FFCP PHASE1:Mm9::chrX:34519665..34519666,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=118 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:34519665..34519666,- | |||
|description=CAGE_peak_at_chrX:34519665..34519666,- | |description=CAGE_peak_at_chrX:34519665..34519666,- | ||
|id=chrX:34519665..34519666,- | |id=chrX:34519665..34519666,- | ||
|ontology_enrichment_celltype=CL:0000838!1.06e-08!12;CL:0000084!4.66e-08!11;CL:0000827!4.66e-08!11;CL:0000542!5.65e-08!13;CL:0000051!5.65e-08!13;CL:0000791!3.86e-07!9;CL:0000789!3.86e-07!9;CL:0002420!3.86e-07!9;CL:0002419!3.86e-07!9;CL:0000790!3.86e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.16e-15,12;CL:0000084,2.14e-14,11;CL:0000827,2.14e-14,11;CL:0000542,3.64e-14,13;CL:0000051,3.64e-14,13;CL:0000791,1.37e-12,9;CL:0000789,1.37e-12,9;CL:0002420,1.37e-12,9;CL:0002419,1.37e-12,9;CL:0000790,1.37e-12,9;CL:0000624,2.31e-11,8;CL:0000738,5.63e-10,17;CL:0002087,5.63e-10,17;CL:0002031,2.92e-09,25;CL:0000893,5.50e-09,6;CL:0002489,5.50e-09,6;CL:0000898,5.50e-09,6;CL:0000809,5.50e-09,6;CL:0000810,5.50e-09,6;CL:0000895,5.50e-09,6;CL:0000808,5.50e-09,6;CL:0000894,5.50e-09,6;CL:0000806,5.50e-09,6;CL:0000807,5.50e-09,6;CL:0000805,5.50e-09,6;CL:0002425,5.50e-09,6;CL:0002436,5.50e-09,6;CL:0002427,5.50e-09,6;CL:0002428,5.50e-09,6;CL:0002429,5.50e-09,6;CL:0002433,5.50e-09,6;CL:0002431,5.50e-09,6;CL:0002432,5.50e-09,6;CL:0000988,3.52e-08,32;CL:0002032,3.52e-08,32;CL:0000037,3.52e-08,32;CL:0000837,3.52e-08,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.25e-12!29;UBERON:0003408!2.87e-12!24;UBERON:0002370!7.58e-12!23;UBERON:0000974!7.58e-12!23;UBERON:0004807!7.58e-12!23;UBERON:0005058!7.58e-12!23;UBERON:0003351!7.58e-12!23;UBERON:0009113!7.58e-12!23;UBERON:0003295!7.58e-12!23;UBERON:0009722!7.58e-12!23;UBERON:0005562!7.58e-12!23;UBERON:0007690!7.58e-12!23;UBERON:0006562!2.69e-11!24;UBERON:0001557!2.69e-11!24;UBERON:0001042!2.69e-11!24;UBERON:0008814!2.69e-11!24;UBERON:0009145!2.69e-11!24;UBERON:0000072!3.12e-09!27;UBERON:0003081!1.75e-08!88;UBERON:0001004!3.73e-08!42;UBERON:0000065!8.77e-08!41;UBERON:0002193!2.13e-07!48;UBERON:0000063!4.58e-07!35;UBERON:0002390!5.18e-07!45;UBERON:0003061!5.18e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,6.01e-25,24;UBERON:0002370,4.08e-24,23;UBERON:0000974,4.08e-24,23;UBERON:0004807,4.08e-24,23;UBERON:0005058,4.08e-24,23;UBERON:0003351,4.08e-24,23;UBERON:0009113,4.08e-24,23;UBERON:0003295,4.08e-24,23;UBERON:0009722,4.08e-24,23;UBERON:0005562,4.08e-24,23;UBERON:0007690,4.08e-24,23;UBERON:0006562,8.39e-23,24;UBERON:0001557,8.39e-23,24;UBERON:0001042,8.39e-23,24;UBERON:0008814,8.39e-23,24;UBERON:0009145,8.39e-23,24;UBERON:0004177,4.15e-21,29;UBERON:0005057,4.15e-21,29;UBERON:0000072,1.86e-19,27;UBERON:0000077,2.84e-19,35;UBERON:0002390,5.22e-16,45;UBERON:0003061,5.22e-16,45;UBERON:0002193,1.00e-15,48;UBERON:0002405,1.00e-15,48;UBERON:0007811,2.35e-15,36;UBERON:0003081,5.88e-14,87;UBERON:0000153,8.27e-14,43;UBERON:0001004,3.43e-12,42;UBERON:0000065,1.66e-11,41;UBERON:0000926,3.61e-11,120;UBERON:0004120,3.61e-11,120;UBERON:0006603,3.61e-11,120;UBERON:0001048,8.45e-07,134 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,2.96983643915625,10.6999428835267,10.0647746318457,2.22583358693156,1.91453181588807,3.93761678841773,5.42006494997784,0.333109761815663,1.01237633694913,0,2.5236973228659,4.2505474417779,0.84877930359606,1.44573593256819,1.29078236561151,2.08959831311148,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0,2.73218193983378,0.971020706062307,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0,0,0,0,3.52343472721246,2.90144856804538,3.36093799142464,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.210324961351382,0,0,0.244981598429908,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.395658863190582,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,1.17851434189467,0.711858403995515,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,2.56652954828636,0,0,0,0.506719730950197,0,0.45673551887624,1.29468941823586,0.29688427812965,0.520455980298408,0,0.461230994512117,1.05505848386836,0.23517741427141,0,0.741584903203122,0,0,0.323533699894818,0.883366073841574,2.42437626567611,0,1.46390398505774,1.25668024088073,0,0.718890747035522,0,1.01656181658452,0.898743836428936,0.915001205637253,1.25654352112864,1.04294592115366,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