Personal tools

FFCP PHASE1:Mm9::chr7:103358449..103358485,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=23966
|EntrezGene=23966
|HGNC=
|HGNC=
|MCL_coexpression_id=1474
|TSSclassifier=NA
|UniProt=D3YVP2
|UniProt=D3YVP2
|association_with_transcript=-170bp_to_ENSMUST00000129445,ENSMUST00000138760_5end
|association_with_transcript=-170bp_to_ENSMUST00000129445,ENSMUST00000138760_5end
|cluster_id=chr7:103358449..103358485,+
|description=CAGE_peak_3_at_Odz4_5end
|description=CAGE_peak_3_at_Odz4_5end
|id=chr7:103358449..103358485,+
|id=chr7:103358449..103358485,+
|ontology_enrichment_celltype=CL:0000117!1.26e-12!23;CL:0000337!1.26e-12!23;CL:0000540!6.50e-07!33;CL:0000047!6.50e-07!33;CL:0000031!6.50e-07!33;CL:0000404!6.50e-07!33
|ontology_enrichment_celltype=CL:0000117!1.26e-12!23;CL:0000337!1.26e-12!23;CL:0000540!6.50e-07!33;CL:0000047!6.50e-07!33;CL:0000031!6.50e-07!33;CL:0000404!6.50e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.79e-14,23;CL:0000337,2.79e-14,23;CL:0000540,7.79e-08,33;CL:0000047,7.79e-08,33;CL:0000031,7.79e-08,33;CL:0000404,7.79e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.44e-19!63;UBERON:0003056!8.63e-19!49;UBERON:0001049!1.31e-17!52;UBERON:0005068!1.31e-17!52;UBERON:0006241!1.31e-17!52;UBERON:0007135!1.31e-17!52;UBERON:0002346!7.94e-17!71;UBERON:0003075!7.94e-17!71;UBERON:0007284!7.94e-17!71;UBERON:0004121!1.09e-16!102;UBERON:0000924!1.09e-16!102;UBERON:0006601!1.09e-16!102;UBERON:0003080!5.65e-16!40;UBERON:0000955!1.29e-15!50;UBERON:0006238!1.29e-15!50;UBERON:0002780!1.91e-15!39;UBERON:0001890!1.91e-15!39;UBERON:0006240!1.91e-15!39;UBERON:0002616!3.52e-15!49;UBERON:0001017!7.19e-15!73;UBERON:0005743!7.19e-15!73;UBERON:0002020!7.25e-15!34;UBERON:0000073!3.02e-14!75;UBERON:0001016!3.02e-14!75;UBERON:0000153!2.74e-12!94;UBERON:0002791!8.71e-12!29;UBERON:0003528!8.71e-12!29;UBERON:0001893!8.71e-12!29;UBERON:0007811!1.27e-10!86;UBERON:0000956!3.20e-09!21;UBERON:0001869!3.20e-09!21;UBERON:0000203!3.20e-09!21;UBERON:0000468!1.74e-08!333;UBERON:0002619!8.70e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.15e-21,73;UBERON:0000073,3.83e-20,54;UBERON:0003056,4.32e-20,49;UBERON:0002346,5.24e-20,64;UBERON:0003075,5.24e-20,64;UBERON:0007284,5.24e-20,64;UBERON:0001049,2.30e-19,52;UBERON:0005068,2.30e-19,52;UBERON:0006241,2.30e-19,52;UBERON:0007135,2.30e-19,52;UBERON:0004121,2.95e-18,95;UBERON:0000924,2.95e-18,95;UBERON:0006601,2.95e-18,95;UBERON:0003080,1.69e-17,40;UBERON:0002780,6.78e-17,39;UBERON:0001890,6.78e-17,39;UBERON:0006240,6.78e-17,39;UBERON:0002020,3.33e-16,34;UBERON:0001017,3.46e-16,73;UBERON:0000955,7.48e-16,47;UBERON:0006238,7.48e-16,47;UBERON:0002616,2.31e-15,46;UBERON:0001016,3.85e-15,75;UBERON:0003528,1.06e-12,29;UBERON:0002791,1.06e-12,29;UBERON:0001893,1.06e-12,29;UBERON:0010314,6.78e-11,92;UBERON:0000956,9.48e-10,21;UBERON:0001869,9.48e-10,21;UBERON:0000203,9.48e-10,21;UBERON:0002619,5.22e-07,17
