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(Created page with "{{f5samples |id=FF:11241-116D8 |name=Myoblast, donor1 |sample_id=11241 |rna_tube_id=116D8 |rna_box=116 |rna_position=D8 |sample_cell_lot=N/A |sample_cell_catalog=N/A ...")
 
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{{f5samples
{{f5samples
|id=FF:11241-116D8
|DRA_sample_Accession=CAGE@SAMD00004887
|name=Myoblast, donor1
|DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004887
|sample_id=11241
|accession_numbers=CAGE;DRX008367;DRR009239;DRZ000664;DRZ002049;DRZ012014;DRZ013399
|rna_tube_id=116D8
|accession_numbers_RNASeq=sRNA-Seq;DRX037139;DRR041505;DRZ007147
|rna_box=116
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001134,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002036,UBERON:0002385,UBERON:0010317,UBERON:0001015,UBERON:0002204,UBERON:0000383
|rna_position=D8
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000055,CL:0000003,CL:0000548,CL:0000680,CL:0002321,CL:0002371,CL:0000056,CL:0000255,CL:0000515
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=SKM1
|rna_catalog_number=SC3525
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=fetus
|sample_tissue=skeletal muscle
|sample_donor(cell lot)=
|sample_sex=female
|sample_age=58
|sample_ethnicity=unknown
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=skeletal muscle myoblast
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=10.00000
|rna_concentration=0.41800
|sample_note=
|profile_hcage=CNhs10870,LSID703,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=SRhi10009,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000056,CL:0000144,CL:0000220,CL:0000222,CL:0000255,CL:0000355,CL:0000515,CL:0000548,CL:0000680,CL:0000723,CL:0002321,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000119,UBERON:0000383,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000486,UBERON:0000490,UBERON:0000914,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001015,UBERON:0001062,UBERON:0001134,UBERON:0002036,UBERON:0002050,UBERON:0002204,UBERON:0002329,UBERON:0002385,UBERON:0002532,UBERON:0003059,UBERON:0003077,UBERON:0003082,UBERON:0003104,UBERON:0004120,UBERON:0004290,UBERON:0005291,UBERON:0005423,UBERON:0009142
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000164
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr12:81110684..81110700,+!p1@MYF5!2.38!241.21!MYF5;;chr11:65686802..65686818,+!p6@DRAP1!1.53!55.89!DRAP1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.53!32.58!HOXC5;;chr11:17741111..17741124,+!p1@MYOD1!1.49!29.82!MYOD1;;chr8:25902876..25902936,-!p1@EBF2!1.41!24.61!EBF2;;chr1:40105299..40105326,-!p1@HEYL!1.40!24.32!HEYL;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.38!22.73!ZBED1;;chr7:19157248..19157268,-!p1@TWIST1!1.26!46.91!TWIST1;;chr12:54402745..54402788,+!p1@HOXC8!1.22!15.78!HOXC8;;chr11:65687362..65687436,+!p3@DRAP1!1.20!67.32!DRAP1;;chr15:42749722..42749739,-!p2@ZFP106!1.19!25.63!ZFP106;;chr1:170632285..170632309,+!p1@PRRX1!1.18!16.07!PRRX1;;chr11:65686732..65686756,+!p2@DRAP1!1.17!57.62!DRAP1;;chr11:65687222..65687240,+!p7@DRAP1!1.17!17.66!DRAP1;;chr1:203055129..203055147,-!p1@MYOG!1.13!12.45!MYOG;;chr2:19558373..19558392,-!p1@OSR1!1.11!32.87!OSR1;;chr2:85981107..85981120,+!p3@ATOH8!1.08!11.15!ATOH8;;chr11:65687243..65687276,+!p8@DRAP1!1.06!14.19!DRAP1;;chr12:66218836..66218888,+!p1@HMGA2!1.03!91.50!HMGA2;;chr8:49833948..49833973,-!p2@SNAI2!1.02!60.95!SNAI2;;chr14:61116183..61116208,-!p1@SIX1!1.01!36.05!SIX1;;chr12:54393880..54393962,+!p1@HOXC9!1.01!9.12!HOXC9;;chr14:62162285..62162296,+!p3@HIF1A!1.00!47.34!HIF1A;;chr16:86600426..86600441,+!p1@FOXC2!1.00!22.59!FOXC2;;chr15:57511609..57511651,+!p2@TCF12!1.00!15.20!TCF12;;chr3:141121847..141121868,+!p5@ZBTB38!0.99!13.61!ZBTB38;;chr14:62162258..62162269,+!p2@HIF1A!0.98!83.97!HIF1A;;chr11:65667884..65667895,-!p2@FOSL1!0.98!34.02!FOSL1;;chr12:54378923..54378966,+!p1@HOXC10!0.97!8.25!HOXC10;;chr10:131762504..131762555,-!p1@EBF3!0.96!8.11!EBF3;;chr7:15726296..15726315,-!p1@MEOX2!0.96!8.11!MEOX2;;chr10:31607702..31607755,+!p3@ZEB1!0.93!8.69!ZEB1;;chr17:46682321..46682362,-!p1@HOXB6!0.93!7.53!HOXB6;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.92!7.24!HOXC5;;chr12:66218923..66218934,+!p14@HMGA2!0.92!7.24!HMGA2;;chr2:85981073..85981091,+!p5@ATOH8!0.92!7.24!ATOH8;;chr11:46299199..46299233,+!p1@CREB3L1!0.91!38.66!CREB3L1;;chr1:170633262..170633285,+!p3@PRRX1!0.91!8.25!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.91!7.09!PRRX1;;chr12:66218904..66218913,+!p11@HMGA2!0.90!6.95!HMGA2;;chr12:66218598..66218645,+!p2@HMGA2!0.89!32.43!HMGA2;;chr4:111558135..111558198,-!p2@PITX2!0.88!6.52!PITX2;;chr19:47523058..47523114,+!p1@NPAS1!0.86!6.23!NPAS1;;chr11:46299539..46299620,+!p2@CREB3L1!0.85!10.71!CREB3L1;;chr12:66218255..66218304,+!p3@HMGA2!0.84!16.94!HMGA2;;chr11:17741254..17741282,+!p2@MYOD1!0.84!5.94!MYOD1;;chr9:35732647..35732678,+!p2@CREB3!0.83!34.60!CREB3;;chr8:49833978..49833996,-!p1@SNAI2!0.82!124.22!SNAI2;;chr1:44513995..44514031,+!p1@KLF17!0.82!5.65!KLF17;;chr2:45236540..45236577,-!p1@SIX2!0.81!5.50!SIX2;;chr1:170633348..170633399,+!p2@PRRX1!0.78!7.09!PRRX1;;chr2:239756671..239756732,+!p1@TWIST2!0.77!16.94!TWIST2;;chr4:26322267..26322334,+!p3@RBPJ!0.77!12.60!RBPJ;;chr2:85981027..85981047,+!p8@ATOH8!0.77!4.92!ATOH8;;chr11:65687158..65687216,+!p4@DRAP1!0.76!30.11!DRAP1;;chr21:36421535..36421610,-!p2@RUNX1!0.76!18.53!RUNX1;;chr2:85981008..85981025,+!p7@ATOH8!0.76!4.78!ATOH8;;chr1:8926441..8926473,-!p10@ENO1!0.75!7.24!ENO1;;chr12:54380036..54380091,+!p4@HOXC10!0.75!4.63!HOXC10;;chr2:102091144..102091183,-!p2@RFX8!0.75!4.63!RFX8;;chr1:170632959..170632987,+!p4@PRRX1!0.74!5.07!PRRX1;;chr4:111544219..111544240,-!p1@PITX2!0.74!4.49!PITX2;;chr12:54380404..54380433,+!p3@HOXC10!0.74!4.49!HOXC10;;chr12:54402729..54402743,+!p3@HOXC8!0.72!4.20!HOXC8;;chr11:65667846..65667868,-!p1@FOSL1!0.71!124.80!FOSL1;;chr3:170076314..170076334,+!p2@SKIL!0.71!5.65!SKIL;;chr1:170632723..170632739,+!p8@PRRX1!0.70!4.05!PRRX1;;chr2:239756739..239756755,+!p2@TWIST2!0.69!7.09!TWIST2;;chr10:31610110..31610159,+!p2@ZEB1!0.69!3.91!ZEB1;;chr12:54402790..54402805,+!p2@HOXC8!0.69!3.91!HOXC8;;chr7:15726243..15726293,-!p2@MEOX2!0.69!3.91!MEOX2;;chr20:39946361..39946379,-!p2@ZHX3!0.68!12.60!ZHX3;;chr7:27205106..27205134,-!p2@HOXA9!0.68!3.76!HOXA9;;chr10:31607811..31607837,+!p6@ZEB1!0.68!3.76!ZEB1;;chr12:54394309..54394336,+!p2@HOXC9!0.68!3.76!HOXC9;;chr2:119605214..119605230,-!p1@EN1!0.68!3.76!EN1;;chr11:65686952..65686975,+!p5@DRAP1!0.67!23.31!DRAP1;;chr3:114343768..114343822,-!p1@ZBTB20!0.66!17.66!ZBTB20;;chr1:170632250..170632277,+!p7@PRRX1!0.66!3.62!PRRX1;;chr7:19157043..19157088,-!p2@TWIST1!0.65!9.70!TWIST1;;chr17:46688334..46688385,-!p1@HOXB7!0.65!5.36!HOXB7;;chr17:46687959..46688007,-!p2@HOXB7!0.65!5.07!HOXB7;;chr4:26323870..26323885,+!p13@RBPJ!0.65!3.47!RBPJ;;chr1:23885981..23886002,-!p1@ID3!0.64!696.40!ID3;;chr12:53614115..53614154,-!p1@RARG!0.64!20.70!RARG;;chr2:85980951..85981004,+!p1@ATOH8!0.64!5.94!ATOH8;;chr22:19748231..19748317,+!p1@TBX1!0.64!3.33!TBX1;;chr3:21792682..21792720,-!p1@ZNF385D!0.64!3.33!ZNF385D;;chr8:67525443..67525459,-!p2@MYBL1!0.63!5.21!MYBL1;;chr6:85473156..85473210,-!p2@TBX18!0.63!4.20!TBX18;;chr17:46622440..46622477,-!p5@HOXB2!0.63!3.76!HOXB2;;chr3:21792585..21792625,-!p2@ZNF385D!0.62!3.62!ZNF385D;;chr2:119604456..119604501,-!p2@EN1!0.62!3.19!EN1;;chrX:85403445..85403479,+!p2@DACH2!0.62!3.19!DACH2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.61!262.78!TAX1BP3;;chr3:141087393..141087426,+!p3@ZBTB38!0.61!14.33!ZBTB38;;chr7:27205136..27205164,-!p1@HOXA9!0.61!3.04!HOXA9;;chr10:119303078..119303169,+!p2@EMX2!0.61!3.04!EMX2;;chr2:185463247..185463263,+!p1@ZNF804A!0.60!5.79!ZNF804A;;chr1:8938709..8938720,-!p3@ENO1!0.59!173.74!ENO1;;chr11:125034640..125034655,+!p1@PKNOX2!0.59!2.90!PKNOX2;;chr12:54332608..54332636,+!p1@HOXC13!0.59!2.90!HOXC13;;chr14:37131058..37131139,+!p1@PAX9!0.59!2.90!PAX9;;chr3:141121871..141121885,+!p13@ZBTB38!0.59!2.90!ZBTB38;;chr2:191878874..191878938,-!p1@STAT1!0.58!188.07!STAT1;;chr2:145275162..145275202,-!p2@ZEB2!0.58!20.12!ZEB2;;chr8:77593474..77593612,+!p1@ZFHX4!0.58!14.19!ZFHX4;;chr17:59477233..59477263,+!p1@TBX2!0.58!10.28!TBX2;;chr12:80085061..80085119,-!p6@PAWR!0.58!4.92!PAWR;;chr4:26322373..26322393,+!p4@RBPJ!0.58!4.49!RBPJ;;chr11:12696071..12696086,+!p3@TEAD1!0.58!3.91!TEAD1;;chr5:92918956..92918969,+!p4@NR2F1!0.58!3.19!NR2F1;;chr5:139487608..139487663,+!p3@PURA!0.57!6.66!PURA;;chr2:214015111..214015179,-!p1@IKZF2!0.57!5.50!IKZF2;;chr1:170632477..170632506,+!p6@PRRX1!0.57!2.75!PRRX1;;chr12:66218