FFCP PHASE1:Mm9::chr19:47036426..47036462,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47036426..47036462,- | |||
|description=CAGE_peak_at_chr19:47036426..47036462,- | |description=CAGE_peak_at_chr19:47036426..47036462,- | ||
|id=chr19:47036426..47036462,- | |id=chr19:47036426..47036462,- | ||
|ontology_enrichment_celltype=CL:0000117!4.64e-08!23;CL:0000337!4.64e-08!23 | |ontology_enrichment_celltype=CL:0000117!4.64e-08!23;CL:0000337!4.64e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-14,23;CL:0000337,1.05e-14,23;CL:0002613,6.01e-12,3;CL:0002612,1.00e-11,3;CL:0000540,9.54e-10,33;CL:0000047,9.54e-10,33;CL:0000031,9.54e-10,33;CL:0000404,9.54e-10,33;CL:0000393,5.42e-08,39;CL:0000211,5.42e-08,39;CL:0002319,4.27e-07,43;CL:0000221,6.74e-07,44;CL:0000133,6.74e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.15e-12!71;UBERON:0003075!5.15e-12!71;UBERON:0007284!5.15e-12!71;UBERON:0001049!3.99e-09!52;UBERON:0005068!3.99e-09!52;UBERON:0006241!3.99e-09!52;UBERON:0007135!3.99e-09!52;UBERON:0001017!2.55e-08!73;UBERON:0005743!2.55e-08!73;UBERON:0004121!5.45e-08!102;UBERON:0000924!5.45e-08!102;UBERON:0006601!5.45e-08!102;UBERON:0003056!8.28e-08!49;UBERON:0000073!8.97e-08!75;UBERON:0001016!8.97e-08!75;UBERON:0000033!5.02e-07!63;UBERON:0003080!5.60e-07!40;UBERON:0002780!9.42e-07!39;UBERON:0001890!9.42e-07!39;UBERON:0006240!9.42e-07!39 | |ontology_enrichment_uberon=UBERON:0002346!5.15e-12!71;UBERON:0003075!5.15e-12!71;UBERON:0007284!5.15e-12!71;UBERON:0001049!3.99e-09!52;UBERON:0005068!3.99e-09!52;UBERON:0006241!3.99e-09!52;UBERON:0007135!3.99e-09!52;UBERON:0001017!2.55e-08!73;UBERON:0005743!2.55e-08!73;UBERON:0004121!5.45e-08!102;UBERON:0000924!5.45e-08!102;UBERON:0006601!5.45e-08!102;UBERON:0003056!8.28e-08!49;UBERON:0000073!8.97e-08!75;UBERON:0001016!8.97e-08!75;UBERON:0000033!5.02e-07!63;UBERON:0003080!5.60e-07!40;UBERON:0002780!9.42e-07!39;UBERON:0001890!9.42e-07!39;UBERON:0006240!9.42e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.49e-13,34;UBERON:0001948,2.48e-12,5;UBERON:0002315,2.48e-12,5;UBERON:0000369,2.65e-12,5;UBERON:0002435,2.65e-12,5;UBERON:0000204,2.65e-12,5;UBERON:0010082,2.65e-12,5;UBERON:0002257,1.00e-11,3;UBERON:0002420,1.42e-11,8;UBERON:0007245,1.42e-11,8;UBERON:0010009,1.42e-11,8;UBERON:0010011,1.42e-11,8;UBERON:0000454,1.42e-11,8;UBERON:0002240,2.68e-10,6;UBERON:0005174,2.68e-10,6;UBERON:0001137,2.68e-10,6;UBERON:0001049,1.27e-09,52;UBERON:0005068,1.27e-09,52;UBERON:0006241,1.27e-09,52;UBERON:0007135,1.27e-09,52;UBERON:0000073,3.51e-09,54;UBERON:0001017,1.27e-08,73;UBERON:0001016,2.55e-08,75;UBERON:0002346,2.21e-07,64;UBERON:0003075,2.21e-07,64;UBERON:0007284,2.21e-07,64;UBERON:0003528,5.29e-07,29;UBERON:0002791,5.29e-07,29;UBERON:0001893,5.29e-07,29 | |||
|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0.16787927191189,0,0.387369970324729,0.140788722151667,0,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0,0,9.35476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,3.52938892818609,2.73218193983378,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0.58328969722285,0.419959264876088,0,0,0.725362142011344,0.336093799142464,0,0.286533439938757,0.515672092277442,1.21389876515759,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.270011876663381,0.210324961351382,0.285650984403804,3.3130281142742,0.61245399607477,0.479227355091182,0.919218786610021,0,0.255374676170375,0.307213066512487,1.18697658957174,2.37867873366265,2.08365348222704,0.279182999001381,0.56276261003168,1.22238598221448,1.17851434189467,1.85083185038834,1.67759501242771,0.075726193333184,0,0.289864488701678,0,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0.216491041011214,1.26679932737549,0,0.5709193985953,0,0.445326417194474,0.693941307064543,0.913396434936424,0,0.753613202763113,0.587943535678524,0.125666591329675,0.741584903203122,0,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0.381210