FF:12182-129A4: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=RNA-Seq@SAMD00013682 | ||
|ancestors_in_cell_lineage_facet= | |accession_numbers=CAGE;DRX008534;DRR009406;DRZ000831;DRZ002216;DRZ012181;DRZ013566!RNA-Seq;DRX012356;DRR013804;DRZ003005; | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000178,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0010053,FF:0000004,FF:0000281 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12182-129A4 | |id=FF:12182-129A4 | ||
|is_a=EFO:0002091;;FF:0000002;;FF: | |is_a=EFO:0002091;;FF:0000002;;FF:0000281 | ||
|is_obsolete= | |||
|library_id=CNhs11672!RDhi10003 | |||
|library_id_phase_based=2:CNhs11672 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12182 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12182 | |||
|name=Whole blood (ribopure), donor090612, donation1 | |name=Whole blood (ribopure), donor090612, donation1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11672,LSID808,release008,COMPLETED | |profile_hcage=CNhs11672,LSID808,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0.469147221647532,0.108540960151002,0,0,0,0,-0.160318030086386,0.217081920302005,0.352774892224962,-0.282403560576942,0,0,0,0,0,0,0,0,0,0,0.469147221647532,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0.108540960151002,0,0,0,0,0,0,0.188896114459461,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.469147221647532,0,-0.0192979285307893,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743455919720413,0,0,0,0.03416230627713,0,0,0,0,0,0,-0.258632421002535,0.108540960151002,0,0,-0.0432547497316834,-0.211197402695869,0,0,0.108540960151002,0,0.263115551718392,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0121673662285418,0,0,0,0.0284296166205879,0.328345572868431,0,0,-0.0364132912814638,0,0,0 | |||
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| |||
|rna_box=129 | |rna_box=129 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=8 | |rna_weight_ug=8 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.4599568885516e-253!GO:0043227;membrane-bound organelle;5.30313853468428e-127!GO:0043231;intracellular membrane-bound organelle;8.41338864596037e-127!GO:0005737;cytoplasm;1.9290635632203e-121!GO:0043226;organelle;1.12277258789591e-120!GO:0043229;intracellular organelle;5.22387745433659e-120!GO:0044444;cytoplasmic part;1.24483570132842e-80!GO:0044422;organelle part;4.23601985801795e-69!GO:0044237;cellular metabolic process;3.97285534323975e-68!GO:0044446;intracellular organelle part;7.99688592471876e-68!GO:0043170;macromolecule metabolic process;1.34792582995072e-66!GO:0044238;primary metabolic process;1.02553961361632e-65!GO:0005515;protein binding;2.58474867322869e-62!GO:0032991;macromolecular complex;4.39467429147988e-62!GO:0005634;nucleus;1.98416622821006e-58!GO:0003723;RNA binding;1.37281722593413e-50!GO:0044428;nuclear part;4.8426574172478e-48!GO:0030529;ribonucleoprotein complex;4.21171034166276e-46!GO:0019538;protein metabolic process;1.39680920861775e-44!GO:0015031;protein transport;3.50745517796926e-42!GO:0033036;macromolecule localization;4.43038929865848e-42!GO:0044260;cellular macromolecule metabolic process;2.87446905303751e-41!GO:0044267;cellular protein metabolic process;4.2698936650311e-41!GO:0045184;establishment of protein localization;5.32984406185134e-41!GO:0043283;biopolymer metabolic process;1.28093126376144e-40!GO:0043233;organelle lumen;1.35454813846889e-39!GO:0031974;membrane-enclosed lumen;1.35454813846889e-39!GO:0008104;protein localization;3.15408136064658e-39!GO:0005829;cytosol;1.24389509983584e-35!GO:0006412;translation;1.94782369593333e-35!GO:0010467;gene expression;5.84453054844924e-35!GO:0043234;protein complex;3.01753567175641e-33!GO:0016071;mRNA metabolic process;8.86656260556782e-32!GO:0031981;nuclear lumen;2.38996699267259e-31!GO:0006396;RNA processing;5.24578139456774e-31!GO:0031090;organelle membrane;1.86842128106898e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.88742856041174e-29!GO:0005739;mitochondrion;1.34088000439085e-27!GO:0008380;RNA splicing;3.39955456151433e-27!GO:0006397;mRNA processing;3.45914816168614e-27!GO:0009059;macromolecule biosynthetic process;4.47567518880022e-27!GO:0016043;cellular component organization and biogenesis;8.09543881075718e-26!GO:0046907;intracellular transport;1.98992021873789e-25!GO:0006886;intracellular protein transport;6.66724847704204e-25!GO:0012501;programmed cell death;1.43260140332049e-24!GO:0006915;apoptosis;1.51500346905735e-24!GO:0005840;ribosome;9.71281472893144e-24!GO:0008219;cell death;1.31978699604434e-23!GO:0016265;death;1.31978699604434e-23!GO:0031967;organelle envelope;1.75522284431619e-23!GO:0031975;envelope;3.27042624752676e-23!GO:0044249;cellular biosynthetic process;4.57961830282591e-23!GO:0009058;biosynthetic process;6.80407873945954e-23!GO:0005654;nucleoplasm;6.14997617972015e-22!GO:0044445;cytosolic part;1.01772266266574e-21!GO:0065003;macromolecular complex assembly;1.41655404177932e-21!GO:0003735;structural constituent of ribosome;2.5647203277896e-21!GO:0044429;mitochondrial part;2.84141944920075e-20!GO:0033279;ribosomal subunit;6.90321488566969e-20!GO:0051649;establishment of cellular localization;6.90321488566969e-20!GO:0051641;cellular localization;1.05673248145336e-19!GO:0043412;biopolymer modification;1.7604890502054e-19!GO:0022607;cellular component assembly;6.65685654206637e-19!GO:0005681;spliceosome;6.68286484647164e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.78500448932991e-19!GO:0000166;nucleotide binding;8.35485666150299e-19!GO:0006512;ubiquitin cycle;2.72655908982369e-18!GO:0044451;nucleoplasm part;4.23307867695172e-18!GO:0008134;transcription factor binding;4.50811696187854e-18!GO:0006464;protein modification process;5.34580873997387e-18!GO:0002376;immune system process;5.52438654897944e-18!GO:0003676;nucleic acid binding;3.08668945626169e-17!GO:0016070;RNA metabolic process;3.49425479844504e-17!GO:0042981;regulation of apoptosis;4.30579111793205e-17!GO:0043067;regulation of programmed cell death;6.80712030832317e-17!GO:0044265;cellular macromolecule catabolic process;1.1471691883347e-16!GO:0043687;post-translational protein modification;2.01884829700668e-16!GO:0016192;vesicle-mediated transport;3.48144768938925e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.744092558804e-16!GO:0006119;oxidative phosphorylation;2.50523135300395e-15!GO:0005740;mitochondrial envelope;2.84532404431073e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.35278795182167e-15!GO:0016462;pyrophosphatase activity;3.44476674389741e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;3.68458408745557e-15!GO:0017111;nucleoside-triphosphatase activity;5.64896544173997e-15!GO:0031966;mitochondrial membrane;1.29175864146305e-14!GO:0006996;organelle organization and biogenesis;1.39328388301838e-14!GO:0032553;ribonucleotide binding;1.51843158387461e-14!GO:0032555;purine ribonucleotide binding;1.51843158387461e-14!GO:0016604;nuclear body;3.69898091030377e-14!GO:0007243;protein kinase cascade;4.54123455847221e-14!GO:0006259;DNA metabolic process;4.80045392462422e-14!GO:0016874;ligase activity;4.97481708871602e-14!GO:0019866;organelle inner membrane;7.99035583110906e-14!GO:0017076;purine nucleotide binding;8.82871466281648e-14!GO:0050794;regulation of cellular process;1.2096157005153e-13!GO:0005794;Golgi apparatus;1.64020427117807e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;3.18604657117268e-13!GO:0019941;modification-dependent protein catabolic process;3.78525288196153e-13!GO:0043632;modification-dependent