183..66218209,+!p4@HMGA2!0.56!5.79!HMGA2;;chr2:200322654..200322707,-!p2@SATB2!0.56!4.20!SATB2;;chr3:141121820..141121838,+!p9@ZBTB38!0.56!2.61!ZBTB38;;chr12:54394416..54394467,+!p5@HOXC9!0.56!2.61!HOXC9;;chr1:119530493..119530572,-!p1@TBX15!0.56!2.61!TBX15;;chr7:27196267..27196311,-!p1@HOXA7!0.56!2.61!HOXA7;;chr17:46621146..46621180,-!p10@HOXB2!0.56!2.61!HOXB2;;chr10:31608127..31608156,+!p1@ZEB1!0.55!59.94!ZEB1;;chr1:151032860..151032918,+!p1@MLLT11!0.55!38.08!MLLT11;;chr5:92918919..92918942,+!p1@NR2F1!0.55!14.04!NR2F1;;chr12:66218212..66218244,+!p5@HMGA2!0.55!4.05!HMGA2;;chr15:83953397..83953425,-!p1@BNC1!0.55!3.04!BNC1;;chr5:72744445..72744466,-!p2@FOXD1!0.54!4.63!FOXD1;;chr2:191878812..191878823,-!p2@STAT1!0.54!3.33!STAT1;;chr11:65686776..65686787,+!p9@DRAP1!0.54!3.04!DRAP1;;chr12:115121802..115121814,-!p5@TBX3!0.54!2.46!TBX3;;chr7:15725757..15725828,-!p5@MEOX2!0.54!2.46!MEOX2;;chr7:15725992..15726043,-!p7@MEOX2!0.54!2.46!MEOX2;;chr17:46622070..46622109,-!p1@HOXB2!0.53!6.23!HOXB2;;chr16:54320158..54320200,-!p5@IRX3!0.53!3.76!IRX3;;chr11:113930425..113930471,+!p1@ZBTB16!0.53!3.76!ZBTB16;;chr10:31288398..31288455,-!p2@ZNF438!0.53!2.90!ZNF438;;chr12:115121962..115121987,-!p1@TBX3!0.52!24.76!TBX3;;chr2:85981222..85981259,+!p2@ATOH8!0.52!4.34!ATOH8;;chr19:13134772..13134822,+!p2@NFIX!0.52!3.76!NFIX;;chr8:145159846..145159889,+!p6@MAF1!0.52!3.62!MAF1;;chr2:102091566..102091581,-!p1@RFX8!0.52!2.32!RFX8;;chr4:26322673..26322684,+!p11@RBPJ!0.52!2.32!RBPJ;;chr11:17741084..17741094,+!p3@MYOD1!0.52!2.32!MYOD1;;chr12:54379029..54379057,+!p2@HOXC10!0.52!2.32!HOXC10;;chr12:54422217..54422239,+!p3@HOXC6!0.52!2.32!HOXC6;;chr19:2867325..2867348,+!p1@ZNF556!0.52!2.32!ZNF556;;chr14:62162224..62162254,+!p1@HIF1A!0.51!433.04!HIF1A;;chr1:151032922..151032951,+!p2@MLLT11!0.50!4.05!MLLT11;;chr17:46622114..46622138,-!p4@HOXB2!0.50!3.76!HOXB2;;chr17:48072574..48072597,-!p1@DLX3!0.50!2.17!DLX3;;chr2:176994408..176994492,+!p1@HOXD8!0.50!2.17!HOXD8;;chr12:54332687..54332701,+!p3@HOXC13!0.50!2.17!HOXC13;;chr12:54380112..54380126,+!p5@HOXC10!0.50!2.17!HOXC10;;chr12:54394059..54394088,+!p3@HOXC9!0.50!2.17!HOXC9;;chr7:150946015..150946070,-!p3@SMARCD3!0.49!5.36!SMARCD3;;chr7:137686763..137686784,-!p5@CREB3L2!0.49!4.20!CREB3L2;;chr5:134369905..134369972,-!p1@PITX1!0.49!3.62!PITX1;;chr3:157823517..157823562,-!p1@SHOX2!0.49!2.32!SHOX2;;chr12:96588219..96588263,+!p2@ELK3!0.48!19.26!ELK3;;chr9:35732514..35732530,+!p5@CREB3!0.48!3.19!CREB3;;chr12:66357214..66357233,+!p13@HMGA2!0.48!2.03!HMGA2;;chr12:66358080..66358094,+!p15@HMGA2!0.48!2.03!HMGA2;;chr16:31076332..31076388,-!p3@ZNF668!0.48!2.03!ZNF668;;chr16:86600458..86600461,+!p3@FOXC2!0.48!2.03!FOXC2;;chr3:147127142..147127168,+!p1@ZIC1!0.48!2.03!ZIC1;;chr3:21792631..21792665,-!p3@ZNF385D!0.48!2.03!ZNF385D;;chr1:170632683..170632696,+!p12@PRRX1!0.48!2.03!PRRX1;;chr20:30193083..30193098,+!p1@ID1!0.47!218.33!ID1;;chr18:32870260..32870293,+!p1@ZNF271!0.47!33.59!ZNF271;;chr17:46621937..46621966,-!p2@HOXB2!0.47!6.66!HOXB2;;chr12:66218378..66218401,+!p6@HMGA2!0.47!3.47!HMGA2;;chr16:54320617..54320643,-!p3@IRX3!0.47!2.75!IRX3;;chr12:124873357..124873401,-!p1@NCOR2!0.46!29.97!NCOR2;;chr12:96588279..96588299,+!p4@ELK3!0.46!11.87!ELK3;;chr1:211433275..211433335,+!p2@RCOR3!0.46!7.38!RCOR3;;chr12:96588368..96588394,+!p3@ELK3!0.46!6.37!ELK3;;chr10:77161133..77161176,-!p3@ZNF503!0.46!4.92!ZNF503;;chr14:62203595..62203676,+!p4@HIF1A!0.46!4.20!HIF1A;;chr1:158985493..158985535,+!p4@IFI16!0.46!3.33!IFI16;;chr12:66218443..66218461,+!p8@HMGA2!0.46!2.61!HMGA2;;chr14:62164416..62164443,+!p27@HIF1A!0.46!1.88!HIF1A;;chr16:1429010..1429038,-!p5@UNKL!0.46!1.88!UNKL;;chr16:86600870..86600921,+!p2@FOXC2!0.46!1.88!FOXC2;;chr2:214014959..214015006,-!p4@IKZF2!0.46!1.88!IKZF2;;chr2:85980903..85980914,+!p11@ATOH8!0.46!1.88!ATOH8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|fonse_cell_line_closure=
Line 67: Line 43:
|fonse_treatment=
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|fonse_treatment_closure=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Myoblast%252c%2520donor1.CNhs10870.11241-116D8.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Myoblast%252c%2520donor1.CNhs10870.11241-116D8.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Myoblast%252c%2520donor1.CNhs10870.11241-116D8.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Myoblast%252c%2520donor1.CNhs10870.11241-116D8.hg38.nobarcode.ctss.bed.gz
|id=FF:11241-116D8
|is_a=EFO:0002091;;FF:0000164
|is_obsolete=
|library_id=CNhs10870
|library_id_phase_based=2:CNhs10870
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11241
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.ATGTCA.11241
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11241
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.ATGTCA.11241
|name=Myoblast, donor1
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|profile_hcage=CNhs10870,LSID703,release008,COMPLETED
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|rna_box=116
|rna_catalog_number=SC3525
|rna_concentration=0.418
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=SKM1
|rna_od260/230=
|rna_od260/280=
|rna_position=D8
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=116D8
|rna_weight_ug=10
|rnaseq_library_id=SRhi10009.ATGTCA
|sample_age=58
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=skeletal muscle myoblast
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=fetus
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=unknown
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.26272517261519e-221!GO:0005737;cytoplasm;2.67995620622269e-200!GO:0043226;organelle;8.15790893108145e-176!GO:0043229;intracellular organelle;1.80003801654487e-175!GO:0043231;intracellular membrane-bound organelle;4.76211611467183e-166!GO:0043227;membrane-bound organelle;8.46561700096792e-166!GO:0044444;cytoplasmic part;2.3311473279349e-154!GO:0044422;organelle part;1.78078935294006e-142!GO:0044446;intracellular organelle part;6.46239971545456e-141!GO:0032991;macromolecular complex;4.05877565467182e-99!GO:0030529;ribonucleoprotein complex;1.3111003843482e-83!GO:0005515;protein binding;4.24189321331353e-79!GO:0044238;primary metabolic process;5.29937153942093e-72!GO:0044237;cellular metabolic process;1.05640905487172e-71!GO:0043233;organelle lumen;4.72074759682542e-69!GO:0031974;membrane-enclosed lumen;4.72074759682542e-69!GO:0005739;mitochondrion;1.18836893376966e-67!GO:0043170;macromolecule metabolic process;1.03764360490367e-64!GO:0044428;nuclear part;3.23765888353223e-63!GO:0003723;RNA binding;1.09802672003417e-62!GO:0031090;organelle membrane;2.13589157132321e-55!GO:0005634;nucleus;3.88720609870173e-52!GO:0005840;ribosome;2.30389384702437e-51!GO:0043234;protein complex;1.60274474461674e-50!GO:0019538;protein metabolic process;9.7173676238669e-48!GO:0044429;mitochondrial part;1.23355993452308e-46!GO:0006412;translation;1.24891346851638e-46!GO:0016043;cellular component organization and biogenesis;3.91751609963312e-46!GO:0003735;structural constituent of ribosome;1.05611836290135e-44!GO:0015031;protein transport;2.26155244176986e-44!GO:0006396;RNA processing;1.20942951862756e-43!GO:0033036;macromolecule localization;1.539596063831e-43!GO:0009058;biosynthetic process;1.24910928172712e-42!GO:0044260;cellular macromolecule metabolic process;7.90553849249118e-42!GO:0031967;organelle envelope;1.03587852399005e-41!GO:0031975;envelope;2.70736134058591e-41!GO:0045184;establishment of protein localization;3.00357259591247e-41!GO:0044267;cellular protein metabolic process;3.44450408312793e-41!GO:0008104;protein localization;1.76234592355439e-40!GO:0005829;cytosol;1.06594017244934e-39!GO:0009059;macromolecule biosynthetic process;1.39718657835354e-38!GO:0031981;nuclear lumen;1.47887875542565e-38!GO:0033279;ribosomal subunit;2.55271115841099e-38!GO:0044249;cellular biosynthetic process;3.53605630473987e-38!GO:0046907;intracellular transport;3.55021047117062e-36!GO:0043228;non-membrane-bound organelle;2.27248414412697e-33!GO:0043232;intracellular non-membrane-bound organelle;2.27248414412697e-33!GO:0016071;mRNA metabolic process;2.49595461658029e-33!GO:0008380;RNA splicing;2.82900056105515e-32!GO:0005740;mitochondrial envelope;1.71448489014592e-31!GO:0043283;biopolymer metabolic process;9.31109260121181e-31!GO:0031966;mitochondrial membrane;9.74431885859082e-30!GO:0006397;mRNA processing;2.08413287848104e-29!GO:0010467;gene expression;3.99950709407658e-29!GO:0006886;intracellular protein transport;4.60868433493717e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.13734365024729e-28!GO:0006996;organelle