681219194,0.449371918214468,0,1.38219787324151,0.347648640384553,0.511430914660661,0,0.811206315338788,0.509196819251581,0.124406970610093,1.0108910337347,0,0.130120442962704,0.229902104433473,0.900310649026746,0.90422890701429,0.408218994907967,0.640568601424249,0.374806898238915,0.258703370739016,0.646703978798527,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.823128545631774,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.703578179943289,0.540186184383045,0,0.196764231747404,0.771335564436891,0.232533944750408,0.536546802799238,0,0.16455984991348,0,0.243206428637567,0.292399974850665,0,0.134206418760372,0.630869845692382,1.23485534855141,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.799739588268102,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0,0.318909537314974,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0,0,0,0,0,0.321321316421807,0.141940085208269,0.534196811001766,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0.340439605753788,0.540183282093931,0.258717367565509,1.07168517515796,0.532020700926821,0.713475270408282,0.658196082408484,0.608929898229199,0,0.21183207086382,0.441056796109924,0,0.322928853391811,0.120625849856312,0,0,0,0.556275906031529,0,0.619160603889667,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0.316335993581135,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.495920734352016,0,0.129614973291793,0,38.8948127692091,0.448549638131936,0.330916980914195,0.583353565032143,0.774958940866387,1.01373675294467,0.352071715937262,0.2604087696879,0.734015410979976,11.8376219204743,26.2107305694658,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0.116876902181569,0,0.443971906748129,0.269141569828427,0,0.19318959403219,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0,0,0,1.03552062350364,0.415149390336707,0,0.170733605754134,0.729320151204882,0.419226325255965,0,0.222246727801615,0,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.34461281373368,0,0.927074607558844,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0,0.290692833264657,0.376437521661322,0.592302255241736,0.73171189149109,0.263069711437843,0.407412341537585,0,0.355905054372522,0.492522411877817,0,0.929621047115796,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0,0.220591419119515,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0.16787927191189,0,0.387369970324729,0.140788722151667,0,0,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0,0,9.35476191661768,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,3.52938892818609,2.73218193983378,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0,0.58328969722285,0.419959264876088,0,0,0.725362142011344,0.336093799142464,0,0.286533439938757,0.515672092277442,1.21389876515759,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.414758449233911,0.270011876663381,0.210324961351382,0.285650984403804,3.3130281142742,0.61245399607477,0.479227355091182,0.919218786610021,0,0.255374676170375,0.307213066512487,1.18697658957174,2.37867873366265,2.08365348222704,0.279182999001381,0.56276261003168,1.22238598221448,1.17851434189467,1.85083185038834,1.67759501242771,0.075726193333184,0,0.289864488701678,0,0.679971333707751,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0.216491041011214,1.26679932737549,0,0.5709193985953,0,0.445326417194474,0.693941307064543,0.913396434936424,0,0.753613202763113,0.587943535678524,0.125666591329675,0.741584903203122,0,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0.239630249011841,0,0.381210681219194,0.449371918214468,0,1.38219787324151,0.347648640384553,0.511430914660661,0,0.811206315338788,0.509196819251581,0.124406970610093,1.0108910337347,0,0.130120442962704,0.229902104433473,0.900310649026746,0.90422890701429,0.408218994907967,0.640568601424249,0.374806898238915,0.258703370739016,0.646703978798527,0.189106080167819,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,0