner membrane;6.24514455422873e-20!GO:0000278;mitotic cell cycle;2.46675334033483e-19!GO:0044445;cytosolic part;6.83687340385168e-19!GO:0008134;transcription factor binding;2.46875576526935e-18!GO:0005743;mitochondrial inner membrane;2.49201396169663e-18!GO:0005783;endoplasmic reticulum;3.99471379113755e-18!GO:0022402;cell cycle process;5.70438940303175e-18!GO:0006457;protein folding;8.74447122625009e-18!GO:0005794;Golgi apparatus;1.85650485918457e-17!GO:0015935;small ribosomal subunit;1.90644649613864e-16!GO:0022618;protein-RNA complex assembly;2.39882659736181e-16!GO:0044455;mitochondrial membrane part;2.96077006063161e-16!GO:0048770;pigment granule;3.3392071823129e-16!GO:0042470;melanosome;3.3392071823129e-16!GO:0044432;endoplasmic reticulum part;8.45517107086052e-16!GO:0015934;large ribosomal subunit;8.7856034879773e-16!GO:0032553;ribonucleotide binding;1.04273844362421e-15!GO:0032555;purine ribonucleotide binding;1.04273844362421e-15!GO:0017076;purine nucleotide binding;1.36788350183351e-15!GO:0003676;nucleic acid binding;2.3996005897705e-15!GO:0006974;response to DNA damage stimulus;2.84952646886215e-15!GO:0044265;cellular macromolecule catabolic process;4.17233820332636e-15!GO:0048193;Golgi vesicle transport;4.38089172911354e-15!GO:0016887;ATPase activity;5.3839839320529e-15!GO:0042623;ATPase activity, coupled;9.29133603139338e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;9.3020197159619e-15!GO:0006512;ubiquitin cycle;1.03646789240673e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.04481571726929e-14!GO:0005524;ATP binding;1.11972495008839e-14!GO:0051276;chromosome organization and biogenesis;1.13654808285024e-14!GO:0043285;biopolymer catabolic process;1.17308631388769e-14!GO:0051301;cell division;1.22236931928795e-14!GO:0005730;nucleolus;1.80447001284977e-14!GO:0019941;modification-dependent protein catabolic process;1.8916167578172e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.8916167578172e-14!GO:0044257;cellular protein catabolic process;2.22395940350208e-14!GO:0000087;M phase of mitotic cell cycle;2.31261829416461e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.91887776109572e-14!GO:0032559;adenyl ribonucleotide binding;3.15252235969955e-14!GO:0016192;vesicle-mediated transport;3.21619320882378e-14!GO:0007067;mitosis;3.2615449330263e-14!GO:0016874;ligase activity;3.26819530744401e-14!GO:0005694;chromosome;4.63694699525719e-14!GO:0005746;mitochondrial respiratory chain;5.68545570683897e-14!GO:0030554;adenyl nucleotide binding;5.86870112911597e-14!GO:0006605;protein targeting;7.94662476223071e-14!GO:0022403;cell cycle phase;9.04867934008979e-14!GO:0051082;unfolded protein binding;9.227101448952e-14!GO:0000502;proteasome complex (sensu Eukaryota);2.28186762361876e-13!GO:0044427;chromosomal part;2.33632445003796e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.55398307631505e-13!GO:0003954;NADH dehydrogenase activity;2.55398307631505e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.55398307631505e-13!GO:0043412;biopolymer modification;3.1691251388299e-13!GO:0003712;transcription cofactor activity;3.23655863206031e-13!GO:0009057;macromolecule catabolic process;3.67495715107714e-13!GO:0031980;mitochondrial lumen;4.54555167237986e-13!GO:0005759;mitochondrial matrix;4.54555167237986e-13!GO:0006281;DNA repair;1.55675773982876e-12!GO:0008135;translation factor activity, nucleic acid binding;1.77212173872636e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.01113943861101e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;3.07973714741622e-12!GO:0030163;protein catabolic process;3.2520069745524e-12!GO:0044248;cellular catabolic process;3.49775102216461e-12!GO:0016070;RNA metabolic process;6.83449357767108e-12!GO:0006464;protein modification process;7.7355427695949e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.00106356900087e-11!GO:0000375;RNA splicing, via transesterification reactions;1.00106356900087e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.00106356900087e-11!GO:0012501;programmed cell death;1.0130987297329e-11!GO:0006323;DNA packaging;1.1789655819657e-11!GO:0005793;ER-Golgi intermediate compartment;1.24794696491477e-11!GO:0051186;cofactor metabolic process;1.28987903423694e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.56367597826999e-11!GO:0045271;respiratory chain complex I;1.56367597826999e-11!GO:0005747;mitochondrial respiratory chain complex I;1.56367597826999e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.65682725525486e-11!GO:0042773;ATP synthesis coupled electron transport;1.65682725525486e-11!GO:0006913;nucleocytoplasmic transport;1.79254691667266e-11!GO:0016604;nuclear body;2.22419380212988e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.30130323213708e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.40455130524316e-11!GO:0006915;apoptosis;2.45470083136887e-11!GO:0005635;nuclear envelope;2.45966831052734e-11!GO:0051169;nuclear transport;2.9532499645523e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.9943852185559e-11!GO:0006260;DNA replication;3.05640828190635e-11!GO:0005761;mitochondrial ribosome;3.07747801334154e-11!GO:0000313;organellar ribosome;3.07747801334154e-11!GO:0008639;small protein conjugating enzyme activity;3.13874514590014e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.8019197472939e-11!GO:0006366;transcription from RNA polymerase II promoter;5.77813448484313e-11!GO:0004842;ubiquitin-protein ligase activity;6.9198958447836e-11!GO:0008219;cell death;7.78940165060143e-11!GO:0016265;death;7.78940165060143e-11!GO:0004386;helicase activity;8.29861776043506e-11!GO:0005789;endoplasmic reticulum membrane;8.54425643555378e-11!GO:0003743;translation initiation factor activity;8.69158406648466e-11!GO:0000279;M phase;9.70044911665135e-11!GO:0019787;small conjugating protein ligase activity;2.40748240472083e-10!GO:0043687;post-translational