FFCP PHASE1:Mm9::chr7:125591686..125591741,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110058 | |EntrezGene=110058 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009jjv.1,uc009jjw.1_5end | |association_with_transcript=0bp_to_uc009jjv.1,uc009jjw.1_5end | ||
|cluster_id=chr7:125591686..125591741,- | |||
|description=CAGE_peak_1_at_Syt17_5end | |description=CAGE_peak_1_at_Syt17_5end | ||
|id=chr7:125591686..125591741,- | |id=chr7:125591686..125591741,- | ||
|ontology_enrichment_celltype=CL:0000393!2.02e-12!39;CL:0000211!2.02e-12!39;CL:0000540!4.37e-11!33;CL:0000047!4.37e-11!33;CL:0000031!4.37e-11!33;CL:0000404!4.37e-11!33;CL:0000055!4.98e-11!50;CL:0000221!1.17e-10!44;CL:0000133!1.17e-10!44;CL:0002319!2.65e-10!43 | |ontology_enrichment_celltype=CL:0000393!2.02e-12!39;CL:0000211!2.02e-12!39;CL:0000540!4.37e-11!33;CL:0000047!4.37e-11!33;CL:0000031!4.37e-11!33;CL:0000404!4.37e-11!33;CL:0000055!4.98e-11!50;CL:0000221!1.17e-10!44;CL:0000133!1.17e-10!44;CL:0002319!2.65e-10!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.49e-16,39;CL:0000211,9.49e-16,39;CL:0000540,2.34e-15,33;CL:0000047,2.34e-15,33;CL:0000031,2.34e-15,33;CL:0000404,2.34e-15,33;CL:0000221,5.42e-14,44;CL:0000133,5.42e-14,44;CL:0002319,1.67e-13,43;CL:0000117,2.88e-09,23;CL:0000337,2.88e-09,23;CL:0000107,1.02e-08,9;CL:0002321,5.11e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.30e-18!102;UBERON:0000924!1.30e-18!102;UBERON:0006601!1.30e-18!102;UBERON:0001017!4.85e-17!73;UBERON:0005743!4.85e-17!73;UBERON:0000073!5.86e-16!75;UBERON:0001016!5.86e-16!75;UBERON:0002346!5.09e-15!71;UBERON:0003075!5.09e-15!71;UBERON:0007284!5.09e-15!71;UBERON:0000033!1.26e-08!63;UBERON:0001049!1.89e-08!52;UBERON:0005068!1.89e-08!52;UBERON:0006241!1.89e-08!52;UBERON:0007135!1.89e-08!52;UBERON:0000468!3.59e-08!333;UBERON:0003056!2.24e-07!49;UBERON:0002616!3.15e-07!49;UBERON:0000955!3.46e-07!50;UBERON:0006238!3.46e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.33e-18,73;UBERON:0001016,4.05e-17,75;UBERON:0004121,1.46e-15,95;UBERON:0000924,1.46e-15,95;UBERON:0006601,1.46e-15,95;UBERON:0010314,1.69e-12,92;UBERON:0002346,9.31e-12,64;UBERON:0003075,9.31e-12,64;UBERON:0007284,9.31e-12,64;UBERON:0000073,7.73e-10,54;UBERON:0010371,2.28e-09,73;UBERON:0002410,1.02e-08,9;UBERON:0001049,3.08e-08,52;UBERON:0005068,3.08e-08,52;UBERON:0006241,3.08e-08,52;UBERON:0007135,3.08e-08,52;UBERON:0003056,3.69e-07,49;UBERON:0000489,3.72e-07,21;UBERON:0002420,9.61e-07,8;UBERON:0007245,9.61e-07,8;UBERON:0010009,9.61e-07,8;UBERON:0010011,9.61e-07,8;UBERON:0000454,9.61e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0.760093677825496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,2.43304634926835,0.917733760808408,0,0.436050312760893,1.97717564461025,0.972149495371417,0.419959264876088,1.43752564364972,0,0,0,0.771778308107841,1.43266719969378,1.54701627683233,3.23706337375356,3.1739458756322,1.90149421051854,0,0,0,0,2.1314403448383,2.69640099466564,1.92109152660777,0,0,0.210324961351382,13.4255962669788,7.50953039235486,0.122490799214954,0.0958454710182364,0,3.30347642998166,5.61824287574826,5.68344173048101,1.58263545276233,3.47653045689157,1.56274011167028,7.2587579740359,6.19038871034848,6.41752640662602,8.2496003932627,6.26435395516053,3.35519002485541,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0.649473123033642,0.760079596425296,0,0.68510327831436,0,2.9688427812965,1.90833859442749,2.74018930480927,3.68984795609694,4.52167921657868,2.82212897125692,1.38233250462643,0,0,0,0.323533699894818,0,0,0,0.878342391034642,0.83778682725382,0.766371165625774,0,0,0,2.24685959107234,1.83000241127451,1.7591609295801,1.21677024134594,0.767146371990992,5.61027720310812,5.02947915510049,0.203678727700633,0.124406970610093,0,0.420883711772948,1.56144531555244,1.14951052216736,1.98068342785884,1.35634336052144,2.04109497453984,1.66547836370305,1.12442069471675,0.776110112217047,0.431135985865684,0.567318240503458,0.527853372491847,0,0.556094498451196,0,0.205782136407943,0.796137067273973,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.154267112887378,0.930135779001631,0.804820204198858,0.233530684734339,0.493679549740441,1.80584210487005,0.891756905004413,1.16959989940266,0.219550115291051,1.8788898626452,1.05144974282064,0.514523061896422,0.330418782983798,0.264450566663544,1.2797295032114,1.16118335930219,1.67527699718721,1.21010114774006,0.667134131534611,1.14135375667535,