organization and biogenesis;3.42987310263606e-28!GO:0019866;organelle inner membrane;3.81690448984157e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.13287772768256e-27!GO:0005743;mitochondrial inner membrane;7.53831194643458e-27!GO:0065003;macromolecular complex assembly;9.89081628945969e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.3209686194124e-25!GO:0022607;cellular component assembly;4.60309444897212e-25!GO:0005783;endoplasmic reticulum;2.60252857763894e-23!GO:0006457;protein folding;2.60252857763894e-23!GO:0012505;endomembrane system;3.53126153536059e-23!GO:0051641;cellular localization;3.56489101722662e-23!GO:0051649;establishment of cellular localization;3.79844070622838e-23!GO:0006119;oxidative phosphorylation;5.23411477525892e-23!GO:0005681;spliceosome;8.4876087350851e-23!GO:0044445;cytosolic part;2.36380502167217e-22!GO:0005654;nucleoplasm;3.98496005582975e-22!GO:0044455;mitochondrial membrane part;2.57202487811651e-21!GO:0015934;large ribosomal subunit;6.20386654893639e-20!GO:0005794;Golgi apparatus;8.34206410014729e-20!GO:0015935;small ribosomal subunit;3.00647017281446e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.44272708718079e-19!GO:0016462;pyrophosphatase activity;4.08789516333867e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;5.46479355579883e-19!GO:0017111;nucleoside-triphosphatase activity;1.18247235743815e-18!GO:0044432;endoplasmic reticulum part;1.21520210687126e-18!GO:0005730;nucleolus;3.08202681391522e-18!GO:0031980;mitochondrial lumen;5.26380272115183e-18!GO:0005759;mitochondrial matrix;5.26380272115183e-18!GO:0000166;nucleotide binding;6.84756227084478e-18!GO:0044451;nucleoplasm part;9.68356343188725e-18!GO:0048770;pigment granule;1.18191912975007e-17!GO:0042470;melanosome;1.18191912975007e-17!GO:0005746;mitochondrial respiratory chain;1.4885002320897e-17!GO:0006259;DNA metabolic process;3.79928316415946e-17!GO:0051186;cofactor metabolic process;4.97045833963921e-17!GO:0006512;ubiquitin cycle;7.68485797999041e-17!GO:0022618;protein-RNA complex assembly;1.34426942141359e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.54843805331232e-16!GO:0016874;ligase activity;2.83179914543371e-16!GO:0000502;proteasome complex (sensu Eukaryota);4.63497029648237e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;8.15571722830325e-16!GO:0044265;cellular macromolecule catabolic process;9.76720755621809e-16!GO:0019941;modification-dependent protein catabolic process;1.68196337060046e-15!GO:0043632;modification-dependent macromolecule catabolic process;1.68196337060046e-15!GO:0044257;cellular protein catabolic process;2.12988863882486e-15!GO:0007049;cell cycle;4.02077608875346e-15!GO:0006511;ubiquitin-dependent protein catabolic process;4.10355807272629e-15!GO:0050136;NADH dehydrogenase (quinone) activity;5.96130674650537e-15!GO:0003954;NADH dehydrogenase activity;5.96130674650537e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;5.96130674650537e-15!GO:0005761;mitochondrial ribosome;6.67509927734655e-15!GO:0000313;organellar ribosome;6.67509927734655e-15!GO:0043285;biopolymer catabolic process;8.24118847346432e-15!GO:0008135;translation factor activity, nucleic acid binding;1.17211403702194e-14!GO:0051082;unfolded protein binding;1.41611316238707e-14!GO:0048193;Golgi vesicle transport;1.72901100626722e-14!GO:0006605;protein targeting;3.60669958820089e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.05750694043264e-14!GO:0044248;cellular catabolic process;8.2768064811226e-14!GO:0009057;macromolecule catabolic process;8.57307084891323e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.03519034914419e-13!GO:0030163;protein catabolic process;1.60817785862883e-13!GO:0016192;vesicle-mediated transport;1.68445913637351e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.17166561957658e-13!GO:0042773;ATP synthesis coupled electron transport;2.17166561957658e-13!GO:0030964;NADH dehydrogenase complex (quinone);2.8691439292254e-13!GO:0045271;respiratory chain complex I;2.8691439292254e-13!GO:0005747;mitochondrial respiratory chain complex I;2.8691439292254e-13!GO:0006732;coenzyme metabolic process;4.82397565632315e-13!GO:0005793;ER-Golgi intermediate compartment;6.40086475545825e-13!GO:0042254;ribosome biogenesis and assembly;6.92754581345048e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.22717222526171e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.38641478147668e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.17248552403484e-12!GO:0003676;nucleic acid binding;1.26538537633307e-12!GO:0008134;transcription factor binding;1.50395159719139e-12!GO:0017076;purine nucleotide binding;1.57545426613208e-12!GO:0009259;ribonucleotide metabolic process;2.23896738980853e-12!GO:0032553;ribonucleotide binding;2.26970302178024e-12!GO:0032555;purine ribonucleotide binding;2.26970302178024e-12!GO:0005789;endoplasmic reticulum membrane;3.94175433887009e-12!GO:0009055;electron carrier activity;5.87425477193929e-12!GO:0000278;mitotic cell cycle;7.9388721195458e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;8.77637616989907e-12!GO:0000375;RNA splicing, via transesterification reactions;8.77637616989907e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.77637616989907e-12!GO:0022402;cell cycle process;1.06334746621046e-11!GO:0006163;purine nucleotide metabolic process;1.15368575104487e-11!GO:0006974;response to DNA damage stimulus;1.37055286749948e-11!GO:0009150;purine ribonucleotide metabolic process;2.02265994427544e-11!GO:0003743;translation initiation factor activity;2.26747258112083e-11!GO:0043412;biopolymer modification;2.36453200705045e-11!GO:0005635;nuclear envelope;3.33790007711318e-11!GO:0031965;nuclear membrane;7.98940373719605e-11!GO:0009199;ribonucleoside triphosphate metabolic process;1.07203940220603e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.35516312178329e-10!GO:0006413;translational initiation;1.39698057511473e-10!GO:0009260;ribonucleotide biosynthetic process;1.41942618410485e-10!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.19086461216957e-10!GO:0009144;purine nucleoside triphosphate metabolic process;2.19086461216957e-10!GO:0006164;purine nucleotide biosynthetic process;2.24346805907561e-10!GO:0009141;nucleoside triphosphate metabolic process;2.24828827455773e-10!GO:0006464;protein modification process;2.3544350270085e-10!GO:0005524;ATP binding;2.38685061743273e-10!GO:0009152;purine ribonucleotide biosynthetic process;3.83899931579861e-10!GO:0008639;small protein conjugating enzyme activity;4.10463247635065e-10!GO:0030554;adenyl nucleotide binding;4.32197730339454e-10!GO:0032559;adenyl ribonucleotide binding;4.487573881881e-10!GO:0019787;small conjugating protein ligase activity;4.98870169419974e-10!GO:0042623;ATPase activity, coupled;5.4775374068693e-10!GO:0004842;ubiquitin-protein ligase activity;7.93438117880218e-10!GO:0005788;endoplasmic reticulum lumen;8.3413874663532e-10!GO:0016604;nuclear body;8.43268811797668e-10!GO:0016070;RNA metabolic process;9.56959258707361e-10!GO:0016887;ATPase activity;1.06625024479503e-09!GO:0044453;nuclear membrane part;1.15247727069351e-09!GO:0006446;regulation of translational initiation;1.55267717847829e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.61126585573397e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.6208250277372e-09!GO:0008565;protein transporter activity;1.83199055194115e-09!GO:0006281;DNA repair;2.06663843395994e-09!GO:0012501;programmed cell death;2.41580370127341e-09!GO:0006888;ER to Golgi vesicle-mediated transport;3.91008567922729e-09!GO:0046034;ATP metabolic process;3.99572663068839e-09!GO:0044431;Golgi apparatus part;4.1710729601445e-09!GO:0016881;acid-amino acid ligase activity;4.30924169110745e-09!GO:0009142;nucleoside triphosphate biosynthetic process;4.55198154338444e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.55198154338444e-09!GO:0006915;apoptosis;6.10895907553403e-09!GO:0015986;ATP synthesis coupled proton transport;6.91672150220604e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.91672150220604e-09!GO:0015078;hydrogen ion transmembrane transporter activity;9.15656879368646e-09!GO:0006399;tRNA metabolic process;9.16367738227254e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.19289762976239e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.19289762976239e-09!GO:0009060;aerobic respiration;1.13368476664127e-08!GO:0019829;cation-transporting ATPase activity;1.26052522642969e-08!GO:0009719;response to endogenous stimulus;1.33206523211739e-08!GO:0000087;M phase of