protein modification;2.44273262799428e-10!GO:0048523;negative regulation of cellular process;2.96355890849744e-10!GO:0009719;response to endogenous stimulus;3.05347074510436e-10!GO:0006413;translational initiation;5.35244428804197e-10!GO:0051726;regulation of cell cycle;5.81076778220404e-10!GO:0015630;microtubule cytoskeleton;6.95531428938757e-10!GO:0000074;regulation of progression through cell cycle;8.19574615262203e-10!GO:0031965;nuclear membrane;8.46862872650175e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.31479940698681e-09!GO:0044453;nuclear membrane part;1.52029693582797e-09!GO:0008026;ATP-dependent helicase activity;2.88512062984806e-09!GO:0016607;nuclear speck;4.02833365403004e-09!GO:0016881;acid-amino acid ligase activity;4.04420046692565e-09!GO:0006446;regulation of translational initiation;4.15023767206176e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.93850992447537e-09!GO:0000785;chromatin;5.95009945567385e-09!GO:0006732;coenzyme metabolic process;7.27019340017695e-09!GO:0006333;chromatin assembly or disassembly;7.68214013596571e-09!GO:0003714;transcription corepressor activity;7.83961757943156e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.26542063533084e-09!GO:0048519;negative regulation of biological process;9.51888333182168e-09!GO:0009055;electron carrier activity;9.643093422467e-09!GO:0044431;Golgi apparatus part;1.43483687559334e-08!GO:0005768;endosome;1.47586512087192e-08!GO:0017038;protein import;1.53913693635741e-08!GO:0019829;cation-transporting ATPase activity;3.28775361680882e-08!GO:0006888;ER to Golgi vesicle-mediated transport;3.32594630553109e-08!GO:0009259;ribonucleotide metabolic process;3.53301638748899e-08!GO:0015986;ATP synthesis coupled proton transport;5.28956172368348e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.28956172368348e-08!GO:0050794;regulation of cellular process;5.76476757708653e-08!GO:0005813;centrosome;6.18997130166191e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.41316835691961e-08!GO:0016564;transcription repressor activity;7.16404623763354e-08!GO:0005819;spindle;8.1779289373869e-08!GO:0006461;protein complex assembly;8.90413839049996e-08!GO:0005815;microtubule organizing center;9.60105228193652e-08!GO:0016568;chromatin modification;1.08523342672381e-07!GO:0009260;ribonucleotide biosynthetic process;1.14239233125e-07!GO:0008565;protein transporter activity;1.27054174463853e-07!GO:0006403;RNA localization;1.27387180508298e-07!GO:0043566;structure-specific DNA binding;1.35380768422465e-07!GO:0050657;nucleic acid transport;1.37351336865177e-07!GO:0051236;establishment of RNA localization;1.37351336865177e-07!GO:0050658;RNA transport;1.37351336865177e-07!GO:0005788;endoplasmic reticulum lumen;1.57915747338424e-07!GO:0065004;protein-DNA complex assembly;1.69728906127448e-07!GO:0009150;purine ribonucleotide metabolic process;1.69830479874602e-07!GO:0007010;cytoskeleton organization and biogenesis;1.72761309497293e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.73800044136105e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.73800044136105e-07!GO:0006163;purine nucleotide metabolic process;1.89169403835836e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.99916618061146e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.04776748081092e-07!GO:0005643;nuclear pore;2.10723704659679e-07!GO:0030120;vesicle coat;2.13842108130083e-07!GO:0030662;coated vesicle membrane;2.13842108130083e-07!GO:0009141;nucleoside triphosphate metabolic process;2.26707345324665e-07!GO:0006164;purine nucleotide biosynthetic process;2.48250731692761e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.76965779855563e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.76965779855563e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.14094738055902e-07!GO:0009144;purine nucleoside triphosphate metabolic process;3.14094738055902e-07!GO:0006754;ATP biosynthetic process;3.16119159852842e-07!GO:0006753;nucleoside phosphate metabolic process;3.16119159852842e-07!GO:0032446;protein modification by small protein conjugation;3.2537676380031e-07!GO:0005667;transcription factor complex;3.52328955634553e-07!GO:0016469;proton-transporting two-sector ATPase complex;4.33168343657024e-07!GO:0065002;intracellular protein transport across a membrane;4.38293738630464e-07!GO:0046034;ATP metabolic process;5.42991771326674e-07!GO:0000151;ubiquitin ligase complex;5.81532207222174e-07!GO:0016567;protein ubiquitination;7.40154997559085e-07!GO:0006793;phosphorus metabolic process;7.88317707339019e-07!GO:0006796;phosphate metabolic process;7.88317707339019e-07!GO:0042254;ribosome biogenesis and assembly;8.74092732443525e-07!GO:0009060;aerobic respiration;8.90015662198499e-07!GO:0031324;negative regulation of cellular metabolic process;8.97271666096075e-07!GO:0048475;coated membrane;9.44698903345843e-07!GO:0030117;membrane coat;9.44698903345843e-07!GO:0000245;spliceosome assembly;9.8867200127409e-07!GO:0031252;leading edge;1.05270792864262e-06!GO:0042981;regulation of apoptosis;1.12893796436768e-06!GO:0043067;regulation of programmed cell death;1.15755640434219e-06!GO:0043069;negative regulation of programmed cell death;1.17105504218682e-06!GO:0016787;hydrolase activity;1.17488428408416e-06!GO:0016563;transcription activator activity;1.18400538302146e-06!GO:0046930;pore complex;1.44054378693392e-06!GO:0009056;catabolic process;1.45181698231799e-06!GO:0051170;nuclear import;1.56529606007586e-06!GO:0006606;protein import into nucleus;1.6011522289898e-06!GO:0043066;negative regulation of apoptosis;1.98829851915098e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.0322291805089e-06!GO:0030532;small nuclear ribonucleoprotein complex;2.06156192068418e-06!GO:0051325;interphase;2.12660454311714e-06!GO:0000139;Golgi membrane;2.12820116947279e-06!GO:0030036;actin cytoskeleton organization and