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,2.87505128729943,0,0,0,0,0,0,5.26022798234954,5.28990979272033,5.07065122804943,0,0,0,0,0,0,0.384218305321555,16.071889907814,12.1505344498522,11.9885227970288,6.28432165688368,4.41737081903227,4.89963196859816,7.18841032636773,9.19218786610021,5.50579404996943,2.17068474744819,3.68655679814984,8.5726087024626,8.41686321142169,11.4600941522487,1.11673199600552,1.12552522006336,2.44477196442896,9.1334861496837,5.83723891276322,5.96478226640962,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,4.3661460130771,0,0,0,0.432982082022428,0,0,0.45673551887624,0,0.445326417194474,1.04091196059682,0.608930956624282,0,0,0.823120949949934,0.753999547978053,0.494389935468748,1.73519228303894,0,0.485300549842228,0.662524555381181,0,0,0.585561594023094,1.25668024088073,0,0,0,0,4.49371918214468,3.20250421973039,5.15182843662744,3.99795936442236,5.62574006126727,3.94797284663164,2.59586020908412,1.42575109390443,0.124406970610093,0,0.841767423545896,3.77349284591841,4.36813998423599,3.06105620669094,3.0140963567143,4.96666443804693,4.74020765053944,3.93547243150861,1.29351685369508,3.44908788692548,7.18603104637713,5.80638709741031,2.41115305670332,2.22437799380478,2.78601733217733,2.88094990971121,4.37875387000685,0,0,0,1.03562886267751,1.40715635988658,0.720248245844059,2.13070262026689,0.196764231747404,0.308534225774757,0.697601834251224,0.804820204198858,0.116765342367169,0.16455984991348,0,0,0,0,0,2.94405927989778,5.86556290561921,0,0,4.05247676016945,5.34144345279009,2.57734922644187,2.01683524623343,1.77902435075896,0.760902504450237,0,0.658795818896044,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0,1.13800740571849,2.05647322697512,3.38123207019241,1.83286195060783,2.71533482034676,1.40271639780637,0.758838445491087,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.786235980452812,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,4.16881105895066,1.30371981153621,1.18821560042632,0.704070744865506,1.50755631697634,1.42826184531608,0.390267295715598,0.788175720530955,1.55025282754142,1.11618338060241,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.551873492609465,2.40825884981688,2.46144541843627,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0.404810701674894,0,0,3.85585579706168,2.2710413633323,2.84904965867608,2.28041743095006,3.29940245945071,0,2.42780636154981,1.209294227859,1.13163047853539,0.590603785761546,3.07435147943927,1.29214146584111,1.81766864738753,0.712994756769443,0.316036757935816,1.05418608574999,0,2.38307724027652,6.30213829109586,2.32845630808958,4.28674070063185,5.49754724291048,2.49716344642899,4.93647061806363,4.26250928760439,0.469343416127421,0,0,2.96795255294664,2.26050197374268,2.83470747162333,3.22305328808468,3.11867709515616,0,3.8939313422207,0,2.27025554759545,1.11116716421827,0,0,0,0,0.139951452323658,0,0,1.89801596148681,2.43983360552218,2.05210147561422,1.25452977608681,0.655087691238533,0.674321731924103,0.826534557253359,1.57053565190418,0,0,0,3.13984746692355,1.65458490457098,3.69457257853691,3.09983576346555,3.71703476079712,3.52071715937262,1.69265700297135,0.734015410979976,0,0,0,2.43270258348197,1.43795340030758,1.68897069871134,1.25318686967237,0.39736270956253,0.360586348559907,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0.38983152295901,0.192423683280659,0.116876902181569,1.81384306892169,0,0,0,0.386379188064381,0.375364950902364,0.549454872801795,4.50173596066038,0,3.3885110557024,9.20650473014354,1.71868654031819,2.92150409984269,2.74033007908257,3.0215755895588,6.07520250208625,8.10578165803597,6.79713613476307,4.14208249401456,1.3492355185943,4.78829848081237,3.75613932659095,4.86213434136588,0.628839487883947,1.2869045591501,2.66696073361938,4.32673620201678,3.20919209591815,2.77966932940177,3.29523089857