mitotic cell cycle;1.35173284138899e-08!GO:0005768;endosome;1.37791793686624e-08!GO:0007067;mitosis;1.93381920587763e-08!GO:0006461;protein complex assembly;2.34739139174358e-08!GO:0051188;cofactor biosynthetic process;2.4946384956247e-08!GO:0030120;vesicle coat;2.6444977870304e-08!GO:0030662;coated vesicle membrane;2.6444977870304e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.70239114982282e-08!GO:0006913;nucleocytoplasmic transport;3.21023615881041e-08!GO:0006364;rRNA processing;3.63023133367746e-08!GO:0003712;transcription cofactor activity;3.67148163324067e-08!GO:0008219;cell death;3.91622090002824e-08!GO:0016265;death;3.91622090002824e-08!GO:0045333;cellular respiration;4.01737773799222e-08!GO:0043687;post-translational protein modification;4.53241539538811e-08!GO:0007005;mitochondrion organization and biogenesis;4.70655594773608e-08!GO:0048523;negative regulation of cellular process;5.10957669677929e-08!GO:0016607;nuclear speck;5.54270312837325e-08!GO:0051169;nuclear transport;6.29260310334611e-08!GO:0016072;rRNA metabolic process;6.52071883769385e-08!GO:0000074;regulation of progression through cell cycle;7.57649268387311e-08!GO:0048475;coated membrane;7.68464755546705e-08!GO:0030117;membrane coat;7.68464755546705e-08!GO:0009056;catabolic process;7.89337351113088e-08!GO:0051726;regulation of cell cycle;8.48903242669899e-08!GO:0006260;DNA replication;9.96820913955742e-08!GO:0005643;nuclear pore;1.05025708079156e-07!GO:0016491;oxidoreductase activity;1.31453656534356e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.31748181252637e-07!GO:0065002;intracellular protein transport across a membrane;1.38687359657525e-07!GO:0022403;cell cycle phase;1.45150831044298e-07!GO:0006754;ATP biosynthetic process;1.6370859610411e-07!GO:0006753;nucleoside phosphate metabolic process;1.6370859610411e-07!GO:0003924;GTPase activity;2.12532223004528e-07!GO:0004386;helicase activity;2.15080480012586e-07!GO:0016853;isomerase activity;2.26119747820561e-07!GO:0006099;tricarboxylic acid cycle;2.26119747820561e-07!GO:0046356;acetyl-CoA catabolic process;2.26119747820561e-07!GO:0051187;cofactor catabolic process;2.74290382467537e-07!GO:0008092;cytoskeletal protein binding;3.17060071975347e-07!GO:0017038;protein import;3.22698462374509e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.04977619992866e-07!GO:0004812;aminoacyl-tRNA ligase activity;4.04977619992866e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.04977619992866e-07!GO:0000139;Golgi membrane;4.18779533453887e-07!GO:0009117;nucleotide metabolic process;4.48729413885002e-07!GO:0030532;small nuclear ribonucleoprotein complex;4.61355009410014e-07!GO:0051246;regulation of protein metabolic process;5.22277513893605e-07!GO:0043038;amino acid activation;5.36330181651343e-07!GO:0006418;tRNA aminoacylation for protein translation;5.36330181651343e-07!GO:0043039;tRNA aminoacylation;5.36330181651343e-07!GO:0009109;coenzyme catabolic process;5.62006202929774e-07!GO:0005694;chromosome;6.74919073091738e-07!GO:0051301;cell division;6.8979029062151e-07!GO:0006084;acetyl-CoA metabolic process;8.38414368763786e-07!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;8.95351155470982e-07!GO:0008026;ATP-dependent helicase activity;9.1715236016494e-07!GO:0048519;negative regulation of biological process;1.07232462508488e-06!GO:0016859;cis-trans isomerase activity;1.0937971021738e-06!GO:0009108;coenzyme biosynthetic process;1.12772371481807e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.45943630499585e-06!GO:0006752;group transfer coenzyme metabolic process;1.74632071434426e-06!GO:0015630;microtubule cytoskeleton;1.91172946769133e-06!GO:0046930;pore complex;1.94322372066033e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.37080580167852e-06!GO:0003697;single-stranded DNA binding;2.66116610612143e-06!GO:0006403;RNA localization;2.76455733045044e-06!GO:0006916;anti-apoptosis;2.83073654293527e-06!GO:0005798;Golgi-associated vesicle;2.92086742290717e-06!GO:0050657;nucleic acid transport;3.1349534809654e-06!GO:0051236;establishment of RNA localization;3.1349534809654e-06!GO:0050658;RNA transport;3.1349534809654e-06!GO:0045259;proton-transporting ATP synthase complex;3.13799840813822e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.21548341738277e-06!GO:0043069;negative regulation of programmed cell death;4.02927386113116e-06!GO:0031988;membrane-bound vesicle;4.12373780524122e-06!GO:0008654;phospholipid biosynthetic process;4.4631669575189e-06!GO:0016023;cytoplasmic membrane-bound vesicle;4.54224713927344e-06!GO:0006613;cotranslational protein targeting to membrane;5.46736560706898e-06!GO:0032446;protein modification by small protein conjugation;6.0677803608644e-06!GO:0043566;structure-specific DNA binding;6.14214672599106e-06!GO:0016567;protein ubiquitination;6.40509717731772e-06!GO:0045454;cell redox homeostasis;6.40509717731772e-06!GO:0005773;vacuole;7.04153970641733e-06!GO:0043066;negative regulation of apoptosis;7.18228211906186e-06!GO:0031252;leading edge;7.22782294157131e-06!GO:0006091;generation of precursor metabolites and energy;8.12632101719934e-06!GO:0051276;chromosome organization and biogenesis;8.31409242686085e-06!GO:0044440;endosomal part;8.31756576802758e-06!GO:0010008;endosome membrane;8.31756576802758e-06!GO:0000151;ubiquitin ligase complex;8.56631368770554e-06!GO:0016740;transferase activity;9.32715831772638e-06!GO:0016779;nucleotidyltransferase activity;1.03830313596198e-05!GO:0005769;early endosome;1.04401081914579e-05!GO:0044427;chromosomal part;1.30898124828296e-05!GO:0000245;spliceosome assembly;1.36115323793043e-05!GO:0004298;threonine endopeptidase activity;1.40120524276439e-05!GO:0006366;transcription from RNA polymerase II promoter;1.44157401214346e-05!GO:0042981;regulation of apoptosis;1.51336989080578e-05!GO:0007010;cytoskeleton organization and biogenesis;1.52791751225814e-05!GO:0043067;regulation of programmed cell death;1.52791751225814e-05!GO:0065004;protein-DNA complex assembly;1.5487010423798e-05!GO:0005762;mitochondrial large ribosomal subunit;1.62481751522422e-05!GO:0000315;organellar large ribosomal subunit;1.62481751522422e-05!GO:0005770;late endosome;1.75018467875599e-05!GO:0031982;vesicle;1.92898916113564e-05!GO:0000279;M phase;1.95855340244844e-05!GO:0031968;organelle outer membrane;2.18656493225681e-05!GO:0019867;outer membrane;2.25081307962639e-05!GO:0051789;response to protein stimulus;2.25081307962639e-05!GO:0006986;response to unfolded protein;2.25081307962639e-05!GO:0031410;cytoplasmic vesicle;2.31735319869702e-05!GO:0016787;hydrolase activity;2.33737201352338e-05!GO:0030867;rough endoplasmic reticulum membrane;2.45188734418912e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;2.59490937438102e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.74578175855371e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.90567705329114e-05!GO:0015980;energy derivation by oxidation of organic compounds;3.11782596113765e-05!GO:0005667;transcription factor complex;3.34303650352593e-05!GO:0003714;transcription corepressor activity;4.0275981987341e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.43027404492732e-05!GO:0030036;actin cytoskeleton organization and biogenesis;4.61850122461997e-05!GO:0030029;actin filament-based process;5.06835460533769e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.54783309962231e-05!GO:0006323;DNA packaging;5.78105028420768e-05!GO:0050794;regulation of cellular process;5.86977730831127e-05!GO:0000323;lytic vacuole;5.99184882563975e-05!GO:0005764;lysosome;5.99184882563975e-05!GO:0005813;centrosome;6.50231706954769e-05!GO:0030133;transport vesicle;6.94497927512016e-05!GO:0051028;mRNA transport;7.07056968733709e-05!GO:0051170;nuclear import;7.90251086081845e-05!GO:0033116;ER-Golgi intermediate compartment membrane;8.2127797298291e-05!GO:0043623;cellular protein complex assembly;8.24459120427349e-05!GO:0005791;rough endoplasmic reticulum;8.68190734225756e-05!GO:0003724;RNA helicase activity;9.02707465465354e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;9.72497082901161e-05!GO:0045786;negative regulation of progression through cell cycle;0.000102682875969894!GO:0005525;GTP binding;0.000110122158886121!GO:0005741;mitochondrial outer membrane;0.0001105790714664!GO:0006612;protein targeting to membrane;0.000115161187190834!GO:0008361;regulation of cell size;0.000115454277395856!GO:0046474;glycerophospholipid biosynthetic process;0.000115797127942748!GO:0000314;organellar small ribosomal subunit;0.000115797127942748!GO:0005763;mitochondrial small ribosomal subunit;0.000115797127942748!