biogenesis;2.17424223800332e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.20389571510909e-06!GO:0044440;endosomal part;2.36928059932046e-06!GO:0010008;endosome membrane;2.36928059932046e-06!GO:0051246;regulation of protein metabolic process;2.7577428428005e-06!GO:0051329;interphase of mitotic cell cycle;2.76434343510939e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.80131976465026e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.8715522513786e-06!GO:0009892;negative regulation of metabolic process;3.11978021745304e-06!GO:0045259;proton-transporting ATP synthase complex;3.20707326799357e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.45064517970586e-06!GO:0003697;single-stranded DNA binding;3.8762862354497e-06!GO:0051028;mRNA transport;3.93730512788382e-06!GO:0016310;phosphorylation;4.92642465683012e-06!GO:0045333;cellular respiration;6.05338753181174e-06!GO:0005773;vacuole;6.75232643888723e-06!GO:0006334;nucleosome assembly;7.0203085039015e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.48724142067949e-06!GO:0051188;cofactor biosynthetic process;7.71797075058559e-06!GO:0005798;Golgi-associated vesicle;7.71797075058559e-06!GO:0003713;transcription coactivator activity;9.11783517953528e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;9.55484439325921e-06!GO:0015399;primary active transmembrane transporter activity;9.55484439325921e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.91712857876814e-06!GO:0008092;cytoskeletal protein binding;9.96456296477119e-06!GO:0006916;anti-apoptosis;1.00718729877715e-05!GO:0031497;chromatin assembly;1.00718729877715e-05!GO:0048522;positive regulation of cellular process;1.08730058539343e-05!GO:0003924;GTPase activity;1.18656974072212e-05!GO:0000775;chromosome, pericentric region;1.29760230336715e-05!GO:0007051;spindle organization and biogenesis;1.33031014235047e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.4210282464973e-05!GO:0050789;regulation of biological process;1.52609474912171e-05!GO:0031988;membrane-bound vesicle;1.67530458820449e-05!GO:0003724;RNA helicase activity;1.75243390623892e-05!GO:0051187;cofactor catabolic process;1.85198872918405e-05!GO:0030029;actin filament-based process;1.95460896766697e-05!GO:0005770;late endosome;1.99689343039838e-05!GO:0016491;oxidoreductase activity;2.09406898723559e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.29115129144297e-05!GO:0006613;cotranslational protein targeting to membrane;2.32626482794963e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.43880515693549e-05!GO:0006099;tricarboxylic acid cycle;2.50055756376563e-05!GO:0046356;acetyl-CoA catabolic process;2.50055756376563e-05!GO:0043492;ATPase activity, coupled to movement of substances;2.57308078010453e-05!GO:0016023;cytoplasmic membrane-bound vesicle;2.6030772279338e-05!GO:0045786;negative regulation of progression through cell cycle;2.6761045785484e-05!GO:0006399;tRNA metabolic process;2.74772882664396e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.79415047780297e-05!GO:0016481;negative regulation of transcription;3.10826801092351e-05!GO:0000323;lytic vacuole;3.23601552356719e-05!GO:0005764;lysosome;3.23601552356719e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.46415676991736e-05!GO:0003682;chromatin binding;3.69760565254991e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.87567859927462e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.87567859927462e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.87567859927462e-05!GO:0043038;amino acid activation;4.12891411274569e-05!GO:0006418;tRNA aminoacylation for protein translation;4.12891411274569e-05!GO:0043039;tRNA aminoacylation;4.12891411274569e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;4.2338878791613e-05!GO:0019899;enzyme binding;4.28448912192823e-05!GO:0016740;transferase activity;4.75740645604248e-05!GO:0008361;regulation of cell size;4.81328846214437e-05!GO:0006091;generation of precursor metabolites and energy;4.99490828250314e-05!GO:0009109;coenzyme catabolic process;5.83038891063799e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;6.73923384480869e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.1543560968576e-05!GO:0016049;cell growth;7.62149015428314e-05!GO:0004298;threonine endopeptidase activity;7.70214282673729e-05!GO:0006084;acetyl-CoA metabolic process;8.01317079748603e-05!GO:0000075;cell cycle checkpoint;8.35322561395997e-05!GO:0045454;cell redox homeostasis;8.38998926185079e-05!GO:0007243;protein kinase cascade;8.61587254579968e-05!GO:0031982;vesicle;9.98121412788375e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000100967503982241!GO:0007005;mitochondrion organization and biogenesis;0.00010231850382759!GO:0005769;early endosome;0.000115550684482009!GO:0006752;group transfer coenzyme metabolic process;0.0001224763910052!GO:0008654;phospholipid biosynthetic process;0.000123742873492936!GO:0016779;nucleotidyltransferase activity;0.000123952484927066!GO:0051789;response to protein stimulus;0.000125260788636578!GO:0006986;response to unfolded protein;0.000125260788636578!GO:0043623;cellular protein complex assembly;0.000126586063011917!GO:0051427;hormone receptor binding;0.000128419352621138!GO:0005048;signal sequence binding;0.000145075673685204!GO:0030867;rough endoplasmic reticulum membrane;0.000148568682600166!GO:0005762;mitochondrial large ribosomal subunit;0.000154193556541907!GO:0000315;organellar large ribosomal subunit;0.000154193556541907!GO:0016859;cis-trans isomerase activity;0.00015621743906734!GO:0009108;coenzyme biosynthetic process;0.000157501556427344!GO:0031410;cytoplasmic vesicle;0.000188502369076141!GO:0051168;nuclear export;0.000202615822641005!GO:0006261;DNA-dependent DNA replication;0.000204246127626598!GO:0003690;double-stranded DNA binding;0.000239732427999248!GO:0035257;nuclear hormone receptor binding;0.000246779808230117!GO:0006364;rRNA processing;0.000258776501659965!GO:0009117;nucleotide metabolic process;0.000263983507280947!GO:0065009;regulation of a molecular function;0.00028144171763435!GO:0008250;oligosaccharyl transferase complex;0.000320491220813947!GO:0015980;energy derivation by oxidation of organic compounds;0.000348610395992941!