.823128545631774,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.703578179943289,0.540186184383045,0,0.196764231747404,0.771335564436891,0.232533944750408,0.536546802799238,0,0.16455984991348,0,0.243206428637567,0.292399974850665,0,0.134206418760372,0.630869845692382,1.23485534855141,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.799739588268102,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0,0.318909537314974,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0.238968797952552,0,0,0,0,0,0.321321316421807,0.141940085208269,0.534196811001766,0.488660878060728,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,0,0,0,0.340439605753788,0.540183282093931,0.258717367565509,1.07168517515796,0.532020700926821,0.713475270408282,0.658196082408484,0.608929898229199,0,0.21183207086382,0.441056796109924,0,0.322928853391811,0.120625849856312,0,0,0,0.556275906031529,0,0.619160603889667,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0.316335993581135,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.495920734352016,0,0.129614973291793,0,38.8948127692091,0.448549638131936,0.330916980914195,0.583353565032143,0.774958940866387,1.01373675294467,0.352071715937262,0.2604087696879,0.734015410979976,11.8376219204743,26.2107305694658,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.292373642219257,0,0.116876902181569,0,0.443971906748129,0.269141569828427,0,0.19318959403219,0,0.183151624267265,0,0,1.12950368523413,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0,0,0,1.03552062350364,0.415149390336707,0,0.170733605754134,0.729320151204882,0.419226325255965,0,0.222246727801615,0,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.34461281373368,0,0.927074607558844,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0,0.290692833264657,0.376437521661322,0.592302255241736,0.73171189149109,0.263069711437843,0.407412341537585,0,0.355905054372522,0.492522411877817,0,0.929621047115796,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr19:47036426..47036462,- | |short_description=p@chr19:47036426..47036462,- | ||
}} | }} |
Latest revision as of 06:08, 4 August 2015
Short description: | p@chr19:47036426..47036462, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47036426..47036462, - |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.05e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-14 | 23 |
striatum neuron | 6.01e-12 | 3 |
neuron of the ventral spinal cord | 1.00e-11 | 3 |
neuron | 9.54e-10 | 33 |
neuronal stem cell | 9.54e-10 | 33 |
neuroblast | 9.54e-10 | 33 |
electrically signaling cell | 9.54e-10 | 33 |
electrically responsive cell | 5.42e-08 | 39 |
electrically active cell | 5.42e-08 | 39 |
neural cell | 4.27e-07 | 43 |
ectodermal cell | 6.74e-07 | 44 |
neurectodermal cell | 6.74e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.49e-13 | 34 |
regional part of spinal cord | 2.48e-12 | 5 |
gray matter of spinal cord | 2.48e-12 | 5 |
corpus striatum | 2.65e-12 | 5 |
striatum | 2.65e-12 | 5 |
ventral part of telencephalon | 2.65e-12 | 5 |
future corpus striatum | 2.65e-12 | 5 |
ventral horn of spinal cord | 1.00e-11 | 3 |
basal ganglion | 1.42e-11 | 8 |
nuclear complex of neuraxis | 1.42e-11 | 8 |
aggregate regional part of brain | 1.42e-11 | 8 |
collection of basal ganglia | 1.42e-11 | 8 |
cerebral subcortex | 1.42e-11 | 8 |
spinal cord | 2.68e-10 | 6 |
dorsal region element | 2.68e-10 | 6 |
dorsum | 2.68e-10 | 6 |
neural tube | 1.27e-09 | 52 |
neural rod | 1.27e-09 | 52 |
future spinal cord | 1.27e-09 | 52 |
neural keel | 1.27e-09 | 52 |
regional part of nervous system | 3.51e-09 | 54 |
central nervous system | 1.27e-08 | 73 |
nervous system | 2.55e-08 | 75 |
neurectoderm | 2.21e-07 | 64 |
neural plate | 2.21e-07 | 64 |
presumptive neural plate | 2.21e-07 | 64 |
brain grey matter | 5.29e-07 | 29 |
regional part of telencephalon | 5.29e-07 | 29 |
telencephalon | 5.29e-07 | 29 |