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000118242817267856!GO:0043021;ribonucleoprotein binding;0.000118889200303124!GO:0005048;signal sequence binding;0.000135027332883697!GO:0031324;negative regulation of cellular metabolic process;0.000150075920544714!GO:0006606;protein import into nucleus;0.000170514831137467!GO:0016049;cell growth;0.000171068183971239!GO:0005815;microtubule organizing center;0.000172551104788273!GO:0051427;hormone receptor binding;0.000186650254261745!GO:0006839;mitochondrial transport;0.000190152336345321!GO:0005905;coated pit;0.000212087583199828!GO:0009165;nucleotide biosynthetic process;0.000230092339427411!GO:0005885;Arp2/3 protein complex;0.000243231580330352!GO:0044262;cellular carbohydrate metabolic process;0.000260487311469429!GO:0004576;oligosaccharyl transferase activity;0.000261113375446408!GO:0051329;interphase of mitotic cell cycle;0.000287716251597916!GO:0008250;oligosaccharyl transferase complex;0.00031214379708744!GO:0030663;COPI coated vesicle membrane;0.000353479463985705!GO:0030126;COPI vesicle coat;0.000353479463985705!GO:0006333;chromatin assembly or disassembly;0.000364148650402819!GO:0035257;nuclear hormone receptor binding;0.000376730145924382!GO:0043681;protein import into mitochondrion;0.00037768647459858!GO:0016564;transcription repressor activity;0.000390250892292651!GO:0051325;interphase;0.00040174561310511!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000413086032674051!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000448636820030235!GO:0003899;DNA-directed RNA polymerase activity;0.0004541845694061!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00045438130430429!GO:0050789;regulation of biological process;0.00045582022724038!GO:0005819;spindle;0.000458225385441276!GO:0046467;membrane lipid biosynthetic process;0.000490216978803991!GO:0003779;actin binding;0.000490341064053568!GO:0006626;protein targeting to mitochondrion;0.000505203192994588!GO:0001558;regulation of cell growth;0.000550421004375801!GO:0003713;transcription coactivator activity;0.000554535285759929!GO:0009892;negative regulation of metabolic process;0.00057574491858175!GO:0006793;phosphorus metabolic process;0.000607577509387393!GO:0006796;phosphate metabolic process;0.000607577509387393!GO:0046489;phosphoinositide biosynthetic process;0.000626821724771901!GO:0018196;peptidyl-asparagine modification;0.000702190919694528!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000702190919694528!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000738479841220973!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00076624993008387!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000806252101707129!GO:0015399;primary active transmembrane transporter activity;0.000806252101707129!GO:0051920;peroxiredoxin activity;0.00081200758865906!GO:0042802;identical protein binding;0.000883255430215697!GO:0032561;guanyl ribonucleotide binding;0.000928755103650953!GO:0019001;guanyl nucleotide binding;0.000928755103650953!GO:0006891;intra-Golgi vesicle-mediated transport;0.000935027974564112!GO:0044452;nucleolar part;0.00105443412975466!GO:0030137;COPI-coated vesicle;0.00108048276623935!GO:0019843;rRNA binding;0.00108088976166964!GO:0022890;inorganic cation transmembrane transporter activity;0.00109823864185606!GO:0007006;mitochondrial membrane organization and biogenesis;0.00114552445632206!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00116982560343559!GO:0016310;phosphorylation;0.00117666765137598!GO:0006414;translational elongation;0.00120816464982045!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00126652827251829!GO:0006261;DNA-dependent DNA replication;0.00127864137559903!GO:0016044;membrane organization and biogenesis;0.00129183714682941!GO:0031072;heat shock protein binding;0.00135285273786156!GO:0016568;chromatin modification;0.00141731898335442!GO:0006334;nucleosome assembly;0.00143293768093664!GO:0019899;enzyme binding;0.00144346911757185!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00144346911757185!GO:0048471;perinuclear region of cytoplasm;0.00145190031870115!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00148817092682945!GO:0015002;heme-copper terminal oxidase activity;0.00148817092682945!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00148817092682945!GO:0004129;cytochrome-c oxidase activity;0.00148817092682945!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00149979728871668!GO:0051252;regulation of RNA metabolic process;0.00152309043281819!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00152774554000264!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00152774554000264!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00152774554000264!GO:0030176;integral to endoplasmic reticulum membrane;0.00153005807747504!GO:0048500;signal recognition particle;0.0015512564257846!GO:0046483;heterocycle metabolic process;0.0015828573450988!GO:0000785;chromatin;0.0016219396737314!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00170810393755816!GO:0006383;transcription from RNA polymerase III promoter;0.00186740806693928!GO:0000075;cell cycle checkpoint;0.00189301738075896!GO:0007051;spindle organization and biogenesis;0.00191320075807294!GO:0008610;lipid biosynthetic process;0.00192857393207682!GO:0003729;mRNA binding;0.00196534687938678!GO:0030658;transport vesicle membrane;0.00200320161907213!GO:0030132;clathrin coat of coated pit;0.00203224329312454!GO:0008186;RNA-dependent ATPase activity;0.00217487417033163!GO:0016563;transcription activator activity;0.00234394445603417!GO:0016363;nuclear matrix;0.00245981655376374!GO:0043284;biopolymer biosynthetic process;0.0025031328043584!GO:0007050;cell cycle arrest;0.00252612040268029!GO:0006979;response to oxidative stress;0.00253158640062095!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0026330790078332!GO:0015992;proton transport;0.00264065696691778!GO:0015629;actin cytoskeleton;0.00306439841693229!GO:0000059;protein import into nucleus, docking;0.00317825846180896!GO:0001726;ruffle;0.00327704077449583!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00343436109042023!GO:0045047;protein targeting to ER;0.00343436109042023!GO:0008139;nuclear localization sequence binding;0.00344111099604864!GO:0006818;hydrogen transport;0.00344111099604864!GO:0006950;response to stress;0.00366708710824153!GO:0030118;clathrin coat;0.00371351579886008!GO:0016197;endosome transport;0.00371351579886008!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00381332996063523!GO:0031497;chromatin assembly;0.00386780527012916!GO:0008180;signalosome;0.00392963254734411!GO:0051087;chaperone binding;0.00419137085124371!GO:0008312;7S RNA binding;0.00424509345946602!GO:0008033;tRNA processing;0.00424509345946602!GO:0043492;ATPase activity, coupled to movement of substances;0.00430499465125422!GO:0006650;glycerophospholipid metabolic process;0.00441246051078672!GO:0035258;steroid hormone receptor binding;0.00451227587778217!GO:0048487;beta-tubulin binding;0.00463326192045316!GO:0051168;nuclear export;0.00473561376644099!GO:0001952;regulation of cell-matrix adhesion;0.00482254957843829!GO:0065009;regulation of a molecular function;0.0048953593758395!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00489571460353159!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00503294823878923!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00503294823878923!GO:0051540;metal cluster binding;0.0050785549891638!GO:0051536;iron-sulfur cluster binding;0.0050785549891638!GO:0048522;positive regulation of cellular process;0.0050800009113581!GO:0006302;double-strand break repair;0.00513389142531532!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00513389142531532!GO:0030880;RNA polymerase complex;0.00516785668332721!GO:0045045;secretory pathway;0.00520638734916571!GO:0031418;L-ascorbic acid binding;0.00524741901206936!GO:0004004;ATP-dependent RNA helicase activity;0.00524741901206936!GO:0007243;protein kinase cascade;0.00525459957387533!GO:0008047;enzyme activator activity;0.00534896943831259!GO:0003711;transcription elongation regulator activity;0.00553018363530618!GO:0006509;membrane protein ectodomain proteolysis;0.00554237294113125!GO:0033619;membrane protein proteolysis;0.00554237294113125!GO:0004177;aminopeptidase activity;0.00569107758698303!