macromolecule catabolic process;3.78525288196153e-13!GO:0022618;protein-RNA complex assembly;5.41891881423965e-13!GO:0006511;ubiquitin-dependent protein catabolic process;6.08978226531505e-13!GO:0044257;cellular protein catabolic process;8.01469902819182e-13!GO:0043285;biopolymer catabolic process;9.41005431557351e-13!GO:0009057;macromolecule catabolic process;1.66841277083327e-12!GO:0016607;nuclear speck;2.52767364958156e-12!GO:0048770;pigment granule;2.6183378901745e-12!GO:0042470;melanosome;2.6183378901745e-12!GO:0006793;phosphorus metabolic process;2.6183378901745e-12!GO:0006796;phosphate metabolic process;2.6183378901745e-12!GO:0005768;endosome;2.68283547868953e-12!GO:0007242;intracellular signaling cascade;3.02791349230911e-12!GO:0006605;protein targeting;3.77556498255152e-12!GO:0005743;mitochondrial inner membrane;3.95764694276199e-12!GO:0051246;regulation of protein metabolic process;4.19633110986085e-12!GO:0006955;immune response;4.82080152970604e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.78269381827272e-12!GO:0006913;nucleocytoplasmic transport;6.91042930506617e-12!GO:0012505;endomembrane system;7.20668611176771e-12!GO:0044248;cellular catabolic process;9.86649101372206e-12!GO:0051169;nuclear transport;1.34387851692692e-11!GO:0003712;transcription cofactor activity;2.39996465733199e-11!GO:0016310;phosphorylation;2.60095742357644e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.94250699518157e-11!GO:0015934;large ribosomal subunit;3.94067601383075e-11!GO:0043069;negative regulation of programmed cell death;6.54345435565006e-11!GO:0005524;ATP binding;9.1754768013883e-11!GO:0043066;negative regulation of apoptosis;1.00922977057831e-10!GO:0032559;adenyl ribonucleotide binding;1.50496940370857e-10!GO:0050789;regulation of biological process;1.63931365865998e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.77294056867549e-10!GO:0051186;cofactor metabolic process;1.86941564540155e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;1.87154874647391e-10!GO:0000375;RNA splicing, via transesterification reactions;1.87154874647391e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.87154874647391e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.40098404615087e-10!GO:0006916;anti-apoptosis;2.82573381864791e-10!GO:0008135;translation factor activity, nucleic acid binding;3.9330824688685e-10!GO:0005773;vacuole;5.69504380892694e-10!GO:0006457;protein folding;8.81860833613136e-10!GO:0030554;adenyl nucleotide binding;8.98740247817105e-10!GO:0065009;regulation of a molecular function;9.01894135533662e-10!GO:0048193;Golgi vesicle transport;9.02279240925874e-10!GO:0048523;negative regulation of cellular process;1.37710720565208e-09!GO:0000502;proteasome complex (sensu Eukaryota);1.48952147915477e-09!GO:0015935;small ribosomal subunit;1.68549242454663e-09!GO:0019787;small conjugating protein ligase activity;1.8746831587703e-09!GO:0008639;small protein conjugating enzyme activity;1.99635518713435e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.31544847277802e-09!GO:0030163;protein catabolic process;2.53435238793653e-09!GO:0019222;regulation of metabolic process;2.699597461728e-09!GO:0004842;ubiquitin-protein ligase activity;4.01756895000121e-09!GO:0005635;nuclear envelope;4.31737764007339e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;5.1021516734272e-09!GO:0044455;mitochondrial membrane part;5.98911847602731e-09!GO:0000323;lytic vacuole;6.68633906759749e-09!GO:0005764;lysosome;6.68633906759749e-09!GO:0065007;biological regulation;6.88387372500312e-09!GO:0006366;transcription from RNA polymerase II promoter;7.40841774379049e-09!GO:0006446;regulation of translational initiation;7.48393638585884e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.45417610076797e-09!GO:0005730;nucleolus;1.00079098261242e-08!GO:0005770;late endosome;1.05405106621771e-08!GO:0006950;response to stress;1.42804972101846e-08!GO:0003713;transcription coactivator activity;1.42899949099693e-08!GO:0016887;ATPase activity;1.48711259009288e-08!GO:0043228;non-membrane-bound organelle;1.77705218161221e-08!GO:0043232;intracellular non-membrane-bound organelle;1.77705218161221e-08!GO:0006323;DNA packaging;1.79459542333307e-08!GO:0005746;mitochondrial respiratory chain;1.90948411336263e-08!GO:0016568;chromatin modification;2.52037724353586e-08!GO:0019829;cation-transporting ATPase activity;3.10573097357091e-08!GO:0003743;translation initiation factor activity;3.14124678166408e-08!GO:0006413;translational initiation;3.66075399297913e-08!GO:0050136;NADH dehydrogenase (quinone) activity;3.74381247461698e-08!GO:0003954;NADH dehydrogenase activity;3.74381247461698e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.74381247461698e-08!GO:0019899;enzyme binding;3.98836615291802e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.35883782705741e-08!GO:0048519;negative regulation of biological process;4.38613765736724e-08!GO:0009259;ribonucleotide metabolic process;5.00531760502158e-08!GO:0016787;hydrolase activity;5.46141597975381e-08!GO:0042623;ATPase activity, coupled;6.16154378488155e-08!GO:0009150;purine ribonucleotide metabolic process;6.28617421614169e-08!GO:0044440;endosomal part;6.79464281553488e-08!GO:0010008;endosome membrane;6.79464281553488e-08!GO:0006417;regulation of translation;8.17713185038468e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.7218044761117e-08!GO:0016881;acid-amino acid ligase activity;1.45515543522468e-07!GO:0006163;purine nucleotide metabolic process;1.45515543522468e-07!GO:0015986;ATP synthesis coupled proton transport;1.69548891331762e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.69548891331762e-07!GO:0031980;mitochondrial lumen;1.72665141955754e-07!GO:0005759;mitochondrial matrix;1.72665141955754e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.76487358610478e-07!GO:0042775;organelle ATP synthesis coupled electron transport;1.78062252273372e-07!GO:0042773;ATP synthesis coupled electron transport;1.78062252273372e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.85292072574522e-07!GO:0043065;positive regulation of apoptosis;1.8549002601036e-07!GO:0031965;nuclear membrane;2.15223495769539e-07!GO:0045321;leukocyte activation;2.5275732759481e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.78936205964531e-07!GO:0017038;protein import;3.1270607185721e-07!GO:0043068;positive regulation of programmed cell death;3.17876832445026e-07!GO:0007264;small GTPase mediated signal transduction;3.61750504257231e-07!GO:0006732;coenzyme metabolic process;3.98326066923712e-07!GO:0009615;response to virus;4.20059522771375e-07!GO:0030964;NADH dehydrogenase complex (quinone);4.52700308046818e-07!GO:0045271;respiratory chain complex I;4.52700308046818e-07!GO:0005747;mitochondrial respiratory chain complex I;4.52700308046818e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.42250867537794e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.42250867537794e-07!GO:0003924;GTPase activity;5.47370570784446e-07!GO:0009199;ribonucleoside triphosphate metabolic process;5.77968932474717e-07!GO:0016563;transcription activator activity;5.99445980027682e-07!GO:0009260;ribonucleotide biosynthetic process;6.16508842702672e-07!GO:0006164;purine nucleotide biosynthetic process;6.45908346020695e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.84292806046456e-07!GO:0006917;induction of apoptosis;6.86819158311033e-07!GO:0046034;ATP metabolic process;7.17067948928705e-07!GO:0031323;regulation of cellular metabolic process;7.31796106898601e-07!GO:0051082;unfolded