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000380950679411744!GO:0000776;kinetochore;0.000394605017688486!GO:0043021;ribonucleoprotein binding;0.00040131061288232!GO:0001558;regulation of cell growth;0.000410280187953893!GO:0019843;rRNA binding;0.00041484550905801!GO:0005885;Arp2/3 protein complex;0.000434512807504812!GO:0033116;ER-Golgi intermediate compartment membrane;0.000440855026734648!GO:0042802;identical protein binding;0.000468173284267741!GO:0016072;rRNA metabolic process;0.000488181884705786!GO:0031968;organelle outer membrane;0.000488922534182805!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000495711305493601!GO:0003729;mRNA binding;0.000511297205199217!GO:0019867;outer membrane;0.000537656945287487!GO:0008047;enzyme activator activity;0.000539070040062976!GO:0004576;oligosaccharyl transferase activity;0.000558301774211838!GO:0031072;heat shock protein binding;0.000585939628561569!GO:0008186;RNA-dependent ATPase activity;0.000586431859549535!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000635404821224416!GO:0045941;positive regulation of transcription;0.00071272813578611!GO:0022890;inorganic cation transmembrane transporter activity;0.000753492839287282!GO:0006402;mRNA catabolic process;0.000797093445656934!GO:0016044;membrane organization and biogenesis;0.000820558978311816!GO:0045045;secretory pathway;0.000857042030056393!GO:0048471;perinuclear region of cytoplasm;0.000879506978806864!GO:0051252;regulation of RNA metabolic process;0.000935923233158792!GO:0000314;organellar small ribosomal subunit;0.00105039055475939!GO:0005763;mitochondrial small ribosomal subunit;0.00105039055475939!GO:0005874;microtubule;0.00110364650121588!GO:0030663;COPI coated vesicle membrane;0.00112281804552921!GO:0030126;COPI vesicle coat;0.00112281804552921!GO:0045892;negative regulation of transcription, DNA-dependent;0.00112281804552921!GO:0030027;lamellipodium;0.00113235694973139!GO:0005096;GTPase activator activity;0.00121433006208055!GO:0048518;positive regulation of biological process;0.00121433006208055!GO:0005905;coated pit;0.00121433006208055!GO:0016853;isomerase activity;0.00124389066686754!GO:0003779;actin binding;0.0013185866760063!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00132549898391227!GO:0008022;protein C-terminus binding;0.00135222468067226!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00138462992222302!GO:0005741;mitochondrial outer membrane;0.00150499693852083!GO:0004004;ATP-dependent RNA helicase activity;0.00155274580780518!GO:0030137;COPI-coated vesicle;0.00161591368091098!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00163959456879458!GO:0051920;peroxiredoxin activity;0.00166305219010729!GO:0065007;biological regulation;0.00168274581566136!GO:0001726;ruffle;0.00170628025380523!GO:0019222;regulation of metabolic process;0.00174845464328284!GO:0007052;mitotic spindle organization and biogenesis;0.0018166683486803!GO:0016363;nuclear matrix;0.00182588776574786!GO:0008139;nuclear localization sequence binding;0.00191700001127871!GO:0007059;chromosome segregation;0.00205155766817882!GO:0046474;glycerophospholipid biosynthetic process;0.00206339323724038!GO:0006383;transcription from RNA polymerase III promoter;0.00208180416213049!GO:0005525;GTP binding;0.00211360032928437!GO:0018196;peptidyl-asparagine modification;0.00214068897267273!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00214068897267273!GO:0005876;spindle microtubule;0.00216017920542132!GO:0030133;transport vesicle;0.00218491764168126!GO:0045893;positive regulation of transcription, DNA-dependent;0.00227316382861445!GO:0006891;intra-Golgi vesicle-mediated transport;0.00231796858522718!GO:0046489;phosphoinositide biosynthetic process;0.00236047373062518!GO:0005856;cytoskeleton;0.0024074657118316!GO:0005657;replication fork;0.00249707803304191!GO:0007265;Ras protein signal transduction;0.00251542158418331!GO:0006612;protein targeting to membrane;0.00274717044518319!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00278970077765573!GO:0015992;proton transport;0.0028556789183854!GO:0030132;clathrin coat of coated pit;0.00286682206449352!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00288765967232193!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00292534820243187!GO:0044262;cellular carbohydrate metabolic process;0.00305921326373156!GO:0030521;androgen receptor signaling pathway;0.00310210018130004!GO:0030127;COPII vesicle coat;0.00310210018130004!GO:0012507;ER to Golgi transport vesicle membrane;0.00310210018130004!GO:0030134;ER to Golgi transport vesicle;0.00311962476107955!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00325949597178523!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00325949597178523!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00325949597178523!GO:0030041;actin filament polymerization;0.00328814808806219!GO:0006818;hydrogen transport;0.00328814808806219!GO:0007030;Golgi organization and biogenesis;0.00330068525204405!GO:0006302;double-strand break repair;0.00335790343700265!GO:0003899;DNA-directed RNA polymerase activity;0.00351768417685859!GO:0008094;DNA-dependent ATPase activity;0.00351768417685859!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00358423186833573!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00358423186833573!GO:0040008;regulation of growth;0.00361575250899932!GO:0050790;regulation of catalytic activity;0.00371784085790092!GO:0004674;protein serine/threonine kinase activity;0.00375851278868624!