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00570879872490368!GO:0051052;regulation of DNA metabolic process;0.00592244382686159!GO:0006497;protein amino acid lipidation;0.00597399368447478!GO:0007034;vacuolar transport;0.00608029062229415!GO:0030660;Golgi-associated vesicle membrane;0.00617990408662893!GO:0043488;regulation of mRNA stability;0.0064009566861305!GO:0043487;regulation of RNA stability;0.0064009566861305!GO:0030027;lamellipodium;0.00651021582136199!GO:0040008;regulation of growth;0.00663156841968469!GO:0016126;sterol biosynthetic process;0.00674602282927265!GO:0030134;ER to Golgi transport vesicle;0.00683872419088667!GO:0016408;C-acyltransferase activity;0.00684298236186088!GO:0003690;double-stranded DNA binding;0.00706653542006537!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00714736961208341!GO:0017166;vinculin binding;0.00724272643085484!GO:0030127;COPII vesicle coat;0.00734712241359087!GO:0012507;ER to Golgi transport vesicle membrane;0.00734712241359087!GO:0005869;dynactin complex;0.00745633504149921!GO:0016481;negative regulation of transcription;0.00749869326333791!GO:0000776;kinetochore;0.00775081576674738!GO:0015631;tubulin binding;0.00811254644156269!GO:0006506;GPI anchor biosynthetic process;0.00813848753870916!GO:0008022;protein C-terminus binding;0.00813916422500774!GO:0006595;polyamine metabolic process;0.00815134443886119!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00818027745232726!GO:0031543;peptidyl-proline dioxygenase activity;0.00821277072991673!GO:0016272;prefoldin complex;0.00851196588093272!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00853239806783378!GO:0003746;translation elongation factor activity;0.00856488716911143!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00890615285768784!GO:0005684;U2-dependent spliceosome;0.00907739497575805!GO:0005862;muscle thin filament tropomyosin;0.0091394663365493!GO:0032984;macromolecular complex disassembly;0.00926163973339742!GO:0051128;regulation of cellular component organization and biogenesis;0.00926163973339742!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00953629814958534!GO:0030521;androgen receptor signaling pathway;0.00953629814958534!GO:0043022;ribosome binding;0.00996281206034391!GO:0051287;NAD binding;0.0102549968461818!GO:0000049;tRNA binding;0.0103318856528103!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0104261917173863!GO:0019798;procollagen-proline dioxygenase activity;0.0104313022261512!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0105728302945088!GO:0030659;cytoplasmic vesicle membrane;0.0107182617414782!GO:0000339;RNA cap binding;0.0107882376383038!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0108153552525109!GO:0000428;DNA-directed RNA polymerase complex;0.0108153552525109!GO:0008632;apoptotic program;0.0110118692485865!GO:0005874;microtubule;0.0114948334912717!GO:0000775;chromosome, pericentric region;0.0115105390145789!GO:0042158;lipoprotein biosynthetic process;0.011721890722019!GO:0006352;transcription initiation;0.0118183111321211!GO:0006505;GPI anchor metabolic process;0.0119522506520312!GO:0007264;small GTPase mediated signal transduction;0.0124627876318054!GO:0003684;damaged DNA binding;0.012537271975752!GO:0030125;clathrin vesicle coat;0.0126124863037315!GO:0030665;clathrin coated vesicle membrane;0.0126124863037315!GO:0050662;coenzyme binding;0.0126394272118813!GO:0031901;early endosome membrane;0.012644458467694!GO:0006402;mRNA catabolic process;0.0127710928607495!GO:0003756;protein disulfide isomerase activity;0.0132025447765664!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0132025447765664!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0136561149604542!GO:0007517;muscle development;0.0137742156751548!GO:0043624;cellular protein complex disassembly;0.014045378552826!GO:0005832;chaperonin-containing T-complex;0.0141085565417337!GO:0000082;G1/S transition of mitotic cell cycle;0.0145660393466332!GO:0048144;fibroblast proliferation;0.0146346540569457!GO:0048145;regulation of fibroblast proliferation;0.0146346540569457!GO:0044433;cytoplasmic vesicle part;0.0149326991996651!GO:0043241;protein complex disassembly;0.0150779563453952!GO:0007041;lysosomal transport;0.0151999719681266!GO:0005865;striated muscle thin filament;0.0153306112922019!GO:0006778;porphyrin metabolic process;0.0153306112922019!GO:0033013;tetrapyrrole metabolic process;0.0153306112922019!GO:0030119;AP-type membrane coat adaptor complex;0.0155892638555123!GO:0050811;GABA receptor binding;0.0156804906973602!GO:0007040;lysosome organization and biogenesis;0.0160931682314106!GO:0006354;RNA elongation;0.0161544912901408!GO:0031902;late endosome membrane;0.0163865429213375!GO:0006695;cholesterol biosynthetic process;0.0168866700870624!GO:0031625;ubiquitin protein ligase binding;0.0171014802239286!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0171203996173013!GO:0008243;plasminogen activator activity;0.017556682837075!GO:0030384;phosphoinositide metabolic process;0.0176038918864406!GO:0019752;carboxylic acid metabolic process;0.0179156188856045!GO:0016251;general RNA polymerase II transcription factor activity;0.0180953831996784!GO:0006007;glucose catabolic process;0.0181258429107654!GO:0007033;vacuole organization and biogenesis;0.0181941438618132!GO:0006082;organic acid metabolic process;0.0183720699078897!GO:0048468;cell development;0.01839934156121!GO:0007093;mitotic cell cycle checkpoint;0.0185311657229589!GO:0033673;negative regulation of kinase activity;0.0187010893973979!GO:0006469;negative regulation of protein kinase activity;0.0187010893973979!GO:0009112;nucleobase metabolic process;0.0187500740567618!GO:0043433;negative regulation of transcription factor activity;0.0189318466452291!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0190324658425252!GO:0005856;cytoskeleton;0.0192834036906032!GO:0005801;cis-Golgi network;0.0195584123424249!GO:0005096;GTPase activator activity;0.0195604953167978!GO:0008168;methyltransferase activity;0.0195908450867852!GO:0005657;replication fork;0.0201109860544983!GO:0019206;nucleoside kinase activity;0.020127696729089!GO:0007160;cell-matrix adhesion;0.020225669834404!GO:0007052;mitotic spindle organization and biogenesis;0.02033313911449!GO:0005669;transcription factor TFIID complex;0.0210946439649033!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0213576088605674!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0213576088605674!GO:0006289;nucleotide-excision repair;0.0218397152450291!GO:0006310;DNA recombination;0.0219201254177947!GO:0000209;protein polyubiquitination;0.0221248954983284!GO:0031529;ruffle organization and biogenesis;0.02220417747384!GO:0046519;sphingoid metabolic process;0.0222106266401248!GO:0016741;transferase activity, transferring one-carbon groups;0.0222106266401248!GO:0006643;membrane lipid metabolic process;0.0222209142299038!GO:0006220;pyrimidine nucleotide metabolic process;0.0226558631697841!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0227071421983002!GO:0012506;vesicle membrane;0.022885321130115!GO:0030503;regulation of cell redox homeostasis;0.0231496976551973!GO:0000096;sulfur amino acid metabolic process;0.0231961869082599!GO:0022406;membrane docking;0.0232806984416941!GO:0048278;vesicle docking;0.0232806984416941!GO:0006892;post-Golgi vesicle-mediated transport;0.0232806984416941!GO:0009116;nucleoside metabolic process;0.0234628528565471!GO:0031589;cell-substrate adhesion;0.0234628528565471!GO:0051348;negative regulation of transferase activity;0.023521721265608!GO:0051539;4 iron, 4 sulfur cluster binding;0.0235517283494195!GO:0006118;electron transport;0.0235906798845668!GO:0003678;DNA helicase activity;0.0236633584569129!GO:0008094;DNA-dependent ATPase activity;0.0237005101267226!GO:0016860;intramolecular oxidoreductase activity;0.0237261899964192!GO:0050681;androgen receptor binding;0.0242943245640929!GO:0042168;heme metabolic process;0.0243400895397584!GO:0065007;biological regulation;0.0245566571071455!GO:0006740;NADPH regeneration;0.0249114598180226!GO:0006098;pentose-phosphate shunt;0.0249114598180226!GO:0048146;positive regulation of fibroblast proliferation;0.024914598147237!GO:0046870;cadmium ion binding;0.0250933596567044!GO:0006144;purine base metabolic process;0.0256779482579083!GO:0007021;tubulin folding;0.0257908017513636!GO:0006401;RNA catabolic process;0.0258872146467792!GO:0030131;clathrin adaptor complex;0.0267154942236463!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0267154942236463!GO:0035035;histone acetyltransferase binding;0.0267154942236463!GO:0030032;lamellipodium biogenesis;0.0268132886914964!GO:0030041;actin filament polymerization;0.0269707438137033!GO:0014706;striated muscle development;0.0274244519633373!GO:0031124;mRNA 3'-end processing;0.0280123718078267!GO:0005583;fibrillar collagen;0.0282308933480121!GO:0000030;mannosyltransferase activity;0.0282391642055776!