protein binding;7.97325933239261e-07!GO:0005783;endoplasmic reticulum;8.3122623574302e-07!GO:0031326;regulation of cellular biosynthetic process;8.92191428193935e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;9.2607283635802e-07!GO:0051170;nuclear import;9.59149527200287e-07!GO:0050790;regulation of catalytic activity;1.02704032644899e-06!GO:0012502;induction of programmed cell death;1.11020325798667e-06!GO:0006606;protein import into nucleus;1.31950413444773e-06!GO:0048522;positive regulation of cellular process;1.38489777357407e-06!GO:0006974;response to DNA damage stimulus;1.38489777357407e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.40612186060086e-06!GO:0001775;cell activation;1.42483813628443e-06!GO:0006461;protein complex assembly;1.47165943917068e-06!GO:0051276;chromosome organization and biogenesis;1.61009321941318e-06!GO:0009056;catabolic process;1.63511187130527e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.65801484086703e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.65801484086703e-06!GO:0009141;nucleoside triphosphate metabolic process;1.67613360059684e-06!GO:0006754;ATP biosynthetic process;1.72414438748739e-06!GO:0006753;nucleoside phosphate metabolic process;1.72414438748739e-06!GO:0005525;GTP binding;1.77082577483605e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.78092264829542e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.78092264829542e-06!GO:0060090;molecular adaptor activity;1.82255059722489e-06!GO:0009967;positive regulation of signal transduction;2.09404594819542e-06!GO:0005774;vacuolar membrane;2.35295408632824e-06!GO:0043566;structure-specific DNA binding;2.41018665994774e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.70417844812588e-06!GO:0051188;cofactor biosynthetic process;2.71707226123932e-06!GO:0046649;lymphocyte activation;2.79300697252537e-06!GO:0002764;immune response-regulating signal transduction;2.92813723371599e-06!GO:0008565;protein transporter activity;3.08552355684394e-06!GO:0009889;regulation of biosynthetic process;3.90404775678623e-06!GO:0048518;positive regulation of biological process;4.37908186422215e-06!GO:0044453;nuclear membrane part;4.46909989257232e-06!GO:0008047;enzyme activator activity;4.80276493820302e-06!GO:0007049;cell cycle;4.90830819925139e-06!GO:0005793;ER-Golgi intermediate compartment;5.01420901161547e-06!GO:0032446;protein modification by small protein conjugation;5.02814493696914e-06!GO:0008026;ATP-dependent helicase activity;5.02814493696914e-06!GO:0030097;hemopoiesis;5.04069487109853e-06!GO:0044431;Golgi apparatus part;5.77628244680301e-06!GO:0002757;immune response-activating signal transduction;5.9136614939845e-06!GO:0050657;nucleic acid transport;6.83035537600175e-06!GO:0051236;establishment of RNA localization;6.83035537600175e-06!GO:0050658;RNA transport;6.83035537600175e-06!GO:0015078;hydrogen ion transmembrane transporter activity;7.39724403551419e-06!GO:0005765;lysosomal membrane;8.81319047231162e-06!GO:0006403;RNA localization;9.55046047321325e-06!GO:0044437;vacuolar part;1.00576236597889e-05!GO:0004386;helicase activity;1.00866732015844e-05!GO:0008632;apoptotic program;1.01887280761805e-05!GO:0048475;coated membrane;1.02908675622788e-05!GO:0030117;membrane coat;1.02908675622788e-05!GO:0016567;protein ubiquitination;1.28502894722665e-05!GO:0031902;late endosome membrane;1.28917227327604e-05!GO:0002768;immune response-regulating cell surface receptor signaling pathway;1.3331709436349e-05!GO:0032561;guanyl ribonucleotide binding;1.40630368438611e-05!GO:0019001;guanyl nucleotide binding;1.40630368438611e-05!GO:0010468;regulation of gene expression;1.8241800574031e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.85493274638583e-05!GO:0030218;erythrocyte differentiation;1.97251078254391e-05!GO:0007265;Ras protein signal transduction;2.04606848385068e-05!GO:0001772;immunological synapse;2.31130637087896e-05!GO:0000074;regulation of progression through cell cycle;2.31390783625087e-05!GO:0051726;regulation of cell cycle;2.46712143828813e-05!GO:0030120;vesicle coat;2.55335881627258e-05!GO:0030662;coated vesicle membrane;2.55335881627258e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;2.66783559500472e-05!GO:0004674;protein serine/threonine kinase activity;3.11578053282455e-05!GO:0000151;ubiquitin ligase complex;3.26610865207489e-05!GO:0009117;nucleotide metabolic process;3.41294068724563e-05!GO:0042110;T cell activation;3.41294068724563e-05!GO:0031252;leading edge;3.66816990259798e-05!GO:0002520;immune system development;3.98426376459855e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.09804245496446e-05!GO:0031324;negative regulation of cellular metabolic process;4.30968226066279e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.55578658277727e-05!GO:0006613;cotranslational protein targeting to membrane;4.70864502356376e-05!GO:0003697;single-stranded DNA binding;4.93263089535654e-05!GO:0045786;negative regulation of progression through cell cycle;4.97315167835715e-05!GO:0016197;endosome transport;5.21548469899365e-05!GO:0051336;regulation of hydrolase activity;5.9306540325495e-05!GO:0006333;chromatin assembly or disassembly;5.93402824495867e-05!GO:0016564;transcription repressor activity;6.30914395392242e-05!GO:0000245;spliceosome assembly;6.48072945467737e-05!GO:0005070;SH3/SH2 adaptor activity;7.00768400143145e-05!GO:0044432;endoplasmic reticulum part;7.08576041222988e-05!GO:0051028;mRNA transport;7.21008401141838e-05!GO:0065004;protein-DNA complex assembly;7.31756090708501e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.36219871857433e-05!GO:0006281;DNA repair;7.43871954651887e-05!GO:0005643;nuclear pore;8.07888778679301e-05!GO:0030695;GTPase regulator activity;8.43091797778173e-05!GO:0016740;transferase activity;8.48594582230248e-05!GO:0009892;negative regulation of metabolic process;8.89468775768818e-05!GO:0006888;ER to Golgi vesicle-mediated transport;9.19969555697969e-05!GO:0045259;proton-transporting ATP synthase complex;9.27801710901995e-05!GO:0032940;secretion by cell;9.42648286244414e-05!GO:0051168;nuclear export;9.52732307299054e-05!GO:0006401;RNA catabolic process;0.000107556254020233!GO:0009055;electron carrier activity;0.000117108480305982!GO:0031982;vesicle;0.000118188424495437!GO:0006350;transcription;0.000130744850876367!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000145571259833808!GO:0009607;response to biotic stimulus;0.000146927583423541!GO:0004298;threonine endopeptidase activity;0.00015125471730107!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000152662765725323!GO:0015399;primary active transmembrane transporter activity;0.000152662765725323!GO:0006752;group transfer coenzyme metabolic process;0.000162880921468984!GO:0030532;small nuclear ribonucleoprotein complex;0.000163510848781315!GO:0000139;Golgi membrane;0.00018356652516138!GO:0016044;membrane organization and biogenesis;0.000185102105911624!GO:0042254;ribosome biogenesis and assembly;0.000185102105911624!GO:0030099;myeloid cell differentiation;0.000185349698379275!GO:0009108;coenzyme biosynthetic process;0.000188830871296439!GO:0009060;aerobic respiration;0.000202945712985135!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000224252851059586!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000226580055634414!GO:0043492;ATPase activity, coupled to movement of substances;0.000228973723421791!