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.00383879764833746!GO:0017166;vinculin binding;0.00385141439169712!GO:0006950;response to stress;0.00400104457655031!GO:0048500;signal recognition particle;0.00414863977662067!GO:0006497;protein amino acid lipidation;0.00431555223326613!GO:0007017;microtubule-based process;0.00431950019433433!GO:0030658;transport vesicle membrane;0.00457598304372197!GO:0000082;G1/S transition of mitotic cell cycle;0.00462744824706364!GO:0051128;regulation of cellular component organization and biogenesis;0.00464605734902955!GO:0007264;small GTPase mediated signal transduction;0.00490575039373273!GO:0008154;actin polymerization and/or depolymerization;0.00514613092595158!GO:0007088;regulation of mitosis;0.00516155385250567!GO:0007346;regulation of progression through mitotic cell cycle;0.00516900773823139!GO:0003678;DNA helicase activity;0.0053757155509088!GO:0007050;cell cycle arrest;0.00558530261365004!GO:0006352;transcription initiation;0.00571147254485444!GO:0000786;nucleosome;0.00622743647916653!GO:0048468;cell development;0.00636499562963007!GO:0006338;chromatin remodeling;0.00639089414438071!GO:0009165;nucleotide biosynthetic process;0.00639089414438071!GO:0005100;Rho GTPase activator activity;0.00681429475441874!GO:0006401;RNA catabolic process;0.00698740461671325!GO:0006892;post-Golgi vesicle-mediated transport;0.00704016211964824!GO:0000059;protein import into nucleus, docking;0.00721225797920496!GO:0032561;guanyl ribonucleotide binding;0.00723802157803403!GO:0019001;guanyl nucleotide binding;0.00723802157803403!GO:0009967;positive regulation of signal transduction;0.00751108934550724!GO:0043488;regulation of mRNA stability;0.00751108934550724!GO:0043487;regulation of RNA stability;0.00751108934550724!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00760283653529922!GO:0005791;rough endoplasmic reticulum;0.00760283653529922!GO:0000922;spindle pole;0.007610067224842!GO:0007093;mitotic cell cycle checkpoint;0.00789473868854921!GO:0006289;nucleotide-excision repair;0.00796258127172484!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00809166813495295!GO:0015002;heme-copper terminal oxidase activity;0.00809166813495295!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00809166813495295!GO:0004129;cytochrome-c oxidase activity;0.00809166813495295!GO:0005862;muscle thin filament tropomyosin;0.00817001054603211!GO:0015631;tubulin binding;0.00818518477284088!GO:0005801;cis-Golgi network;0.00832885897807602!GO:0035258;steroid hormone receptor binding;0.00859215818599957!GO:0051052;regulation of DNA metabolic process;0.00863650637798054!GO:0042158;lipoprotein biosynthetic process;0.00869120345809101!GO:0006509;membrane protein ectodomain proteolysis;0.00875089821619393!GO:0033619;membrane protein proteolysis;0.00875089821619393!GO:0016197;endosome transport;0.00891301687937859!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00919099584113695!GO:0045047;protein targeting to ER;0.00919099584113695!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00948516433254119!GO:0003684;damaged DNA binding;0.00985428014726898!GO:0006405;RNA export from nucleus;0.0100445669177762!GO:0008312;7S RNA binding;0.0102803956168264!GO:0030660;Golgi-associated vesicle membrane;0.0103182593591628!GO:0032508;DNA duplex unwinding;0.0104506846937645!GO:0032392;DNA geometric change;0.0104506846937645!GO:0030176;integral to endoplasmic reticulum membrane;0.0105008353128634!GO:0006268;DNA unwinding during replication;0.0106868263916714!GO:0030118;clathrin coat;0.0108973017152733!GO:0005869;dynactin complex;0.0110520842067108!GO:0006979;response to oxidative stress;0.0110520842067108!GO:0043681;protein import into mitochondrion;0.0111711076624373!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0118100183797853!GO:0046467;membrane lipid biosynthetic process;0.0120075599997158!GO:0006897;endocytosis;0.0121246741142677!GO:0010324;membrane invagination;0.0121246741142677!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0126097931297539!GO:0048487;beta-tubulin binding;0.0128525348367374!GO:0032940;secretion by cell;0.0129518652779924!GO:0030518;steroid hormone receptor signaling pathway;0.0134944846141976!GO:0050681;androgen receptor binding;0.0136700048103676!GO:0007006;mitochondrial membrane organization and biogenesis;0.0147303016589932!GO:0047485;protein N-terminus binding;0.0148835126245141!GO:0030659;cytoplasmic vesicle membrane;0.0150010230166258!GO:0000910;cytokinesis;0.0151058217609224!GO:0033673;negative regulation of kinase activity;0.0152835961085736!GO:0006469;negative regulation of protein kinase activity;0.0152835961085736!GO:0031124;mRNA 3'-end processing;0.0155413939795484!GO:0016584;nucleosome positioning;0.0163511530163588!GO:0006607;NLS-bearing substrate import into nucleus;0.0173614887605892!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0176303468389088!GO:0003711;transcription elongation regulator activity;0.0176303468389088!GO:0008286;insulin receptor signaling pathway;0.01773160636583!GO:0051348;negative regulation of transferase activity;0.017749144158359!GO:0046519;sphingoid metabolic process;0.0178307682371439!GO:0019798;procollagen-proline dioxygenase activity;0.0183326119386052!GO:0005637;nuclear inner membrane;0.0185708614264015!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.018784152819736!GO:0031529;ruffle organization and biogenesis;0.0191604662033113!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0192750651379533!GO:0016301;kinase activity;0.0192750651379533!GO:0031902;late endosome membrane;0.019347741756563!GO:0005875;microtubule associated complex;0.019347741756563!GO:0006611;protein export from nucleus;0.019583446430188!GO:0030833;regulation of actin filament polymerization;0.0198837309347859!GO:0000792;heterochromatin;0.0199628709472043!GO:0016272;prefoldin complex;0.0199628709472043!GO:0006376;mRNA splice site selection;0.0202218883277852!