,0.746441823660558,0,0,0.650602214813519,0,0,0.30140963567143,0.408218994907967,1.0249097622788,0.843315521037559,0,0.646703978798527,0.189106080167819,1.05570674498369,0,0.834141747676794,1.0447564995665,0.411564272815887,0.398068533636986,0,0,1.70498099637356,0.414251545071004,2.34526059981096,0.900310307305074,1.89395788468168,1.77087808572663,1.23413690309903,1.16266972375204,2.68273401399619,0.934122738937356,0.987359099480883,1.47750717671186,0.405344047729279,1.02339991197733,0,0.402619256281115,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.596869416123452,0.19496408711912,0.898819408654221,0,0.398282546508734,0.189667900953082,1.02823661348756,0,0.203651327845314,0,0.280543279561274,0.379419222745544,0.295220295959204,0.31399745568275,0,0,0,0.589676985339609,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0,0.195133647857799,0.472905432318573,1.10732344824387,0.797273843287435,0.655453258862952,0.863424909329478,0.867894351489069,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0.790575555893047,0.642642632843614,0.709700426041343,0,0,0.494910368917606,0,0.242780636154981,0,0.565815239267694,0,0,0,0,0,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.643011105094777,0.709360934569094,0.178368817602071,0.658196082408484,0,1.87737366450968,1.0591603543191,0,0.16488625294148,0.645857706783622,0.422190474497091,0.119372344003136,0.164140899745061,0.874442509889552,0.18542530201051,0.683483523191411,0.619160603889667,0.370389054739423,0.941842285023455,1.0935538217682,1.37266903923914,0.849892149969277,0.419854356970974,1.24379976423981,0,0.632671987162271,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0.523511883968059,0.518459893167171,1.24267862617385,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.938857909166032,1.95306577265925,2.51662426621706,2.41584120826006,1.72818003754719,2.21207784439725,1.82452693761148,1.23253148597793,2.7283372825337,2.32734704367726,3.17890167650024,4.56742708175882,4.43068581523732,4.74542314756294,4.49620159264499,3.42809029465258,6.43222012882366,4.9068039236568,5.37633750035217,0.226730383615211,0,0.358855426437903,0,0.386379188064381,0.375364950902364,0.73260649706906,0,0.501572104035363,1.12950368523413,0,0,2.57779773515531,1.37016503954128,0,0,0.900642406448441,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,1.23621034343337,0.320919209591815,1.01078884705519,0.50695859978048,0.943131706930381,0.561849044819294,0.640251524048693,1.09127391015665,0.952587382566147,0.811190281613988,0.578727661391115,0,1.03039244094078,1.02860775715625,0.354951612318675,0.715308569841963,0.872078499793971,0.658765662907314,0.507687647350059,0.548783918618318,1.57841826862706,0.679020569229309,1.12228454331548,0.830445126869219,0.394017929502254,0.409231043169689,0.929621047115796,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0.695603506861264 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,2.96983643915625,10.6999428835267,10.0647746318457,2.22583358693156,1.91453181588807,3.93761678841773,5.42006494997784,0.333109761815663,1.01237633694913,0,2.5236973228659,4.2505474417779,0.84877930359606,1.44573593256819,1.29078236561151,2.08959831311148,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0,2.73218193983378,0.971020706062307,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0,0,0,0,3.52343472721246,2.90144856804538,3.36093799142464,0,0,0,0,1.05798195854407,0,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0.210324961351382,0,0,0.244981598429908,0.0958454710182364,0,0,0.510749352340751,0.153606533256243,0.395658863190582,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.45839474333043,1.17851434189467,0.711858403995515,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,2.56652954828636,0,0,0,0.506719730950197,0,0.45673551887624,1.29468941823586,0.29688427812965,0.520455980298408,0,0.461230994512117,1.05505848386836,0.23517741427141,0,0.741584903203122,0,0,0.323533699894818,0.883366073841574,2.42437626567611,0,1.46390398505774,1.25668024088073,0,0.718890747035522,0,1.01656181658452,0.898743836428936,0.915001205637253,1.25654352112864,1.04294592115366,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,0.746441823660558,0,0,0.650602214813519,0,0,0.30140963567143,0.408218994907967,1.0249097622788,0.843315521037559,0,0.646703978798527,0.189106080167819,1.05570674498369,0,0.834141747