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0290157876977415!GO:0031371;ubiquitin conjugating enzyme complex;0.030316835973507!GO:0022411;cellular component disassembly;0.0318183579293749!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0325987285799876!GO:0005637;nuclear inner membrane;0.0327793179698885!GO:0051098;regulation of binding;0.0328396825149475!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0333216008762272!GO:0007088;regulation of mitosis;0.0333686794600414!GO:0005758;mitochondrial intermembrane space;0.0340806575254946!GO:0006904;vesicle docking during exocytosis;0.0349899898967637!GO:0006611;protein export from nucleus;0.0349899898967637!GO:0031970;organelle envelope lumen;0.0350880051071942!GO:0007030;Golgi organization and biogenesis;0.0351551456071658!GO:0032940;secretion by cell;0.0352573720064711!GO:0005774;vacuolar membrane;0.0354214031171371!GO:0008147;structural constituent of bone;0.0357477022882499!GO:0006672;ceramide metabolic process;0.0361591959953844!GO:0030508;thiol-disulfide exchange intermediate activity;0.0364083800206125!GO:0030833;regulation of actin filament polymerization;0.0378007885844902!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0379475067061509!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0379475067061509!GO:0030518;steroid hormone receptor signaling pathway;0.0383129120847827!GO:0033559;unsaturated fatty acid metabolic process;0.0383142847345719!GO:0006636;unsaturated fatty acid biosynthetic process;0.0383142847345719!GO:0008538;proteasome activator activity;0.0386842643433042!GO:0001872;zymosan binding;0.038732927052271!GO:0001878;response to yeast;0.038732927052271!GO:0006779;porphyrin biosynthetic process;0.038732927052271!GO:0033014;tetrapyrrole biosynthetic process;0.038732927052271!GO:0030911;TPR domain binding;0.0391194320554717!GO:0030149;sphingolipid catabolic process;0.0391814433873965!GO:0006984;ER-nuclear signaling pathway;0.0398620699328343!GO:0009225;nucleotide-sugar metabolic process;0.0400434673909254!GO:0022408;negative regulation of cell-cell adhesion;0.040093032040664!GO:0005784;translocon complex;0.0406610103856784!GO:0032508;DNA duplex unwinding;0.0412928486009038!GO:0032392;DNA geometric change;0.0412928486009038!GO:0006749;glutathione metabolic process;0.0421200714730475!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0422180772221275!GO:0004287;prolyl oligopeptidase activity;0.0433233381165314!GO:0016407;acetyltransferase activity;0.0440046552514712!GO:0000287;magnesium ion binding;0.0443916647084574!GO:0050790;regulation of catalytic activity;0.0443956584477254!GO:0006607;NLS-bearing substrate import into nucleus;0.0448015128643974!GO:0031301;integral to organelle membrane;0.0452252523893941!GO:0051775;response to redox state;0.0456760223617036!GO:0006980;redox signal response;0.0456760223617036!GO:0030145;manganese ion binding;0.0458015431221776!GO:0030433;ER-associated protein catabolic process;0.0458015431221776!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0458015431221776!GO:0045792;negative regulation of cell size;0.0467152858564499!GO:0006790;sulfur metabolic process;0.0482053785886192!GO:0015036;disulfide oxidoreductase activity;0.0485805341532023!GO:0047485;protein N-terminus binding;0.0485929965791066!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0487513784659666!GO:0033043;regulation of organelle organization and biogenesis;0.0487513784659666!GO:0001725;stress fiber;0.049033883226365!GO:0032432;actin filament bundle;0.049033883226365!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.049033883226365
|sample_id=11241
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=skeletal muscle
|top_motifs=NKX3-1:2.34658123597;FOXL1:1.6833986254;NR3C1:1.65381771102;HMGA1,2:1.45161867784;NKX2-2,8:1.35919552312;EVI1:1.27688861522;HIF1A:1.27185581117;AIRE:1.20648741474;XBP1:1.19991772302;POU3F1..4:1.1922834914;ALX4:1.18143578341;HBP1_HMGB_SSRP1_UBTF:1.16018540484;HSF1,2:1.13642962784;GZF1:1.12007405792;IKZF1:1.10383719303;ZNF238:1.09145631516;TAL1_TCF{3,4,12}:1.08062201792;TEAD1:1.07356348367;SRF:1.05406855792;UFEwm:1.00255782903;HOX{A5,B5}:0.912053929674;TBX4,5:0.909598634328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.902220834589;MAFB:0.881638840257;TBP:0.875198143426;MYBL2:0.833430369202;EBF1:0.77473812988;ELK1,4_GABP{A,B1}:0.751564990856;HES1:0.715679300578;GFI1B:0.71417476744;EN1,2:0.685618215115;NANOG{mouse}:0.679841024261;HMX1:0.678010830463;TFCP2:0.664481385814;TFAP4:0.637719477259;PPARG:0.637616588401;KLF4:0.609737836564;ONECUT1,2:0.593695991353;PAX1,9:0.584742994494;NFE2L1:0.579121026488;ATF6:0.555517517192;MTE{core}:0.545823517364;AR:0.51433161236;LHX3,4:0.507427118644;POU1F1:0.503389288659;PAX4:0.494576952125;TLX1..3_NFIC{dimer}:0.492338785601;RXR{A,B,G}:0.491118127712;NRF1:0.490318076068;ZBTB16:0.485981452808;ESR1:0.483902769886;TP53:0.475835054696;TGIF1:0.471430163487;GTF2A1,2:0.470960752885;NHLH1,2:0.470059075113;MEF2{A,B,C,D}:0.46860301019;STAT5{A,B}:0.460986086711;NKX2-1,4:0.460506903618;NFATC1..3:0.449306382816;GCM1,2:0.44926016843;NFE2L2:0.448793985203;bHLH_family:0.448575120858;HOX{A6,A7,B6,B7}:0.446113826648;ARID5B:0.436525496017;TEF:0.423854716523;POU6F1:0.416505456338;ZNF384:0.415070121405;YY1:0.409360723978;PAX5:0.394416196522;ALX1:0.372021216248;HOX{A4,D4}:0.356509368024;T:0.330492718456;GLI1..3:0.304600611187;ZNF143:0.302232964242;RXRA_VDR{dimer}:0.299843849984;PRRX1,2:0.2729665233;NFIX:0.271822743719;MYOD1:0.270931189815;HAND1,2:0.255169127631;LEF1_TCF7_TCF7L1,2:0.247954998677;BACH2:0.205335644345;NKX3-2:0.175614100781;ESRRA:0.166507007643;FOS_FOS{B,L1}_JUN{B,D}:0.163527532853;MAZ:0.156025926823;SOX17:0.137796667862;GATA4:0.13110579294;CDX1,2,4:0.126203050632;HLF:0.104078911638;PAX8:0.0966472089743;MZF1:0.0904491138898;HIC1:0.0888988670198;MTF1:0.0864717141631;ZBTB6:0.0801400798912;CDC5L:0.0645576336942;GFI1:0.0609942949394;DBP:0.0465034633073;SREBF1,2:0.0410891683709;PDX1:0.0117684206439;XCPE1{core}:0.000113813233304;NFE2:-0.00784210330666;DMAP1_NCOR{1,2}_SMARC:-0.0179311954648;SOX5:-0.0209463811732;PAX2:-0.0407712149958;NFIL3:-0.0460277623231;TFAP2B:-0.0480178412032;HNF1A:-0.0510912610307;ADNP_IRX_SIX_ZHX:-0.0641106287564;CEBPA,B_DDIT3:-0.0724841813159;NR5A1,2:-0.0785739637309;ELF1,2,4:-0.0813315804332;GTF2I:-0.082191673157;NR6A1:-0.0945782037454;SPZ1:-0.10081061831;FOSL2:-0.108029965003;ZNF148:-0.109377761607;AHR_ARNT_ARNT2:-0.116620922696;TLX2:-0.118695543047;SMAD1..7,9:-0.120104118389;FOXP3:-0.1278594665;IRF1,2:-0.141968625014;TFDP1:-0.143725605446;FOXM1:-0.158251786413;TFAP2{A,C}:-0.161111398116;E2F1..5:-0.168275476568;IRF7:-0.169797510588;STAT2,4,6:-0.175131474906;FOXO1,3,4:-0.176413162972;ZFP161:-0.184284093453;SP1:-0.195375374417;MYFfamily:-0.197573799541;PRDM1:-0.208230847965;ZIC1..3:-0.210377553575;RUNX1..3:-0.217972522253;LMO2:-0.218120307472;NR1H4:-0.220241676095;MYB:-0.247425611318;CREB1:-0.279184878095;JUN:-0.280070648808;HNF4A_NR2F1,2:-0.283256212195;FOXN1:-0.30366889179;REST:-0.34123182631;EGR1..3:-0.34711932738;STAT1,3:-0.368730678347;RREB1:-0.372657444644;RFX1:-0.377678200184;PAX6:-0.380084411356;SPI1:-0.39006940556;NFY{A,B,C}:-0.396774329093;IKZF2:-0.40073177307;FOXD3:-0.431227961794;FOXA2:-0.438290141241;FOX{I1,J2}:-0.438590036869;NFKB1_REL_RELA:-0.45712004977;TOPORS:-0.474578187598;PATZ1:-0.475557912675;ETS1,2:-0.486122296612;FOXP1:-0.535037171277;MED-1{core}:-0.536266984882;EP300:-0.549712157808;CRX:-0.568320073709;PITX1..3:-0.583209143162;VSX1,2:-0.583753021378;ZNF423:-0.5901876991;PAX3,7:-0.603744722066;OCT4_SOX2{dimer}:-0.623760231665;SPIB:-0.626315816937;NKX2-3_NKX2-5:-0.626544055357;HOXA9_MEIS1:-0.636004855346;SOX{8,9,10}:-0.687233211121;ATF5_CREB3:-0.688507774512;SNAI1..3:-0.702454677501;RFX2..5_RFXANK_RFXAP:-0.709254531963;NKX6-1,2:-0.718955539992;SOX2:-0.731060675152;BPTF:-0.745728445036;FOX{D1,D2}:-0.765925002381;ATF2:-0.785716610509;ATF4:-0.827636997692;GATA6:-0.836683293753;POU5F1:-0.840045043575;RBPJ:-0.841060682726;CUX2:-0.875454479801;NANOG:-0.917141630032;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.943286262595;BREu{core}:-1.08358530122;POU2F1..3:-1.08688585015;ZEB1:-1.12743331185;FOXQ1:-1.18019171829;FOX{F1,F2,J1}:-1.18481569425;RORA:-1.25503520778;PBX1:-1.32619921356
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11241-116D8;search_select_hide=table117:FF:11241-116D8
}}
}}