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0202218883277852!GO:0005083;small GTPase regulator activity;0.020699828922959!GO:0051287;NAD binding;0.020699828922959!GO:0008632;apoptotic program;0.020773361161236!GO:0009893;positive regulation of metabolic process;0.0209986640981906!GO:0031901;early endosome membrane;0.0209986640981906!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0210302270063228!GO:0046983;protein dimerization activity;0.0218049072464949!GO:0016408;C-acyltransferase activity;0.0223369702097939!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0225173919482997!GO:0033043;regulation of organelle organization and biogenesis;0.0225173919482997!GO:0006506;GPI anchor biosynthetic process;0.0225173919482997!GO:0007041;lysosomal transport;0.0225701991942478!GO:0043130;ubiquitin binding;0.0225701991942478!GO:0032182;small conjugating protein binding;0.0225701991942478!GO:0050662;coenzyme binding;0.0227006777734615!GO:0005684;U2-dependent spliceosome;0.0228213464966453!GO:0007034;vacuolar transport;0.0232439566782809!GO:0031543;peptidyl-proline dioxygenase activity;0.0237929930194882!GO:0006595;polyamine metabolic process;0.0242901536515785!GO:0022415;viral reproductive process;0.0243185255654981!GO:0035035;histone acetyltransferase binding;0.0245986791399656!GO:0000287;magnesium ion binding;0.0245986791399656!GO:0006672;ceramide metabolic process;0.0246448151868562!GO:0006284;base-excision repair;0.0247863035671648!GO:0044433;cytoplasmic vesicle part;0.0248542590058293!GO:0019206;nucleoside kinase activity;0.0251409189994143!GO:0006650;glycerophospholipid metabolic process;0.0252423608281216!GO:0007266;Rho protein signal transduction;0.0253926463372278!GO:0046483;heterocycle metabolic process;0.0256195857582337!GO:0043022;ribosome binding;0.0256891250801937!GO:0012506;vesicle membrane;0.0257731681977975!GO:0006505;GPI anchor metabolic process;0.0257815566356184!GO:0007040;lysosome organization and biogenesis;0.0259538057767929!GO:0030384;phosphoinositide metabolic process;0.0261115922560282!GO:0043624;cellular protein complex disassembly;0.0261426409864889!GO:0006118;electron transport;0.0261929096757788!GO:0043284;biopolymer biosynthetic process;0.0263811042202415!GO:0006778;porphyrin metabolic process;0.0274962027311122!GO:0033013;tetrapyrrole metabolic process;0.0274962027311122!GO:0043414;biopolymer methylation;0.0283843265658587!GO:0006310;DNA recombination;0.0284477681651007!GO:0005099;Ras GTPase activator activity;0.0285815250300414!GO:0030695;GTPase regulator activity;0.0297954048114614!GO:0008180;signalosome;0.0300738696479321!GO:0000118;histone deacetylase complex;0.0301331984214271!GO:0000209;protein polyubiquitination;0.0308189474058387!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.031432100338834!GO:0003955;NAD(P)H dehydrogenase (quinone) activity;0.0321048022186542!GO:0042393;histone binding;0.0325961384325572!GO:0032906;transforming growth factor-beta2 production;0.0328946387509022!GO:0032909;regulation of transforming growth factor-beta2 production;0.0328946387509022!GO:0033367;protein localization in mast cell secretory granule;0.0338576576211307!GO:0033365;protein localization in organelle;0.0338576576211307!GO:0033371;T cell secretory granule organization and biogenesis;0.0338576576211307!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0338576576211307!GO:0033375;protease localization in T cell secretory granule;0.0338576576211307!GO:0042629;mast cell granule;0.0338576576211307!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0338576576211307!GO:0033364;mast cell secretory granule organization and biogenesis;0.0338576576211307!GO:0033380;granzyme B localization in T cell secretory granule;0.0338576576211307!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0338576576211307!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0338576576211307!GO:0033368;protease localization in mast cell secretory granule;0.0338576576211307!GO:0033366;protein localization in secretory granule;0.0338576576211307!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0338576576211307!GO:0033374;protein localization in T cell secretory granule;0.0338576576211307!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0338597632101666!GO:0032259;methylation;0.0340904104172607!GO:0030119;AP-type membrane coat adaptor complex;0.0343115493205387!GO:0031625;ubiquitin protein ligase binding;0.0349420828038926!GO:0042770;DNA damage response, signal transduction;0.035376666335897!GO:0032984;macromolecular complex disassembly;0.0356317679988596!GO:0045792;negative regulation of cell size;0.0357861370107357!GO:0006414;translational elongation;0.0369813094209447!GO:0015036;disulfide oxidoreductase activity;0.0370025957427054!GO:0005881;cytoplasmic microtubule;0.0372204835960855!GO:0008629;induction of apoptosis by intracellular signals;0.0372410477406887!GO:0042168;heme metabolic process;0.0374081732630233!GO:0003756;protein disulfide isomerase activity;0.0374081732630233!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0374081732630233!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0374081732630233!GO:0006626;protein targeting to mitochondrion;0.0376719862168048!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0381229880701852!GO:0008144;drug binding;0.038140562844958!GO:0030032;lamellipodium biogenesis;0.038420750448471!GO:0051540;metal cluster binding;0.0386186869016822!GO:0051536;iron-sulfur cluster binding;0.0386186869016822!GO:0018193;peptidyl-amino acid modification;0.0390210339614569!GO:0031589;cell-substrate adhesion;0.0390393399673776!GO:0005832;chaperonin-containing T-complex;0.0392994510546604!GO:0030911;TPR domain binding;0.0393222019514214!GO:0030308;negative regulation of cell growth;0.0393222019514214!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0393383748227796!