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000231584140019818!GO:0003724;RNA helicase activity;0.000232748646766852!GO:0018193;peptidyl-amino acid modification;0.00024363790736934!GO:0016481;negative regulation of transcription;0.00024363790736934!GO:0005789;endoplasmic reticulum membrane;0.00026783029818796!GO:0009966;regulation of signal transduction;0.000271297174481488!GO:0048534;hemopoietic or lymphoid organ development;0.00027712151193376!GO:0008270;zinc ion binding;0.00030548398298167!GO:0051251;positive regulation of lymphocyte activation;0.000308650852061546!GO:0005798;Golgi-associated vesicle;0.000336924343862434!GO:0005057;receptor signaling protein activity;0.000340481236205765!GO:0005096;GTPase activator activity;0.000340843210608726!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000342411115598559!GO:0005885;Arp2/3 protein complex;0.000345305477837258!GO:0006612;protein targeting to membrane;0.00035051954157953!GO:0046930;pore complex;0.00038176205504159!GO:0006650;glycerophospholipid metabolic process;0.000386899569930355!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000393492860134321!GO:0050851;antigen receptor-mediated signaling pathway;0.000452429563890995!GO:0005761;mitochondrial ribosome;0.000453386582707767!GO:0000313;organellar ribosome;0.000453386582707767!GO:0046914;transition metal ion binding;0.000465662176554735!GO:0048468;cell development;0.000466908193350182!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000468610563605185!GO:0008654;phospholipid biosynthetic process;0.000486415786829842!GO:0031410;cytoplasmic vesicle;0.000509789126477146!GO:0045045;secretory pathway;0.000537120206350199!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000562294461161183!GO:0006402;mRNA catabolic process;0.000596215987634675!GO:0016301;kinase activity;0.000670556764708343!GO:0042101;T cell receptor complex;0.000791347939454237!GO:0005083;small GTPase regulator activity;0.000810902149811208!GO:0030036;actin cytoskeleton organization and biogenesis;0.000840621590420865!GO:0031988;membrane-bound vesicle;0.000873453070073289!GO:0005769;early endosome;0.000874818794096857!GO:0006099;tricarboxylic acid cycle;0.000884829050752844!GO:0046356;acetyl-CoA catabolic process;0.000884829050752844!GO:0001816;cytokine production;0.000908016056951468!GO:0045333;cellular respiration;0.000911944660906366!GO:0030384;phosphoinositide metabolic process;0.000953650653358504!GO:0009719;response to endogenous stimulus;0.00100016679081983!GO:0015992;proton transport;0.0010549230562613!GO:0043087;regulation of GTPase activity;0.0010549230562613!GO:0006818;hydrogen transport;0.00109040255103252!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00112173305874814!GO:0006468;protein amino acid phosphorylation;0.00112173305874814!GO:0003714;transcription corepressor activity;0.00124576714780257!GO:0000785;chromatin;0.00131195271884983!GO:0042113;B cell activation;0.00143003117504322!GO:0001726;ruffle;0.00149937303992348!GO:0016779;nucleotidyltransferase activity;0.00160028003983467!GO:0065002;intracellular protein transport across a membrane;0.00160491832637841!GO:0007034;vacuolar transport;0.00165351517511903!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00166809146409178!GO:0004812;aminoacyl-tRNA ligase activity;0.00166809146409178!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00166809146409178!GO:0022402;cell cycle process;0.0017546684479781!GO:0008234;cysteine-type peptidase activity;0.00178779616287937!GO:0030041;actin filament polymerization;0.00187807089805396!GO:0016023;cytoplasmic membrane-bound vesicle;0.00197462048177755!GO:0006891;intra-Golgi vesicle-mediated transport;0.00212960301588236!GO:0016363;nuclear matrix;0.00220681386071195!GO:0008186;RNA-dependent ATPase activity;0.00221122262519829!GO:0046822;regulation of nucleocytoplasmic transport;0.00228665521153343!GO:0006611;protein export from nucleus;0.00231278136477552!GO:0051427;hormone receptor binding;0.00231278136477552!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00248519557320273!GO:0030118;clathrin coat;0.00250115202646693!GO:0007050;cell cycle arrest;0.00250284514713839!GO:0043038;amino acid activation;0.0027008632660555!GO:0006418;tRNA aminoacylation for protein translation;0.0027008632660555!GO:0043039;tRNA aminoacylation;0.0027008632660555!GO:0005741;mitochondrial outer membrane;0.00277202606549859!GO:0005667;transcription factor complex;0.00277343048569885!GO:0003729;mRNA binding;0.002788422640422!GO:0051187;cofactor catabolic process;0.00284536778161121!GO:0022890;inorganic cation transmembrane transporter activity;0.00285381206606221!GO:0045449;regulation of transcription;0.0028757301295647!GO:0006084;acetyl-CoA metabolic process;0.00288257300599099!GO:0003690;double-stranded DNA binding;0.00293776339922554!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00294021573461374!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.0030052923990644!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00302422199546851!GO:0008637;apoptotic mitochondrial changes;0.00336240966282268!GO:0003725;double-stranded RNA binding;0.00353494170823271!GO:0008154;actin polymerization and/or depolymerization;0.00362504447205678!GO:0006919;caspase activation;0.00362504447205678!GO:0006643;membrane lipid metabolic process;0.00363887334276344!GO:0030658;transport vesicle membrane;0.00383584316427553!GO:0035257;nuclear hormone receptor binding;0.00387731454003066!GO:0048471;perinuclear region of cytoplasm;0.00399336978316394!GO:0032774;RNA biosynthetic process;0.00402379679225749!GO:0016072;rRNA metabolic process;0.00403525688723927!GO:0005694;chromosome;0.00410424958715053!GO:0006351;transcription, DNA-dependent;0.00412677199734971!GO:0005813;centrosome;0.00414434055944535!GO:0002252;immune effector process;0.00417206834765682!GO:0051090;regulation of transcription factor activity;0.00417206834765682!GO:0050871;positive regulation of B cell activation;0.00417206834765682!GO:0009109;coenzyme catabolic process;0.00417206834765682!GO:0006399;tRNA metabolic process;0.00429471797808657!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00434396969743914!GO:0043281;regulation of caspase activity;0.00463452188601636!GO:0008624;induction of apoptosis by extracellular signals;0.00477433350716927!GO:0051707;response to other organism;0.00490312442078441!GO:0016791;phosphoric monoester hydrolase activity;0.0049645960856425!GO:0048250;mitochondrial iron ion transport;0.00503392473143914!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00515579990734716!GO:0051092;activation of NF-kappaB transcription factor;0.00532013455890482!GO:0006364;rRNA processing;0.00532013455890482!GO:0019867;outer membrane;0.00561143119642969!GO:0004004;ATP-dependent RNA helicase activity;0.00579658651239041!GO:0002443;leukocyte mediated immunity;0.00614204568556687!GO:0002521;leukocyte differentiation;0.00614204568556687!GO:0051252;regulation of RNA metabolic process;0.00618602397924149!GO:0022415;viral reproductive process;0.00624798435489053!GO:0031968;organelle outer membrane;0.00628458611282949!GO:0019904;protein domain specific binding;0.00629836649896231!GO:0006897;endocytosis;0.00631197458422798!GO:0010324;membrane invagination;0.00631197458422798!GO:0043623;cellular protein complex assembly;0.00646205203609951!GO:0007005;mitochondrion organization and biogenesis;0.00659627851734765!GO:0031901;early endosome membrane;0.00720881275395343!GO:0030867;rough endoplasmic reticulum membrane;0.00721543762275216!GO:0030029;actin filament-based process;0.00723941470378054!GO:0007259;JAK-STAT cascade;0.00729270778778156!GO:0043021;ribonucleoprotein binding;0.00735337819928512!