312,3.2066478035633,3.09016974650612,3.52138338226781,3.50356360629241,4.76293691283074,2.54945517078682,2.89363830695558,1.64834360321323,3.82717192349433,3.42869252385415,3.37204031702741,2.86123427936785,3.34296758254356,2.54095327121393,3.29996970777538,1.64635175585495,2.10455769150274,2.58027816307137,3.92799590160417,3.6776855618494,3.25064791839359,2.04615521584845,2.78886314134739,3.47231899766054,5.49583271463481,3.27504251823572,2.79332370262788,0.382576664137687,0.661774257358546,0.927471342481686
|phase1_expression=4.00372117761985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,2.87505128729943,0,0,0,0,0,0,5.26022798234954,5.28990979272033,5.07065122804943,0,0,0,0,0,0,0.384218305321555,16.071889907814,12.1505344498522,11.9885227970288,6.28432165688368,4.41737081903227,4.89963196859816,7.18841032636773,9.19218786610021,5.50579404996943,2.17068474744819,3.68655679814984,8.5726087024626,8.41686321142169,11.4600941522487,1.11673199600552,1.12552522006336,2.44477196442896,9.1334861496837,5.83723891276322,5.96478226640962,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,4.3661460130771,0,0,0,0.432982082022428,0,0,0.45673551887624,0,0.445326417194474,1.04091196059682,0.608930956624282,0,0,0.823120949949934,0.753999547978053,0.494389935468748,1.73519228303894,0,0.485300549842228,0.662524555381181,0,0,0.585561594023094,1.25668024088073,0,0,0,0,4.49371918214468,3.20250421973039,5.15182843662744,3.99795936442236,5.62574006126727,3.94797284663164,2.59586020908412,1.42575109390443,0.124406970610093,0,0.841767423545896,3.77349284591841,4.36813998423599,3.06105620669094,3.0140963567143,4.96666443804693,4.74020765053944,3.93547243150861,1.29351685369508,3.44908788692548,7.18603104637713,5.80638709741031,2.41115305670332,2.22437799380478,2.78601733217733,2.88094990971121,4.37875387000685,0,0,0,1.03562886267751,1.40715635988658,0.720248245844059,2.13070262026689,0.196764231747404,0.308534225774757,0.697601834251224,0.804820204198858,0.116765342367169,0.16455984991348,0,0,0,0,0,2.94405927989778,5.86556290561921,0,0,4.05247676016945,5.34144345279009,2.57734922644187,2.01683524623343,1.77902435075896,0.760902504450237,0,0.658795818896044,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0,1.13800740571849,2.05647322697512,3.38123207019241,1.83286195060783,2.71533482034676,1.40271639780637,0.758838445491087,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0.786235980452812,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,4.16881105895066,1.30371981153621,1.18821560042632,0.704070744865506,1.50755631697634,1.42826184531608,0.390267295715598,0.788175720530955,1.55025282754142,1.11618338060241,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.551873492609465,2.40825884981688,2.46144541843627,0,0.504941854408746,0.315508219416257,0.390438744296638,0,0,0,0,0.404810701674894,0,0,3.85585579706168,2.2710413633323,2.84904965867608,2.28041743095006,3.29940245945071,0,2.42780636154981,1.209294227859,1.13163047853539,0.590603785761546,3.07435147943927,1.29214146584111,1.81766864738753,0.712994756769443,0.316036757935816,1.05418608574999,0,2.38307724027652,6.30213829109586,2.32845630808958,4.28674070063185,5.49754724291048,2.49716344642899,4.93647061806363,4.26250928760439,0.469343416127421,0,0,2.96795255294664,2.26050197374268,2.83470747162333,3.22305328808468,3.11867709515616,0,3.8939