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0396244647997828!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0396244647997828!GO:0032200;telomere organization and biogenesis;0.0396244647997828!GO:0000723;telomere maintenance;0.0396244647997828!GO:0007160;cell-matrix adhesion;0.0408181026871109!GO:0051098;regulation of binding;0.0408275948652266!GO:0000084;S phase of mitotic cell cycle;0.0410148169908944!GO:0005774;vacuolar membrane;0.0410694919928974!GO:0004003;ATP-dependent DNA helicase activity;0.041136147849045!GO:0030522;intracellular receptor-mediated signaling pathway;0.041402038370731!GO:0043087;regulation of GTPase activity;0.0416353473862638!GO:0007242;intracellular signaling cascade;0.0417020164128282!GO:0008243;plasminogen activator activity;0.0423393695199051!GO:0006839;mitochondrial transport;0.0426988548345524!GO:0005784;translocon complex;0.042718585187029!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0429110491512045!GO:0051087;chaperone binding;0.0445218025355086!GO:0000819;sister chromatid segregation;0.0446391788270786!GO:0051338;regulation of transferase activity;0.0449274444914994!GO:0008234;cysteine-type peptidase activity;0.0464902301847631!GO:0030125;clathrin vesicle coat;0.0464902301847631!GO:0030665;clathrin coated vesicle membrane;0.0464902301847631!GO:0051101;regulation of DNA binding;0.0465392103084224!GO:0008283;cell proliferation;0.0467304224781789!GO:0000070;mitotic sister chromatid segregation;0.0481684317494589!GO:0019902;phosphatase binding;0.0482537994848688!GO:0005591;collagen type VIII;0.0489968673860077!GO:0005598;short-chain collagen;0.0489968673860077!GO:0008168;methyltransferase activity;0.0491544639832993!GO:0007033;vacuole organization and biogenesis;0.0493832104778588
|sample_id=10686
|sample_note=
|sample_sex=unknown
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=bone marrow
|top_motifs=FOXL1:2.10090991755;HBP1_HMGB_SSRP1_UBTF:2.09665051933;FOXA2:1.66294293351;NR3C1:1.64716851785;HMGA1,2:1.36664237429;PDX1:1.32405049653;HOX{A5,B5}:1.12507124598;HAND1,2:1.05909696465;STAT5{A,B}:1.05452077652;TEAD1:1.05279866064;EN1,2:1.04719020866;FOXO1,3,4:1.03241831323;VSX1,2:1.02419582089;GFI1:0.982635219377;NFATC1..3:0.96182487473;TAL1_TCF{3,4,12}:0.956903884692;GFI1B:0.956015419373;SRF:0.924648728237;NR1H4:0.908229834419;MAFB:0.897308517917;ZNF238:0.842699921692;MEF2{A,B,C,D}:0.830062753309;SOX17:0.807935265833;POU3F1..4:0.782292783206;NR6A1:0.755392674208;LHX3,4:0.724726913678;LEF1_TCF7_TCF7L1,2:0.720093831782;POU5F1:0.708312187422;TLX1..3_NFIC{dimer}:0.695998057459;PAX4:0.691128825568;NKX2-2,8:0.635624322303;TFDP1:0.627038983858;EVI1:0.620511340865;ADNP_IRX_SIX_ZHX:0.586918646786;POU1F1:0.586242083927;GTF2A1,2:0.565765454833;FOX{I1,J2}:0.563778545348;GZF1:0.535511071198;TFAP2{A,C}:0.531853841053;TP53:0.530287366202;AIRE:0.496171138618;ZBTB6:0.48712441834;PITX1..3:0.473415976736;MTE{core}:0.422500464804;NANOG:0.41774327682;NKX2-3_NKX2-5:0.417100584622;GTF2I:0.39914496983;FOXM1:0.392970946345;AR:0.392455041751;PPARG:0.387185066624;HOX{A4,D4}:0.38419172619;MYB:0.373144792777;E2F1..5:0.355315821186;NHLH1,2:0.354856427497;NKX2-1,4:0.354241897537;ATF6:0.351387866536;AHR_ARNT_ARNT2:0.334490125768;TFAP4:0.320127357039;MZF1:0.311018285537;DBP:0.310263633278;TEF:0.305948460904;BACH2:0.298733859952;NFE2L1:0.297600257805;TGIF1:0.281286417243;FOSL2:0.253349066552;NFE2L2:0.25007102939;MYBL2:0.206130908407;HIC1:0.205451183575;IKZF1:0.205182170682;TFCP2:0.196373212059;MAZ:0.194887443844;FOS_FOS{B,L1}_JUN{B,D}:0.175841562864;EBF1:0.171174961253;HES1:0.166322233475;XBP1:0.16281501646;PRRX1,2:0.160365361505;PAX3,7:0.159118474509;NFE2:0.14958147814;DMAP1_NCOR{1,2}_SMARC:0.135764396044;ZFP161:0.128675432301;GLI1..3:0.114365008325;FOX{D1,D2}:0.103306947035;POU2F1..3:0.102795574131;GATA4:0.0983539364679;TBX4,5:0.0981467183797;HNF1A:0.0849212159815;PAX5:0.0625861251424;IRF1,2:0.0491359357154;CDC5L:0.0352399653132;PAX6:0.0316625979831;SOX2:0.0288901797304;TFAP2B:0.0285403443157;NKX3-2:0.0236346411624;ONECUT1,2:0.018005720481;NFIX:0.0175601231;IRF7:0.00837662889504;FOXD3:0.0020993458029;MED-1{core}:-0.00245653727192;HSF1,2:-0.0248289284821;MTF1:-0.0266096162505;GCM1,2:-0.0319214054325;HLF:-0.0371266276042;STAT2,4,6:-0.0465518551658;POU6F1:-0.0504361930701;BREu{core}:-0.0524446825997;RUNX1..3:-0.0588752919548;MYFfamily:-0.0810000925764;ZNF148:-0.0920391188563;EGR1..3:-0.108876238079;JUN:-0.14759403146;ATF4:-0.167485385627;FOXP1:-0.172226683949;RBPJ:-0.194857069322;PRDM1:-0.207077168362;NANOG{mouse}:-0.209452969941;ETS1,2:-0.214478582674;CUX2:-0.223218402986;FOXN1:-0.223550444609;OCT4_SOX2{dimer}:-0.228418738273;PAX1,9:-0.240326353084;ZNF384:-0.250855471645;T:-0.255972799485;ALX4:-0.262952811533;PAX8:-0.275437665865;XCPE1{core}:-0.281351583248;TBP:-0.306352256966;KLF4:-0.312149590092;SREBF1,2:-0.31630417434;NFKB1_REL_RELA:-0.318489753994;RFX2..5_RFXANK_RFXAP:-0.3213102523;RORA:-0.325904914608;HNF4A_NR2F1,2:-0.327974388528;ZIC1..3:-0.340260052743;ATF5_CREB3:-0.345724222376;ZBTB16:-0.349716350195;GATA6:-0.352301430187;UFEwm:-0.352737363027;RXR{A,B,G}:-0.354839270454;PAX2:-0.357146575683;NFIL3:-0.363950512938;CEBPA,B_DDIT3:-0.369937804532;CRX:-0.377323870299;HMX1:-0.378902842082;NFY{A,B,C}:-0.38332069527;YY1:-0.385668643257;TLX2:-0.389046554934;ESRRA:-0.396055790345;BPTF:-0.397878290159;SMAD1..7,9:-0.403706899981;SPIB:-0.404249785764;FOXP3:-0.407212080278;RFX1:-0.409940586101;FOX{F1,F2,J1}:-0.412909058758;bHLH_family:-0.448035003234;NR5A1,2:-0.448234937471;FOXQ1:-0.452864021218;SPZ1:-0.465461470616;ZNF423:-0.475024102699;NKX3-1:-0.481931491252;ZNF143:-0.489475898246;ARID5B:-0.49377928471;NRF1:-0.496927095224;PBX1:-0.5012104813;SPI1:-0.55898548015;EP300:-0.569058717462;ELF1,2,4:-0.573836006944;IKZF2:-0.605067533984;TOPORS:-0.613489947647;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.620015070043;PATZ1:-0.623844086926;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.629852213238;SOX{8,9,10}:-0.646053802377;SOX5:-0.6700273768;RXRA_VDR{dimer}:-0.72279396361;SP1:-0.727548143204;CREB1:-0.767912578845;REST:-0.770474611297;ESR1:-0.784898118879;SNAI1..3:-0.815795020814;RREB1:-0.840153776146;HOXA9_MEIS1:-0.865274493261;CDX1,2,4:-0.88179632736;HIF1A:-0.884980140991;ELK1,4_GABP{A,B1}:-0.905397268857;ZEB1:-0.905668211288;MYOD1:-0.935819963599;ATF2:-1.11110796982;LMO2:-1.1357506607;NKX6-1,2:-1.21659362515;ALX1:-1.68854043851;STAT1,3:-1.71566964134;HOX{A6,A7,B6,B7}:-1.78111307697