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00736408372712392!GO:0002274;myeloid leukocyte activation;0.00737746711728706!GO:0050870;positive regulation of T cell activation;0.00741597560899066!GO:0043280;positive regulation of caspase activity;0.00744923546975833!GO:0030133;transport vesicle;0.00748320863383522!GO:0005637;nuclear inner membrane;0.0077123280798445!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00785279176334364!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00792358010182677!GO:0030518;steroid hormone receptor signaling pathway;0.0080611916900292!GO:0050811;GABA receptor binding;0.00807945931303004!GO:0043506;regulation of JNK activity;0.00812778710906337!GO:0016505;apoptotic protease activator activity;0.00812778710906337!GO:0048500;signal recognition particle;0.00826948689367776!GO:0009893;positive regulation of metabolic process;0.00826948689367776!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00826948689367776!GO:0045576;mast cell activation;0.0083148515450887!GO:0051223;regulation of protein transport;0.00834895110868564!GO:0045892;negative regulation of transcription, DNA-dependent;0.00835456644313032!GO:0045454;cell redox homeostasis;0.0083789550470888!GO:0001819;positive regulation of cytokine production;0.00867432514509631!GO:0044262;cellular carbohydrate metabolic process;0.00873937540535584!GO:0044427;chromosomal part;0.00892788851438803!GO:0004722;protein serine/threonine phosphatase activity;0.00902514133879752!GO:0046474;glycerophospholipid biosynthetic process;0.00914095116616397!GO:0030521;androgen receptor signaling pathway;0.00918536928364651!GO:0042168;heme metabolic process;0.00935415857547257!GO:0030660;Golgi-associated vesicle membrane;0.0094997545108816!GO:0042802;identical protein binding;0.00979012561357986!GO:0030119;AP-type membrane coat adaptor complex;0.0103368911016438!GO:0007041;lysosomal transport;0.0103467126479075!GO:0051338;regulation of transferase activity;0.0103467126479075!GO:0043299;leukocyte degranulation;0.0105334653267179!GO:0032318;regulation of Ras GTPase activity;0.0107269470682915!GO:0043549;regulation of kinase activity;0.0109254832007808!GO:0004185;serine carboxypeptidase activity;0.0110113812463225!GO:0031497;chromatin assembly;0.0112934632963154!GO:0005815;microtubule organizing center;0.0113908475699256!GO:0002440;production of molecular mediator of immune response;0.0113908475699256!GO:0048487;beta-tubulin binding;0.0115429423947654!GO:0050865;regulation of cell activation;0.0117193445221531!GO:0006783;heme biosynthetic process;0.0117200393609653!GO:0019883;antigen processing and presentation of endogenous antigen;0.011798721251823!GO:0001516;prostaglandin biosynthetic process;0.0118147481953175!GO:0046457;prostanoid biosynthetic process;0.0118147481953175!GO:0030131;clathrin adaptor complex;0.0120578078912819!GO:0006644;phospholipid metabolic process;0.0122072983249066!GO:0006778;porphyrin metabolic process;0.0122072983249066!GO:0033013;tetrapyrrole metabolic process;0.0122072983249066!GO:0051920;peroxiredoxin activity;0.0123527351358289!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.012506685409561!GO:0046489;phosphoinositide biosynthetic process;0.0125077451228456!GO:0051249;regulation of lymphocyte activation;0.0125444165216101!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0129823669227611!GO:0001836;release of cytochrome c from mitochondria;0.0131339146154264!GO:0031072;heat shock protein binding;0.0132035536381886!GO:0033116;ER-Golgi intermediate compartment membrane;0.013658512539992!GO:0006914;autophagy;0.013833744580398!GO:0019901;protein kinase binding;0.0138846066313944!GO:0042287;MHC protein binding;0.0140745635140513!GO:0008287;protein serine/threonine phosphatase complex;0.0141777625444745!GO:0006334;nucleosome assembly;0.014222745373545!GO:0031625;ubiquitin protein ligase binding;0.0142790834463541!GO:0043085;positive regulation of catalytic activity;0.0142975191948572!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0145119987205584!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0145119987205584!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0145119987205584!GO:0043300;regulation of leukocyte degranulation;0.0149696468069518!GO:0006968;cellular defense response;0.0150362904247464!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0151375134806539!GO:0045047;protein targeting to ER;0.0151375134806539!GO:0005521;lamin binding;0.0153511237434226!GO:0043488;regulation of mRNA stability;0.0155894984280164!GO:0043487;regulation of RNA stability;0.0155894984280164!GO:0006352;transcription initiation;0.0158323568675908!GO:0008656;caspase activator activity;0.0160169460220665!GO:0005791;rough endoplasmic reticulum;0.0161371555044254!GO:0046467;membrane lipid biosynthetic process;0.0161504279299595!GO:0005099;Ras GTPase activator activity;0.0162781309634277!GO:0051049;regulation of transport;0.0164184065604385!GO:0006355;regulation of transcription, DNA-dependent;0.0170242553059447!GO:0006779;porphyrin biosynthetic process;0.0170242553059447!GO:0033014;tetrapyrrole biosynthetic process;0.0170242553059447!GO:0006607;NLS-bearing substrate import into nucleus;0.0172278810202887!GO:0030258;lipid modification;0.0177367024840164!GO:0000287;magnesium ion binding;0.0181345262401109!GO:0006740;NADPH regeneration;0.018258912835878!GO:0006098;pentose-phosphate shunt;0.018258912835878!GO:0043235;receptor complex;0.0186989425233657!GO:0045859;regulation of protein kinase activity;0.0188211141153094!GO:0051789;response to protein stimulus;0.0189740571179893!GO:0006986;response to unfolded protein;0.0189740571179893!GO:0033157;regulation of intracellular protein transport;0.0192939660079118!GO:0042306;regulation of protein import into nucleus;0.0192939660079118!GO:0043028;caspase regulator activity;0.0195655099865143!GO:0009165;nucleotide biosynthetic process;0.0200231432558865!GO:0051091;positive regulation of transcription factor activity;0.0203285211522736!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0203594374566267!GO:0048821;erythrocyte development;0.0208733481607302!GO:0030522;intracellular receptor-mediated signaling pathway;0.0211798122952137!GO:0006595;polyamine metabolic process;0.0211817107757721!GO:0030674;protein binding, bridging;0.021386533963601!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0214325583230707!GO:0002819;regulation of adaptive immune response;0.0214325583230707!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0216534599670568!GO:0004177;aminopeptidase activity;0.0218989078366943!GO:0006260;DNA replication;0.0222787218803416!GO:0042613;MHC class II protein complex;0.0225945677912618!GO:0006672;ceramide metabolic process;0.0229035153620831!GO:0000118;histone deacetylase complex;0.0230141553869977!GO:0015631;tubulin binding;0.0230474442053908!GO:0046979;TAP2 binding;0.0240694234896259!GO:0046977;TAP binding;0.0240694234896259!GO:0046978;TAP1 binding;0.0240694234896259!GO:0008312;7S RNA binding;0.0242687289911432!GO:0002444;myeloid leukocyte mediated immunity;0.0242914480099947!GO:0019079;viral genome replication;0.0243864933456517!GO:0030027;lamellipodium;0.0243864933456517!GO:0051098;regulation of binding;0.024646842643262!GO:0005484;SNAP receptor activity;0.024646842643262!GO:0050853;B cell receptor signaling pathway;0.0248294806269361!GO:0002218;activation of innate immune response;0.024889539616683!GO:0002758;innate immune response-activating signal transduction;0.024889539616683!GO:0045058;T cell selection;0.024919911605775!GO:0002448;mast cell mediated immunity;0.0250786190871255!GO:0043303;mast cell degranulation;0.0250786190871255!GO:0002682;regulation of immune system process;0.0257182625944775!GO:0019864;IgG binding;0.0257216299380059!GO:0045653;negative regulation of megakaryocyte differentiation;0.0260357847951964!