676794,1.0447564995665,0.411564272815887,0.398068533636986,0,0,1.70498099637356,0.414251545071004,2.34526059981096,0.900310307305074,1.89395788468168,1.77087808572663,1.23413690309903,1.16266972375204,2.68273401399619,0.934122738937356,0.987359099480883,1.47750717671186,0.405344047729279,1.02339991197733,0,0.402619256281115,0.630869845692382,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.596869416123452,0.19496408711912,0.898819408654221,0,0.398282546508734,0.189667900953082,1.02823661348756,0,0.203651327845314,0,0.280543279561274,0.379419222745544,0.295220295959204,0.31399745568275,0,0,0,0.589676985339609,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0,0.195133647857799,0.472905432318573,1.10732344824387,0.797273843287435,0.655453258862952,0.863424909329478,0.867894351489069,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0.790575555893047,0.642642632843614,0.709700426041343,0,0,0.494910368917606,0,0.242780636154981,0,0.565815239267694,0,0,0,0,0,0.632073515871632,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.643011105094777,0.709360934569094,0.178368817602071,0.658196082408484,0,1.87737366450968,1.0591603543191,0,0.16488625294148,0.645857706783622,0.422190474497091,0.119372344003136,0.164140899745061,0.874442509889552,0.18542530201051,0.683483523191411,0.619160603889667,0.370389054739423,0.941842285023455,1.0935538217682,1.37266903923914,0.849892149969277,0.419854356970974,1.24379976423981,0,0.632671987162271,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.330613822901344,0.523511883968059,0.518459893167171,1.24267862617385,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.938857909166032,1.95306577265925,2.51662426621706,2.41584120826006,1.72818003754719,2.21207784439725,1.82452693761148,1.23253148597793,2.7283372825337,2.32734704367726,3.17890167650024,4.56742708175882,4.43068581523732,4.74542314756294,4.49620159264499,3.42809029465258,6.43222012882366,4.9068039236568,5.37633750035217,0.226730383615211,0,0.358855426437903,0,0.386379188064381,0.375364950902364,0.73260649706906,0,0.501572104035363,1.12950368523413,0,0,2.57779773515531,1.37016503954128,0,0,0.900642406448441,0.453142408984205,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,1.23621034343337,0.320919209591815,1.01078884705519,0.50695859978048,0.943131706930381,0.561849044819294,0.640251524048693,1.09127391015665,0.952587382566147,0.811190281613988,0.578727661391115,0,1.03039244094078,1.02860775715625,0.354951612318675,0.715308569841963,0.872078499793971,0.658765662907314,0.507687647350059,0.548783918618318,1.57841826862706,0.679020569229309,1.12228454331548,0.830445126869219,0.394017929502254,0.409231043169689,0.929621047115796,0.192906610981141,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0.695603506861264 | ||
|short_description=p@chrX:34519665..34519666,- | |short_description=p@chrX:34519665..34519666,- | ||
}} | }} |
Latest revision as of 06:10, 6 August 2015
Short description: | p@chrX:34519665..34519666, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:34519665..34519666, - |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gland of gut | 6.01e-25 | 24 |
thymus | 4.08e-24 | 23 |
neck | 4.08e-24 | 23 |
respiratory system epithelium | 4.08e-24 | 23 |
hemolymphoid system gland | 4.08e-24 | 23 |
pharyngeal epithelium | 4.08e-24 | 23 |
thymic region | 4.08e-24 | 23 |
pharyngeal gland | 4.08e-24 | 23 |
entire pharyngeal arch endoderm | 4.08e-24 | 23 |
thymus primordium | 4.08e-24 | 23 |
early pharyngeal endoderm | 4.08e-24 | 23 |
pharynx | 8.39e-23 | 24 |
upper respiratory tract | 8.39e-23 | 24 |
chordate pharynx | 8.39e-23 | 24 |
pharyngeal arch system | 8.39e-23 | 24 |
pharyngeal region of foregut | 8.39e-23 | 24 |
hemopoietic organ | 4.15e-21 | 29 |
immune organ | 4.15e-21 | 29 |
segment of respiratory tract | 1.86e-19 | 27 |
mixed endoderm/mesoderm-derived structure | 2.84e-19 | 35 |
hematopoietic system | 5.22e-16 | 45 |
blood island | 5.22e-16 | 45 |
hemolymphoid system | 1.00e-15 | 48 |
immune system | 1.00e-15 | 48 |
craniocervical region | 2.35e-15 | 36 |
lateral plate mesoderm | 5.88e-14 | 87 |
anterior region of body | 8.27e-14 | 43 |
respiratory system | 3.43e-12 | 42 |
respiratory tract | 1.66e-11 | 41 |
mesoderm | 3.61e-11 | 120 |
mesoderm-derived structure | 3.61e-11 | 120 |
presumptive mesoderm | 3.61e-11 | 120 |
primordium | 8.45e-07 | 134 |