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10686-109F2;search_select_hide=table117:FF:10686-109F2
}}
}}

Latest revision as of 14:32, 3 June 2020

Name:bone marrow stromal cell line:StromaNKtert
Species:Human (Homo sapiens)
Library ID:CNhs11931
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone marrow
dev stageNA
sexunknown
ageNA
cell typestromal cell
cell lineStromaNKtert
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005109
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11931 CAGE DRX007836 DRR008708
Accession ID Hg19

Library idBAMCTSS
CNhs11931 DRZ000133 DRZ001518
Accession ID Hg38

Library idBAMCTSS
CNhs11931 DRZ011483 DRZ012868
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.115
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.328
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.325
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.00347
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.113
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.131
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0133
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.16
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0563
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.059
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.256
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.465
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.298
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11931

Jaspar motifP-value
MA0002.20.224
MA0003.10.167
MA0004.10.306
MA0006.10.593
MA0007.10.234
MA0009.10.676
MA0014.10.971
MA0017.10.86
MA0018.20.0271
MA0019.10.432
MA0024.10.804
MA0025.10.0127
MA0027.10.497
MA0028.16.17158e-6
MA0029.10.142
MA0030.10.496
MA0031.10.812
MA0035.20.127
MA0038.10.922
MA0039.20.031
MA0040.10.617
MA0041.10.271
MA0042.10.0555
MA0043.10.00426
MA0046.10.766
MA0047.20.386
MA0048.10.442
MA0050.10.8
MA0051.10.798
MA0052.10.447
MA0055.10.533
MA0057.10.892
MA0058.10.209
MA0059.10.524
MA0060.10.503
MA0061.10.531
MA0062.22.58542e-12
MA0065.20.503
MA0066.10.296
MA0067.10.185
MA0068.10.849
MA0069.10.534
MA0070.10.369
MA0071.10.696
MA0072.10.665
MA0073.10.887
MA0074.10.208
MA0076.13.64633e-7
MA0077.10.414
MA0078.10.538
MA0079.20.445
MA0080.27.65732e-4
MA0081.10.252
MA0083.19.12456e-5
MA0084.10.0858
MA0087.10.522
MA0088.10.714
MA0090.12.11278e-9
MA0091.10.453
MA0092.10.0678
MA0093.10.255
MA0099.25.30188e-9
MA0100.10.976
MA0101.10.863
MA0102.20.309
MA0103.10.00659
MA0104.20.0536
MA0105.10.62
MA0106.10.368
MA0107.10.811
MA0108.20.0876
MA0111.10.715
MA0112.20.153
MA0113.10.00536
MA0114.10.667
MA0115.10.972
MA0116.10.804
MA0117.10.493
MA0119.10.00145
MA0122.10.897
MA0124.10.601
MA0125.10.911
MA0131.10.258
MA0135.10.243
MA0136.10.00462
MA0137.20.175
MA0138.20.24
MA0139.10.371
MA0140.10.418
MA0141.10.697
MA0142.10.426
MA0143.10.598
MA0144.10.977
MA0145.10.0261
MA0146.10.115
MA0147.10.21
MA0148.10.0512
MA0149.10.559
MA0150.10.0162
MA0152.10.0408
MA0153.10.851
MA0154.10.307
MA0155.10.374
MA0156.10.0227
MA0157.10.217
MA0159.10.957
MA0160.10.978
MA0162.10.611
MA0163.10.666
MA0164.10.714
MA0258.10.333
MA0259.10.293



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11931

Novel motifP-value
10.0481
100.387
1000.206
1010.839
1020.0272
1030.382
1040.416
1050.308
1060.322
1070.0028
1080.957
1090.927
110.482
1100.871
1110.193
1120.557
1130.327
1140.567
1150.163
1160.692
1170.479
1180.104
1190.325
120.797
1200.809
1210.963
1220.668
1230.623
1240.724
1250.764
1260.83
1270.634
1280.585
1290.186
130.915
1300.0635
1310.622
1320.306
1330.998
1340.192
1350.743
1360.132
1370.521
1380.845
1390.337
140.227
1400.135
1410.429
1420.648
1430.248
1440.602
1450.0669
1460.189
1470.582
1480.234
1490.484
150.213
1500.11
1510.491
1520.306
1530.401
1540.849
1550.116
1560.608
1570.221
1580.568
1590.644
160.509
1600.938
1610.641
1620.816
1630.966
1640.0822
1650.86
1660.436
1670.901
1680.415
1690.434
170.163
180.262
190.111
20.738
200.929
210.403
220.431
230.0101
240.44
250.528
260.286
270.887
280.723
290.197
30.654
300.989
310.508
320.0604
330.764
340.596
350.813
360.976
370.799
380.464
390.499
40.883
400.352
410.45
420.495
430.219
440.207
450.523
460.149
470.87
480.995
490.139
50.257
500.665
510.68
520.832
530.926
540.124
550.0399
560.619
570.108
580.76
590.164
60.94
600.643
610.578
620.45
630.451
640.63
650.201
660.117
670.396
680.812
690.979
70.865
700.627
710.539
720.554
730.738
740.124
750.207
760.166
770.182
780.727
790.968
80.175
800.137
810.362
820.642
830.088
840.362
850.342
860.791
870.902
880.618
890.866
90.649
900.369
910.663
920.379
930.453
940.0727
950.0537
960.0771
970.0439
980.697
990.182



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11931


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0002371 (bone marrow)
0001474 (bone element)
0002384 (connective tissue)
0007195 (stroma of bone marrow)
0000479 (tissue)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0010317 (germ layer / neural crest derived structure)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002390 (hematopoietic system)
0002193 (hemolymphoid system)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0103296 (bone marrow stromal cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

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