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0260755242290765!GO:0019318;hexose metabolic process;0.0265233818021528!GO:0051345;positive regulation of hydrolase activity;0.0266019802638465!GO:0002467;germinal center formation;0.0266303587414052!GO:0006007;glucose catabolic process;0.026794743857337!GO:0051881;regulation of mitochondrial membrane potential;0.0269275723419369!GO:0016853;isomerase activity;0.0270219669475393!GO:0046983;protein dimerization activity;0.027470207288615!GO:0001817;regulation of cytokine production;0.0275629627375433!GO:0015923;mannosidase activity;0.0283174405718867!GO:0048872;homeostasis of number of cells;0.0286502634623223!GO:0017166;vinculin binding;0.0289880779736326!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0291113394878821!GO:0006376;mRNA splice site selection;0.0292455481801843!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0292455481801843!GO:0019900;kinase binding;0.0295732830809384!GO:0030125;clathrin vesicle coat;0.0306820460509682!GO:0030665;clathrin coated vesicle membrane;0.0306820460509682!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0306820460509682!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0306820460509682!GO:0050727;regulation of inflammatory response;0.0306820460509682!GO:0031347;regulation of defense response;0.0306820460509682!GO:0033367;protein localization in mast cell secretory granule;0.0306820460509682!GO:0033365;protein localization in organelle;0.0306820460509682!GO:0033371;T cell secretory granule organization and biogenesis;0.0306820460509682!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0306820460509682!GO:0033375;protease localization in T cell secretory granule;0.0306820460509682!GO:0042629;mast cell granule;0.0306820460509682!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0306820460509682!GO:0033364;mast cell secretory granule organization and biogenesis;0.0306820460509682!GO:0033380;granzyme B localization in T cell secretory granule;0.0306820460509682!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0306820460509682!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0306820460509682!GO:0033368;protease localization in mast cell secretory granule;0.0306820460509682!GO:0033366;protein localization in secretory granule;0.0306820460509682!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0306820460509682!GO:0033374;protein localization in T cell secretory granule;0.0306820460509682!GO:0019955;cytokine binding;0.0306882759151925!GO:0030100;regulation of endocytosis;0.0306882759151925!GO:0000209;protein polyubiquitination;0.0308989671474427!GO:0046519;sphingoid metabolic process;0.0311932835657637!GO:0030098;lymphocyte differentiation;0.0316579325321539!GO:0022406;membrane docking;0.031666729159247!GO:0048278;vesicle docking;0.031666729159247!GO:0002253;activation of immune response;0.0319344987509018!GO:0006954;inflammatory response;0.0319987862376566!GO:0005996;monosaccharide metabolic process;0.0321234113504142!GO:0048002;antigen processing and presentation of peptide antigen;0.0324978979366818!GO:0006213;pyrimidine nucleoside metabolic process;0.0325399921471425!GO:0005048;signal sequence binding;0.0325399921471425!GO:0016251;general RNA polymerase II transcription factor activity;0.033067763161457!GO:0006952;defense response;0.0330929000073855!GO:0043507;positive regulation of JNK activity;0.0332339109725057!GO:0046456;icosanoid biosynthetic process;0.0337416217526875!GO:0002449;lymphocyte mediated immunity;0.0338227340806114!GO:0045893;positive regulation of transcription, DNA-dependent;0.0340658371971723!GO:0016504;protease activator activity;0.0341452842910273!GO:0032763;regulation of mast cell cytokine production;0.0343959653874224!GO:0032762;mast cell cytokine production;0.0343959653874224!GO:0006904;vesicle docking during exocytosis;0.0344474129736127!GO:0050681;androgen receptor binding;0.0345471950431639!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.034816334735212!GO:0008017;microtubule binding;0.034816334735212!GO:0030132;clathrin coat of coated pit;0.034816334735212!GO:0015036;disulfide oxidoreductase activity;0.0352330763886322!GO:0004672;protein kinase activity;0.0354804665575425!GO:0050863;regulation of T cell activation;0.0354804665575425!GO:0045309;protein phosphorylated amino acid binding;0.0355144834082319!GO:0051050;positive regulation of transport;0.0355879659826409!GO:0035258;steroid hormone receptor binding;0.0357576326916661!GO:0006414;translational elongation;0.0361335436771842!GO:0043304;regulation of mast cell degranulation;0.0361795178276893!GO:0030217;T cell differentiation;0.0362020790699484!GO:0016584;nucleosome positioning;0.0366156011893131!GO:0030176;integral to endoplasmic reticulum membrane;0.036806386318889!GO:0006497;protein amino acid lipidation;0.0368878987727507!GO:0016311;dephosphorylation;0.0369540825806537!GO:0001776;leukocyte homeostasis;0.0371355321755723!GO:0031294;lymphocyte costimulation;0.0382437937041584!GO:0031295;T cell costimulation;0.0382437937041584!GO:0000303;response to superoxide;0.0382482395844518!GO:0019210;kinase inhibitor activity;0.0384355551089524!GO:0006516;glycoprotein catabolic process;0.038555616826669!GO:0008383;manganese superoxide dismutase activity;0.0386236567232042!GO:0001315;age-dependent response to reactive oxygen species;0.0386236567232042!GO:0004718;Janus kinase activity;0.0386515321498462!GO:0019220;regulation of phosphate metabolic process;0.0390296719821141!GO:0051174;regulation of phosphorus metabolic process;0.0390296719821141!GO:0031098;stress-activated protein kinase signaling pathway;0.0390822636807055!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0390973538761646!GO:0002250;adaptive immune response;0.0391257008487992!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0391257008487992!GO:0030127;COPII vesicle coat;0.0391257008487992!GO:0012507;ER to Golgi transport vesicle membrane;0.0391257008487992!GO:0008333;endosome to lysosome transport;0.0391414657263104!GO:0032760;positive regulation of tumor necrosis factor production;0.0392849849577552!GO:0042288;MHC class I protein binding;0.039875377267772!GO:0004197;cysteine-type endopeptidase activity;0.0399428722302496!GO:0019865;immunoglobulin binding;0.0401396333295102!GO:0006405;RNA export from nucleus;0.040677580961841!GO:0042990;regulation of transcription factor import into nucleus;0.040677580961841!GO:0042991;transcription factor import into nucleus;0.040677580961841!GO:0016788;hydrolase activity, acting on ester bonds;0.040746736757365!