Latest revision as of 16:27, 3 June 2020

Name:Myoblast, donor1
Species:Human (Homo sapiens)
Library ID:CNhs10870
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskeletal muscle
dev stagefetus
sexfemale
age58
cell typeskeletal muscle myoblast
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberSKM1
catalog numberSC3525
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004887
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10870 CAGE DRX008367 DRR009239
Accession ID Hg19

Library idBAMCTSS
CNhs10870 DRZ000664 DRZ002049
Accession ID Hg38

Library idBAMCTSS
CNhs10870 DRZ012014 DRZ013399
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload

RNA-Seq Accession numbers
MethodSample accession id
sRNA-Seq  SAMD00004887
Library accession numbers

Library idMethodExp. accession idRun accession id
SRhi10009.ATGTCA sRNA-Seq DRX037139 DRR041505
Accession ID Hg19

Library idBAMCTSS
SRhi10009.ATGTCA DRZ007147


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.00358
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.0883
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.269
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.11
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.119
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0178
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.0587
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.348
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.219
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.336
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.272
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.334
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.294
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory-0.00407
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0374
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.0587
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.019
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.0154
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.222
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.157
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0.0587
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.0587
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.157
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.695
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.892
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0.11
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.389
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0.0101
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.61
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10870

Jaspar motifP-value
MA0002.20.478
MA0003.10.888
MA0004.10.704
MA0006.10.533
MA0007.10.0991
MA0009.10.0985
MA0014.10.464
MA0017.10.449
MA0018.22.02598e-4
MA0019.10.299
MA0024.10.0379
MA0025.19.4199e-4
MA0027.10.716
MA0028.10.00221
MA0029.10.356
MA0030.10.00793
MA0031.10.0115
MA0035.20.00272
MA0038.10.487
MA0039.20.847
MA0040.10.986
MA0041.10.992
MA0042.10.717
MA0043.12.36602e-5
MA0046.10.0479
MA0047.20.108
MA0048.10.692
MA0050.10.0105
MA0051.10.433
MA0052.10.0831
MA0055.10.89
MA0057.10.38
MA0058.10.801
MA0059.10.355
MA0060.11.02236e-5
MA0061.10.00756
MA0062.20.687
MA0065.20.126
MA0066.10.511
MA0067.10.0218
MA0068.10.841
MA0069.10.145
MA0070.10.708
MA0071.10.514
MA0072.10.437
MA0073.10.934
MA0074.10.775
MA0076.10.0141
MA0077.10.248
MA0078.10.352
MA0079.20.742
MA0080.21.83327e-7
MA0081.10.19
MA0083.10.00179
MA0084.10.119
MA0087.10.73
MA0088.10.062
MA0090.12.12849e-5
MA0091.10.244
MA0092.10.267
MA0093.10.877
MA0099.20.115
MA0100.10.909
MA0101.15.78582e-5
MA0102.20.0303
MA0103.17.98415e-5
MA0104.20.294
MA0105.10.126
MA0106.10.245
MA0107.11.37591e-4
MA0108.20.0167
MA0111.10.189
MA0112.20.0613
MA0113.10.196
MA0114.10.248
MA0115.10.182
MA0116.10.719
MA0117.10.626
MA0119.10.1
MA0122.10.567
MA0124.10.529
MA0125.10.696
MA0131.10.91
MA0135.10.324
MA0136.12.68323e-6
MA0137.20.976
MA0138.20.405
MA0139.10.481
MA0140.10.205
MA0141.10.88
MA0142.10.0435
MA0143.10.507
MA0144.10.587
MA0145.10.132
MA0146.10.59
MA0147.10.725
MA0148.10.34
MA0149.10.823
MA0150.10.736
MA0152.10.281
MA0153.10.356
MA0154.10.761
MA0155.10.497
MA0156.10.0357
MA0157.10.453
MA0159.10.753
MA0160.10.128
MA0162.10.0866
MA0163.10.332
MA0164.10.965
MA0258.10.47
MA0259.10.0993



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10870

Novel motifP-value
10.509
100.108
1000.755
1010.237
1020.251
1030.106
1040.831
1050.00303
1060.0498
1070.815
1080.475
1090.109
110.613
1100.479
1110.644
1120.629
1130.678
1140.108
1150.354
1160.16
1170.374
1180.579
1190.814
120.776
1200.23
1210.867
1220.0529
1230.00111
1240.0982
1250.462
1260.867
1270.719
1280.0956
1290.946
130.882
1300.462
1310.427
1320.719
1330.0714
1340.0176
1350.367
1360.278
1370.377
1380.22
1390.987
140.0702
1400.0764
1410.316
1420.8
1430.556
1440.793
1450.702
1460.572
1470.0904
1480.754
1490.414
150.878
1500.894
1510.881
1520.0688
1530.844
1540.766
1558.49239e-4
1560.375
1570.0286
1580.0205
1590.27
160.123
1600.746
1610.616
1620.926
1630.391
1640.98
1650.287
1660.724
1670.86
1680.602
1690.159
170.859
180.317
190.16
20.473
200.941
210.0199
220.672
230.956
240.612
250.858
260.682
270.646
280.266
290.593
30.595
300.646
310.601
323.34379e-4
330.877
340.18
350.06
360.00902
370.102
380.587
390.159
40.174
400.0625
410.259
420.591
430.664
440.251
450.105
460.779
470.634
480.65
490.167
50.974
500.408
510.632
520.453
530.0323
540.609
550.344
560.965
570.923
580.147
590.83
60.308
600.233
610.778
620.502
630.447
640.08
650.42
660.557
670.398
680.851
690.497
70.676
700.899
710.359
720.645
730.0024
740.16
750.319
760.92
770.141
780.892
790.465
80.428
800.0952
810.519
820.663
830.632
840.966
850.989
860.919
870.0165
880.545
890.386
90.97
900.636
910.282
920.763
930.975
940.619
950.129
960.697
970.875
980.0905
990.00546



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10870


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000055 (non-terminally differentiated cell)
0000003 (native cell)
0000548 (animal cell)
0000680 (muscle precursor cell)
0002321 (embryonic cell)
0002371 (somatic cell)
0000056 (myoblast)
0000255 (eukaryotic cell)
0000515 (skeletal muscle myoblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0001134 (skeletal muscle tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002036 (striated muscle tissue)
0002385 (muscle tissue)
0010317 (germ layer / neural crest derived structure)
0001015 (musculature)
0002204 (musculoskeletal system)
0000383 (musculature of body)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000164 (human skeletal muscle myoblast sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000355 (multi-potent skeletal muscle stem cell)
CL:0000222 (mesodermal cell)
CL:0000515 (skeletal muscle myoblast)

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