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,1.16978452271472,0.898819408654221,0.432276099749388,0.995706366271836,1.13800740571849,1.71372768914593,0,3.46207257337034,4.26695471768777,2.59502533594179,5.56481526693464,5.60918562322488,5.49495547444812,5.55287237648102,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0.184753190166605,0.947457058852424,0.488894929326078,0.509235257325564,1.17345124144251,1.17254380209271,1.42826184531608,1.36593553500459,0.788175720530955,0.8858587585951,1.2756381492599,1.3109065177259,1.20879487306127,2.02508682014116,0,0,0,0.275936746304732,1.9266070798535,2.57865710502847,0,0.757412781613119,3.15508219416257,3.12350995437311,5.17016154558717,1.91175038362042,3.11918143715352,5.37845408498782,8.50102473517278,7.01414058987149,7.90575555893047,0.642642632843614,0,0,0,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0.775284879504663,1.09060118843252,0,0,0,0,8.5109901438447,1.44048875225048,1.55230420539305,0.643011105094777,1.77340233642274,1.78368817602071,1.64549020602121,2.74018454203139,0,0.21183207086382,0.661585194164886,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.328281799490123,1.45740418314925,1.11255181206306,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,1.26534397432454,1.21991680276109,0.972048067396211,1.04544148007234,1.31017538247707,0.539457385539283,1.1571483801547,0.26175594198403,0.90730481304255,0,0,0.598066184175915,0,1.75006069509643,0.904118764344118,2.36538575687089,0.821500670520278,0.13020438484395,0.314578033277133,0.724752362478018,0.288030006257865,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0,0.453460767230423,1.33191572024439,0.538283139656854,0.671538465456314,0.386379188064381,0.375364950902364,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,1.03111909406213,0.685082519770642,0.755393897389701,0.675022500231806,0,0,0.51776031175182,1.03787347584177,0,0.341467211508268,0.243106717068294,1.25767897576789,1.2869045591501,0.888986911206461,0.824140228955577,1.60459604795908,0.252697211763798,0.760437899670719,0.943131706930381,0.842773567228942,1.21647789569252,0.976402972245426,1.42888107384922,1.39061191133827,0.964546102318525,2.06042950401653,0.735994600671987,0,0.532427418478012,0.715308569841963,0.726732083161643,0.846984423737976,1.01537529470012,1.46342378298218,0.789209134313529,0.950628796921032,0.561142271657738,1.66089025373844,1.0835493061312,0,0.309873682371932,1.15743966588685,2.49810577937946,1.63752125911786,1.07435527024149,0.765153328275374,1.10295709559758,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0.30246421130683,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0.760093677825496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,2.43304634926835,0.917733760808408,0,0.436050312760893,1.97717564461025,0.972149495371417,0.419959264876088,1.43752564364972,0,0,0,0.771778308107841,1.43266719969378,1.54701627683233,3.23706337375356,3.1739458756322,1.90149421051854,0,0,0,0,2.1314403448383,2.69640099466564,1.92109152660777,0,0,0.210324961351382,13.4255962669788,7.50953039235486,0.122490799214954,0.0958454710182364,0,3.30347642998166,5.61824287574826,5.68344173048101,1.58263545276233,3.47653045689157,1.56274011167028,7.2587579740359,6.19038871034848,6.41752640662602,8.2496003932627,6.26435395516053,3.35519002485541,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0.649473123033642,0.760079596425296,0,0.68510327831436,0,2.9688427812965,1.90833859442749,2.74018930480927,3.68984795609694,4.52167921657868,2.82212897125692,1.38233250462643,0,0,0,0.323533699894818,0,0,0,0.878342391034642,0.83778682725382,0.766371165625774,0,0,0,2.24685959107234,1.83000241127451,1.7591609295801,1.21677024134594,0.767146371990992,5.61027720310812,5.02947915510049,0.203678727700633,0.124406970610093,0,0.420883711772948,1.56144531555244,1.14951052216736,1.98068342785884,1.35634336052144,2.04109497453984,1.66547836370305,1.12442069471675,0.776110112217047,0.431135985865684,0.567318240503458,0.527853372491847,0,0.556094498451196,0,0.205782136407943,0.796137067273973,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.154267112887378,0.930135779001631,0.804820204198858,0.233530684734339,0.493679549740441,1.80584210487005,0.891756905004413,1.16959989940266,0.219550115291051,1.8788898626452,1.05144974282064,0.514523061896422,0.330418782983798,0.264450566663544,1.2797295032114,1.16118335930219,1.67527699718721,1.21010