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0409476600242586!GO:0005684;U2-dependent spliceosome;0.0412901683342364!GO:0047485;protein N-terminus binding;0.0416146694320906!GO:0042108;positive regulation of cytokine biosynthetic process;0.0421343329245561!GO:0031325;positive regulation of cellular metabolic process;0.0424554162207994!GO:0030663;COPI coated vesicle membrane;0.0424599676661957!GO:0030126;COPI vesicle coat;0.0424599676661957!GO:0046578;regulation of Ras protein signal transduction;0.0431075942380542!GO:0030137;COPI-coated vesicle;0.0431075942380542!GO:0050776;regulation of immune response;0.0431075942380542!GO:0004860;protein kinase inhibitor activity;0.0431075942380542!GO:0030134;ER to Golgi transport vesicle;0.0432514377654837!GO:0008286;insulin receptor signaling pathway;0.0436262774468428!GO:0045941;positive regulation of transcription;0.0438498730404029!GO:0017091;AU-rich element binding;0.0442362087319932!GO:0050779;RNA destabilization;0.0442362087319932!GO:0000289;poly(A) tail shortening;0.0442362087319932!GO:0019843;rRNA binding;0.0443608775409207!GO:0006338;chromatin remodeling;0.0444063529537664!GO:0032640;tumor necrosis factor production;0.0444063529537664!GO:0004982;N-formyl peptide receptor activity;0.0450955757191423!GO:0030693;caspase activity;0.0455291834680362!GO:0002377;immunoglobulin production;0.0457889289612116!GO:0005669;transcription factor TFIID complex;0.0466813026165063!GO:0001784;phosphotyrosine binding;0.0467344042317817!GO:0002224;toll-like receptor signaling pathway;0.0472474384381506!GO:0002221;pattern recognition receptor signaling pathway;0.0472474384381506!GO:0000305;response to oxygen radical;0.0474323898160785!GO:0009897;external side of plasma membrane;0.0475764186534837!GO:0031461;cullin-RING ubiquitin ligase complex;0.0478525936895436!GO:0003746;translation elongation factor activity;0.0484304068525068!GO:0019058;viral infectious cycle;0.0486495464074477!GO:0006383;transcription from RNA polymerase III promoter;0.0489935283102037!GO:0042608;T cell receptor binding;0.0492406515191804!GO:0019783;small conjugating protein-specific protease activity;0.0499051571701326 | |||
|sample_id=12182 | |sample_id=12182 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=GATA6:3.69827070413;ETS1,2:2.56663268115;SPI1:2.54037766143;SPIB:2.47721001512;FOXO1,3,4:2.46134004306;ELF1,2,4:2.19542326258;FOX{D1,D2}:2.06513782894;RUNX1..3:1.96312023247;SPZ1:1.96067589421;DMAP1_NCOR{1,2}_SMARC:1.88574610271;T:1.83854832212;STAT1,3:1.79903364146;EP300:1.61305447651;CEBPA,B_DDIT3:1.57029963469;STAT5{A,B}:1.54471361273;FOXD3:1.53160293704;FOX{F1,F2,J1}:1.49198466518;IRF7:1.41051092171;FOXP3:1.35951217636;PAX3,7:1.30498099867;NANOG{mouse}:1.25352599756;FOXN1:1.22290667938;TFAP4:1.14988250836;FOX{I1,J2}:1.14754433036;TLX2:1.09182023882;ZNF148:1.04403555611;POU5F1:1.01506536215;IRF1,2:1.00661175176;NFE2L2:0.983998687196;PAX2:0.927196603228;RXRA_VDR{dimer}:0.921024799314;TGIF1:0.880000685985;RBPJ:0.845776103478;ZNF423:0.844366501262;NFATC1..3:0.811953373175;TFCP2:0.727416090624;IKZF2:0.641394974493;NKX3-2:0.62661443327;NFIL3:0.6138194972;POU2F1..3:0.610478446844;NFIX:0.5913785063;STAT2,4,6:0.564939528806;SMAD1..7,9:0.560782778854;HLF:0.551917893195;HMX1:0.546007475982;ZEB1:0.533617724345;MYFfamily:0.522663070619;NR1H4:0.504309856307;SREBF1,2:0.474308458268;MYOD1:0.45055265826;BPTF:0.412539868868;NR6A1:0.40127686932;TOPORS:0.38437351319;HBP1_HMGB_SSRP1_UBTF:0.334123740894;RREB1:0.313112132327;GATA4:0.312525983688;CDX1,2,4:0.309910339686;ATF5_CREB3:0.301088196717;RFX2..5_RFXANK_RFXAP:0.239609191073;TAL1_TCF{3,4,12}:0.232055970259;NFE2L1:0.231252520717;ALX1:0.226354950983;NFE2:0.220564549037;NFKB1_REL_RELA:0.209486676448;SRF:0.209197687034;MZF1:0.197306647764;NKX3-1:0.185705674033;HOXA9_MEIS1:0.174323533834;CREB1:0.156730550843;BREu{core}:0.135912439128;PDX1:0.114026741196;MAZ:0.110997668452;RORA:0.0876785752046;FOXA2:0.0833119759516;ZNF238:0.0811360988847;LMO2:0.0494130769344;PPARG:0.0436001337247;SNAI1..3:0.0194841299121;CUX2:0.0091134407689;EVI1:-0.0374074256605;MYB:-0.0409491739606;NKX2-2,8:-0.0843476352516;MAFB:-0.118206367967;GLI1..3:-0.172490237898;REST:-0.173281658069;NKX2-1,4:-0.196772418567;POU1F1:-0.218655811744;SP1:-0.23469832494;FOXP1:-0.243121169488;BACH2:-0.309075942987;PAX4:-0.323762582708;OCT4_SOX2{dimer}:-0.329507920318;LEF1_TCF7_TCF7L1,2:-0.33133960185;XCPE1{core}:-0.33251275258;FOSL2:-0.38119169038;ATF2:-0.390919731874;ESR1:-0.391141198576;CRX:-0.403123172755;ALX4:-0.417860502298;DBP:-0.425374068464;ELK1,4_GABP{A,B1}:-0.429736496967;RFX1:-0.439794225619;JUN:-0.469645024563;ZFP161:-0.506851680609;FOS_FOS{B,L1}_JUN{B,D}:-0.507172483094;PRDM1:-0.517243236181;PITX1..3:-0.530852658683;NHLH1,2:-0.542060882797;ADNP_IRX_SIX_ZHX:-0.55004845934;AIRE:-0.557055191181;MEF2{A,B,C,D}:-0.578967808569;NR5A1,2:-0.584047203889;VSX1,2:-0.595968159162;PBX1:-0.604280731352;ATF4:-0.641417688238;NR3C1:-0.657244336924;HNF4A_NR2F1,2:-0.662699159207;ZBTB16:-0.663351669218;MTE{core}:-0.691767987868;TFAP2{A,C}:-0.718241161938;KLF4:-0.721557153138;HIF1A:-0.735082732209;HNF1A:-0.749489738365;PRRX1,2:-0.755345858247;FOXQ1:-0.755829265146;NRF1:-0.797929407339;POU6F1:-0.810175911399;GTF2I:-0.821241936781;PATZ1:-0.840012652366;PAX5:-0.848845404808;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.852835075041;FOXL1:-0.853416371069;NFY{A,B,C}:-0.862695911155;EN1,2:-0.877019952436;AR:-0.89117577318;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.910957760054;ZNF143:-0.921180565845;TFAP2B:-0.971023208008;NKX6-1,2:-0.995306874447;HIC1:-0.996247560379;SOX2:-1.01029774702;PAX8:-1.01779732167;MED-1{core}:-1.02496847997;MTF1:-1.02792753249;EGR1..3:-1.03897303192;TBX4,5:-1.04500898152;NKX2-3_NKX2-5:-1.0804844524;GZF1:-1.08198497344;ARID5B:-1.09084214342;RXR{A,B,G}:-1.10517529156;XBP1:-1.11188693507;HMGA1,2:-1.12152096175;TBP:-1.12775935179;SOX5:-1.16842671919;TLX1..3_NFIC{dimer}:-1.18628446115;ATF6:-1.21465837576;SOX{8,9,10}:-1.27739645257;PAX6:-1.27787636326;NANOG:-1.29589750394;YY1:-1.33032093069;LHX3,4:-1.34350756253;EBF1:-1.35716122379;E2F1..5:-1.36702685626;AHR_ARNT_ARNT2:-1.39160217785;MYBL2:-1.39789634167;GFI1:-1.46511475043;TP53:-1.49680664567;GCM1,2:-1.5333452977;HOX{A6,A7,B6,B7}:-1.57329606164;UFEwm:-1.59347972468;ZIC1..3:-1.60905016721;HOX{A4,D4}:-1.634352628;TEAD1:-1.65531575735;GFI1B:-1.66190706776;GTF2A1,2:-1.70614236199;ZBTB6:-1.73909529112;ESRRA:-1.76063282561;HES1:-1.86147283755;bHLH_family:-1.93525722579;FOXM1:-1.95563028573;HSF1,2:-1.99725551436;POU3F1..4:-2.00787258884;HAND1,2:-2.02496606749;ONECUT1,2:-2.0588916936;PAX1,9:-2.08557192812;HOX{A5,B5}:-2.17166213097;SOX17:-2.18127182542;CDC5L:-2.25068263654;TFDP1:-2.27798069466;ZNF384:-2.37241303206;TEF:-2.48715230231;IKZF1:-2.92537273705 | |top_motifs=GATA6:3.69827070413;ETS1,2:2.56663268115;SPI1:2.54037766143;SPIB:2.47721001512;FOXO1,3,4:2.46134004306;ELF1,2,4:2.19542326258;FOX{D1,D2}:2.06513782894;RUNX1..3:1.96312023247;SPZ1:1.96067589421;DMAP1_NCOR{1,2}_SMARC:1.88574610271;T:1.83854832212;STAT1,3:1.79903364146;EP300:1.61305447651;CEBPA,B_DDIT3:1.57029963469;STAT5{A,B}:1.54471361273;FOXD3:1.53160293704;FOX{F1,F2,J1}:1.49198466518;IRF7:1.41051092171;FOXP3:1.35951217636;PAX3,7:1.30498099867;NANOG{mouse}:1.25352599756;FOXN1:1.22290667938;TFAP4:1.14988250836;FOX{I1,J2}:1.14754433036;TLX2:1.09182023882;ZNF148:1.04403555611;POU5F1:1.01506536215;IRF1,2:1.00661175176;NFE2L2:0.983998687196;PAX2:0.927196603228;RXRA_VDR{dimer}:0.921024799314;TGIF1:0.880000685985;RBPJ:0.845776103478;ZNF423:0.844366501262;NFATC1..3:0.811953373175;TFCP2:0.727416090624;IKZF2:0.641394974493;NKX3-2:0.62661443327;NFIL3:0.6138194972;POU2F1..3:0.610478446844;NFIX:0.5913785063;STAT2,4,6:0.564939528806;SMAD1..7,9:0.560782778854;HLF:0.551917893195;HMX1:0.546007475982;ZEB1:0.533617724345;MYFfamily:0.522663070619;NR1H4:0.504309856307;SREBF1,2:0.474308458268;MYOD1:0.45055265826;BPTF:0.412539868868;NR6A1:0.40127686932;TOPORS:0.38437351319;HBP1_HMGB_SSRP1_UBTF:0.334123740894;RREB1:0.313112132327;GATA4:0.312525983688;CDX1,2,4:0.309910339686;ATF5_CREB3:0.301088196717;RFX2..5_RFXANK_RFXAP:0.239609191073;TAL1_TCF{3,4,12}:0.232055970259;NFE2L1:0.231252520717;ALX1:0.226354950983;NFE2:0.220564549037;NFKB1_REL_RELA:0.209486676448;SRF:0.209197687034;MZF1:0.197306647764;NKX3-1:0.185705674033;HOXA9_MEIS1:0.174323533834;CREB1:0.156730550843;BREu{core}:0.135912439128;PDX1:0.114026741196;MAZ:0.110997668452;RORA:0.0876785752046;FOXA2:0.0833119759516;ZNF238:0.0811360988847;LMO2:0.0494130769344;PPARG:0.0436001337247;SNAI1..3:0.0194841299121;CUX2:0.0091134407689;EVI1:-0.0374074256605;MYB:-0.0409491739606;NKX2-2,8:-0.0843476352516;MAFB:-0.118206367967;GLI1..3:-0.172490237898;REST:-0.173281658069;NKX2-1,4:-0.196772418567;POU1F1:-0.218655811744;SP1:-0.23469832494;FOXP1:-0.243121169488;BACH2:-0.309075942987;PAX4:-0.323762582708;OCT4_SOX2{dimer}:-0.329507920318;LEF1_TCF7_TCF7L1,2:-0.33133960185;XCPE1{core}:-0.33251275258;FOSL2:-0.38119169038;ATF2:-0.390919731874;ESR1:-0.391141198576;CRX:-0.403123172755;ALX4:-0.417860502298;DBP:-0.425374068464;ELK1,4_GABP{A,B1}:-0.429736496967;RFX1:-0.439794225619;JUN:-0.469645024563;ZFP161:-0.506851680609;FOS_FOS{B,L1}_JUN{B,D}:-0.507172483094;PRDM1:-0.517243236181;PITX1..3:-0.530852658683;NHLH1,2:-0.542060882797;ADNP_IRX_SIX_ZHX:-0.55004845934;AIRE:-0.557055191181;MEF2{A,B,C,D}:-0.578967808569;NR5A1,2:-0.584047203889;VSX1,2:-0.595968159162;PBX1:-0.604280731352;ATF4:-0.641417688238;NR3C1:-0.657244336924;HNF4A_NR2F1,2:-0.662699159207;ZBTB16:-0.663351669218;MTE{core}:-0.691767987868;TFAP2{A,C}:-0.718241161938;KLF4:-0.721557153138;HIF1A:-0.735082732209;HNF1A:-0.749489738365;PRRX1,2:-0.755345858247;FOXQ1:-0.755829265146;NRF1:-0.797929407339;POU6F1:-0.810175911399;GTF2I:-0.821241936781;PATZ1:-0.840012652366;PAX5:-0.848845404808;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.852835075041;FOXL1:-0.853416371069;NFY{A,B,C}:-0.862695911155;EN1,2:-0.877019952436;AR:-0.89117577318;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.910957760054;ZNF143:-0.921180565845;TFAP2B:-0.971023208008;NKX6-1,2:-0.995306874447;HIC1:-0.996247560379;SOX2:-1.01029774702;PAX8:-1.01779732167;MED-1{core}:-1.02496847997;MTF1:-1.02792753249;EGR1..3:-1.03897303192;TBX4,5:-1.04500898152;NKX2-3_NKX2-5:-1.0804844524;GZF1:-1.08198497344;ARID5B:-1.09084214342;RXR{A,B,G}:-1.10517529156;XBP1:-1.11188693507;HMGA1,2:-1.12152096175;TBP:-1.12775935179;SOX5:-1.16842671919;TLX1..3_NFIC{dimer}:-1.18628446115;ATF6:-1.21465837576;SOX{8,9,10}:-1.27739645257;PAX6:-1.27787636326;NANOG:-1.29589750394;YY1:-1.33032093069;LHX3,4:-1.34350756253;EBF1:-1.35716122379;E2F1..5:-1.36702685626;AHR_ARNT_ARNT2:-1.39160217785;MYBL2:-1.39789634167;GFI1:-1.46511475043;TP53:-1.49680664567;GCM1,2:-1.5333452977;HOX{A6,A7,B6,B7}:-1.57329606164;UFEwm:-1.59347972468;ZIC1..3:-1.60905016721;HOX{A4,D4}:-1.634352628;TEAD1:-1.65531575735;GFI1B:-1.66190706776;GTF2A1,2:-1.70614236199;ZBTB6:-1.73909529112;ESRRA:-1.76063282561;HES1:-1.86147283755;bHLH_family:-1.93525722579;FOXM1:-1.95563028573;HSF1,2:-1.99725551436;POU3F1..4:-2.00787258884;HAND1,2:-2.02496606749;ONECUT1,2:-2.0588916936;PAX1,9:-2.08557192812;HOX{A5,B5}:-2.17166213097;SOX17:-2.18127182542;CDC5L:-2.25068263654;TFDP1:-2.27798069466;ZNF384:-2.37241303206;TEF:-2.48715230231;IKZF1:-2.92537273705 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12182-129A4;search_select_hide=table117:FF:12182-129A4 | |||
}} | }} | ||
Latest revision as of 18:33, 4 June 2020
| Name: | Whole blood (ribopure), donor090612, donation1 |
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| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11672,RDhi10003 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11672
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11672
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.189 |
| 10 | 10 | 0.0913 |
| 100 | 100 | 0.562 |
| 101 | 101 | 0.359 |
| 102 | 102 | 0.613 |
| 103 | 103 | 0.121 |
| 104 | 104 | 0.818 |
| 105 | 105 | 0.103 |
| 106 | 106 | 0.0483 |
| 107 | 107 | 0.772 |
| 108 | 108 | 0.785 |
| 109 | 109 | 0.0853 |
| 11 | 11 | 0.102 |
| 110 | 110 | 0.345 |
| 111 | 111 | 0.291 |
| 112 | 112 | 0.111 |
| 113 | 113 | 0.174 |
| 114 | 114 | 0.0596 |
| 115 | 115 | 0.258 |
| 116 | 116 | 1 |
| 117 | 117 | 0.0648 |
| 118 | 118 | 0.359 |
| 119 | 119 | 0.452 |
| 12 | 12 | 0.382 |
| 120 | 120 | 0.664 |
| 121 | 121 | 0.648 |
| 122 | 122 | 0.257 |
| 123 | 123 | 0.23 |
| 124 | 124 | 0.0629 |
| 125 | 125 | 0.13 |
| 126 | 126 | 0.187 |
| 127 | 127 | 0.32 |
| 128 | 128 | 0.0469 |
| 129 | 129 | 0.513 |
| 13 | 13 | 0.844 |
| 130 | 130 | 0.965 |
| 131 | 131 | 0.578 |
| 132 | 132 | 0.398 |
| 133 | 133 | 0.859 |
| 134 | 134 | 0.971 |
| 135 | 135 | 0.329 |
| 136 | 136 | 0.99 |
| 137 | 137 | 0.0055 |
| 138 | 138 | 0.0703 |
| 139 | 139 | 0.015 |
| 14 | 14 | 0.186 |
| 140 | 140 | 0.519 |
| 141 | 141 | 0.401 |
| 142 | 142 | 0.984 |
| 143 | 143 | 0.00335 |
| 144 | 144 | 0.937 |
| 145 | 145 | 0.357 |
| 146 | 146 | 0.858 |
| 147 | 147 | 0.232 |
| 148 | 148 | 0.274 |
| 149 | 149 | 0.57 |
| 15 | 15 | 0.0553 |
| 150 | 150 | 0.999 |
| 151 | 151 | 0.263 |
| 152 | 152 | 0.348 |
| 153 | 153 | 0.709 |
| 154 | 154 | 0.969 |
| 155 | 155 | 0.21 |
| 156 | 156 | 0.727 |
| 157 | 157 | 0.348 |
| 158 | 158 | 0.0888 |
| 159 | 159 | 0.3 |
| 16 | 16 | 0.454 |
| 160 | 160 | 0.618 |
| 161 | 161 | 0.459 |
| 162 | 162 | 0.574 |
| 163 | 163 | 0.332 |
| 164 | 164 | 0.282 |
| 165 | 165 | 0.127 |
| 166 | 166 | 0.9 |
| 167 | 167 | 0.783 |
| 168 | 168 | 0.0558 |
| 169 | 169 | 0.0112 |
| 17 | 17 | 0.376 |
| 18 | 18 | 0.375 |
| 19 | 19 | 0.343 |
| 2 | 2 | 0.228 |
| 20 | 20 | 0.596 |
| 21 | 21 | 0.603 |
| 22 | 22 | 0.174 |
| 23 | 23 | 0.0511 |
| 24 | 24 | 0.0707 |
| 25 | 25 | 0.156 |
| 26 | 26 | 0.137 |
| 27 | 27 | 0.0956 |
| 28 | 28 | 0.479 |
| 29 | 29 | 0.477 |
| 3 | 3 | 0.0979 |
| 30 | 30 | 0.858 |
| 31 | 31 | 0.531 |
| 32 | 32 | 0.864 |
| 33 | 33 | 0.549 |
| 34 | 34 | 0.219 |
| 35 | 35 | 0.284 |
| 36 | 36 | 0.418 |
| 37 | 37 | 0.163 |
| 38 | 38 | 0.301 |
| 39 | 39 | 0.996 |
| 4 | 4 | 0.87 |
| 40 | 40 | 0.331 |
| 41 | 41 | 0.0284 |
| 42 | 42 | 0.266 |
| 43 | 43 | 0.144 |
| 44 | 44 | 0.447 |
| 45 | 45 | 0.365 |
| 46 | 46 | 0.132 |
| 47 | 47 | 0.207 |
| 48 | 48 | 0.294 |
| 49 | 49 | 0.138 |
| 5 | 5 | 0.236 |
| 50 | 50 | 0.981 |
| 51 | 51 | 0.405 |
| 52 | 52 | 0.411 |
| 53 | 53 | 0.153 |
| 54 | 54 | 0.252 |
| 55 | 55 | 0.131 |
| 56 | 56 | 0.254 |
| 57 | 57 | 0.721 |
| 58 | 58 | 0.0565 |
| 59 | 59 | 0.0522 |
| 6 | 6 | 0.619 |
| 60 | 60 | 0.0464 |
| 61 | 61 | 0.273 |
| 62 | 62 | 0.0147 |
| 63 | 63 | 0.518 |
| 64 | 64 | 0.393 |
| 65 | 65 | 0.181 |
| 66 | 66 | 0.577 |
| 67 | 67 | 0.208 |
| 68 | 68 | 0.405 |
| 69 | 69 | 0.717 |
| 7 | 7 | 0.14 |
| 70 | 70 | 0.0642 |
| 71 | 71 | 0.114 |
| 72 | 72 | 0.208 |
| 73 | 73 | 0.351 |
| 74 | 74 | 0.822 |
| 75 | 75 | 0.131 |
| 76 | 76 | 0.649 |
| 77 | 77 | 0.644 |
| 78 | 78 | 0.369 |
| 79 | 79 | 0.978 |
| 8 | 8 | 0.501 |
| 80 | 80 | 0.00932 |
| 81 | 81 | 0.37 |
| 82 | 82 | 0.0198 |
| 83 | 83 | 0.518 |
| 84 | 84 | 0.498 |
| 85 | 85 | 0.161 |
| 86 | 86 | 0.119 |
| 87 | 87 | 0.592 |
| 88 | 88 | 0.516 |
| 89 | 89 | 0.217 |
| 9 | 9 | 0.249 |
| 90 | 90 | 0.0296 |
| 91 | 91 | 0.339 |
| 92 | 92 | 0.0719 |
| 93 | 93 | 0.206 |
| 94 | 94 | 0.0828 |
| 95 | 95 | 0.605 |
| 96 | 96 | 0.109 |
| 97 | 97 | 0.776 |
| 98 | 98 | 0.0444 |
| 99 | 99 | 0.447 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11672
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000281 human whole blood sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000178 (blood)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0010053 (human blood - adult sample)
0000004 (tissue sample)
0000281 (human whole blood sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