313422207,0,2.27025554759545,1.11116716421827,0,0,0,0,0.139951452323658,0,0,1.89801596148681,2.43983360552218,2.05210147561422,1.25452977608681,0.655087691238533,0.674321731924103,0.826534557253359,1.57053565190418,0,0,0,3.13984746692355,1.65458490457098,3.69457257853691,3.09983576346555,3.71703476079712,3.52071715937262,1.69265700297135,0.734015410979976,0,0,0,2.43270258348197,1.43795340030758,1.68897069871134,1.25318686967237,0.39736270956253,0.360586348559907,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0.38983152295901,0.192423683280659,0.116876902181569,1.81384306892169,0,0,0,0.386379188064381,0.375364950902364,0.549454872801795,4.50173596066038,0,3.3885110557024,9.20650473014354,1.71868654031819,2.92150409984269,2.74033007908257,3.0215755895588,6.07520250208625,8.10578165803597,6.79713613476307,4.14208249401456,1.3492355185943,4.78829848081237,3.75613932659095,4.86213434136588,0.628839487883947,1.2869045591501,2.66696073361938,4.32673620201678,3.20919209591815,2.77966932940177,3.29523089857312,3.2066478035633,3.09016974650612,3.52138338226781,3.50356360629241,4.76293691283074,2.54945517078682,2.89363830695558,1.64834360321323,3.82717192349433,3.42869252385415,3.37204031702741,2.86123427936785,3.34296758254356,2.54095327121393,3.29996970777538,1.64635175585495,2.10455769150274,2.58027816307137,3.92799590160417,3.6776855618494,3.25064791839359,2.04615521584845,2.78886314134739,3.47231899766054,5.49583271463481,3.27504251823572,2.79332370262788,0.382576664137687,0.661774257358546,0.927471342481686
|short_description=p3@Odz4
|short_description=p3@Odz4
}}
}}

Latest revision as of 00:16, 2 October 2015

Short description:p3@Odz4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Odz4_5end
Coexpression cluster:MCL_coexpression_mm9:1474
Association with transcript: -170bp_to_ENSMUST00000129445, ENSMUST00000138760_5end
EntrezGene:Odz4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Odz4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G83.94
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G15.87
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H32.83
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.79e-1423
neuroblast (sensu Vertebrata)2.79e-1423
neuron7.79e-0833
neuronal stem cell7.79e-0833
neuroblast7.79e-0833
electrically signaling cell7.79e-0833

Uber anatomy
Ontology termp-valuen
ecto-epithelium2.15e-2173
regional part of nervous system3.83e-2054
pre-chordal neural plate4.32e-2049
neurectoderm5.24e-2064
neural plate5.24e-2064
presumptive neural plate5.24e-2064
neural tube2.30e-1952
neural rod2.30e-1952
future spinal cord2.30e-1952
neural keel2.30e-1952
ectoderm-derived structure2.95e-1895
ectoderm2.95e-1895
presumptive ectoderm2.95e-1895
anterior neural tube1.69e-1740
regional part of forebrain6.78e-1739
forebrain6.78e-1739
future forebrain6.78e-1739
gray matter3.33e-1634
central nervous system3.46e-1673
brain7.48e-1647
future brain7.48e-1647
regional part of brain2.31e-1546
nervous system3.85e-1575
brain grey matter1.06e-1229
regional part of telencephalon1.06e-1229
telencephalon1.06e-1229
structure with developmental contribution from neural crest6.78e-1192
cerebral cortex9.48e-1021
cerebral hemisphere9.48e-1021
pallium9.48e-1021
regional part of cerebral cortex5.22e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:103358449..103358485,%2B&oldid=4329828"