114774006,0.667134131534611,1.14135375667535,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,1.16978452271472,0.898819408654221,0.432276099749388,0.995706366271836,1.13800740571849,1.71372768914593,0,3.46207257337034,4.26695471768777,2.59502533594179,5.56481526693464,5.60918562322488,5.49495547444812,5.55287237648102,0,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0.184753190166605,0.947457058852424,0.488894929326078,0.509235257325564,1.17345124144251,1.17254380209271,1.42826184531608,1.36593553500459,0.788175720530955,0.8858587585951,1.2756381492599,1.3109065177259,1.20879487306127,2.02508682014116,0,0,0,0.275936746304732,1.9266070798535,2.57865710502847,0,0.757412781613119,3.15508219416257,3.12350995437311,5.17016154558717,1.91175038362042,3.11918143715352,5.37845408498782,8.50102473517278,7.01414058987149,7.90575555893047,0.642642632843614,0,0,0,0.329940245945071,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0.775284879504663,1.09060118843252,0,0,0,0,8.5109901438447,1.44048875225048,1.55230420539305,0.643011105094777,1.77340233642274,1.78368817602071,1.64549020602121,2.74018454203139,0,0.21183207086382,0.661585194164886,0.16488625294148,0.322928853391811,0.120625849856312,0.238744688006273,0.328281799490123,1.45740418314925,1.11255181206306,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,1.26534397432454,1.21991680276109,0.972048067396211,1.04544148007234,1.31017538247707,0.539457385539283,1.1571483801547,0.26175594198403,0.90730481304255,0,0,0.598066184175915,0,1.75006069509643,0.904118764344118,2.36538575687089,0.821500670520278,0.13020438484395,0.314578033277133,0.724752362478018,0.288030006257865,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0,0.453460767230423,1.33191572024439,0.538283139656854,0.671538465456314,0.386379188064381,0.375364950902364,0,0,0,1.12950368523413,0.920650473014354,1.71868654031819,1.03111909406213,0.685082519770642,0.755393897389701,0.675022500231806,0,0,0.51776031175182,1.03787347584177,0,0.341467211508268,0.243106717068294,1.25767897576789,1.2869045591501,0.888986911206461,0.824140228955577,1.60459604795908,0.252697211763798,0.760437899670719,0.943131706930381,0.842773567228942,1.21647789569252,0.976402972245426,1.42888107384922,1.39061191133827,0.964546102318525,2.06042950401653,0.735994600671987,0,0.532427418478012,0.715308569841963,0.726732083161643,0.846984423737976,1.01537529470012,1.46342378298218,0.789209134313529,0.950628796921032,0.561142271657738,1.66089025373844,1.0835493061312,0,0.309873682371932,1.15743966588685,2.49810577937946,1.63752125911786,1.07435527024149,0.765153328275374,1.10295709559758,0.231867835620421 | ||
|short_description=p1@Syt17 | |short_description=p1@Syt17 | ||
}} | }} |
Latest revision as of 18:58, 25 September 2015
Short description: | p1@Syt17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Syt17_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc009jjv.1, uc009jjw.1_5end |
EntrezGene: | Syt17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.49e-16 | 39 |
electrically active cell | 9.49e-16 | 39 |
neuron | 2.34e-15 | 33 |
neuronal stem cell | 2.34e-15 | 33 |
neuroblast | 2.34e-15 | 33 |
electrically signaling cell | 2.34e-15 | 33 |
ectodermal cell | 5.42e-14 | 44 |
neurectodermal cell | 5.42e-14 | 44 |
neural cell | 1.67e-13 | 43 |
CNS neuron (sensu Vertebrata) | 2.88e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.88e-09 | 23 |
autonomic neuron | 1.02e-08 | 9 |
embryonic cell | 5.11e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.33e-18 | 73 |
nervous system | 4.05e-17 | 75 |
ectoderm-derived structure | 1.46e-15 | 95 |
ectoderm | 1.46e-15 | 95 |
presumptive ectoderm | 1.46e-15 | 95 |
structure with developmental contribution from neural crest | 1.69e-12 | 92 |
neurectoderm | 9.31e-12 | 64 |
neural plate | 9.31e-12 | 64 |
presumptive neural plate | 9.31e-12 | 64 |
regional part of nervous system | 7.73e-10 | 54 |
ecto-epithelium | 2.28e-09 | 73 |
autonomic nervous system | 1.02e-08 | 9 |
neural tube | 3.08e-08 | 52 |
neural rod | 3.08e-08 | 52 |
future spinal cord | 3.08e-08 | 52 |
neural keel | 3.08e-08 | 52 |
pre-chordal neural plate | 3.69e-07 | 49 |
cavitated compound organ | 3.72e-07 | 21 |
basal ganglion | 9.61e-07 | 8 |
nuclear complex of neuraxis | 9.61e-07 | 8 |
aggregate regional part of brain | 9.61e-07 | 8 |
collection of basal ganglia | 9.61e-07 | 8 |
cerebral subcortex | 9.61e-07 | 8 |