FFCP PHASE1:Mm9::chr3:88991843..88991887,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68521 | |EntrezGene=68521 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=40 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000125501_5end | |association_with_transcript=0bp_to_ENSMUST00000125501_5end | ||
|cluster_id=chr3:88991843..88991887,+ | |||
|description=CAGE_peak_3_at_Fam189b_5end | |description=CAGE_peak_3_at_Fam189b_5end | ||
|id=chr3:88991843..88991887,+ | |id=chr3:88991843..88991887,+ | ||
|ontology_enrichment_celltype=CL:0000838!4.17e-10!12;CL:0002031!1.64e-09!25;CL:0000084!1.69e-09!11;CL:0000827!1.69e-09!11;CL:0000542!4.59e-09!13;CL:0000051!4.59e-09!13;CL:0000988!3.96e-08!32;CL:0002032!3.96e-08!32;CL:0000037!3.96e-08!32;CL:0000566!3.96e-08!32;CL:0000837!3.96e-08!32;CL:0000791!1.58e-07!9;CL:0000789!1.58e-07!9;CL:0002420!1.58e-07!9;CL:0002419!1.58e-07!9;CL:0000790!1.58e-07!9;CL:0000553!8.12e-07!6;CL:0000556!8.12e-07!6 | |ontology_enrichment_celltype=CL:0000838!4.17e-10!12;CL:0002031!1.64e-09!25;CL:0000084!1.69e-09!11;CL:0000827!1.69e-09!11;CL:0000542!4.59e-09!13;CL:0000051!4.59e-09!13;CL:0000988!3.96e-08!32;CL:0002032!3.96e-08!32;CL:0000037!3.96e-08!32;CL:0000566!3.96e-08!32;CL:0000837!3.96e-08!32;CL:0000791!1.58e-07!9;CL:0000789!1.58e-07!9;CL:0002420!1.58e-07!9;CL:0002419!1.58e-07!9;CL:0000790!1.58e-07!9;CL:0000553!8.12e-07!6;CL:0000556!8.12e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,8.07e-14,11;CL:0000827,8.07e-14,11;CL:0000838,1.39e-12,12;CL:0000542,1.55e-11,13;CL:0000051,1.55e-11,13;CL:0002031,2.97e-11,25;CL:0000791,2.84e-09,9;CL:0000789,2.84e-09,9;CL:0002420,2.84e-09,9;CL:0002419,2.84e-09,9;CL:0000790,2.84e-09,9;CL:0000738,1.41e-08,17;CL:0002087,1.41e-08,17;CL:0000988,2.26e-08,32;CL:0002032,2.26e-08,32;CL:0000037,2.26e-08,32;CL:0000837,2.26e-08,32;CL:0000624,5.88e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.19e-18!48;UBERON:0004177!2.14e-17!29;UBERON:0002390!2.07e-15!45;UBERON:0003061!2.07e-15!45;UBERON:0003408!5.24e-15!24;UBERON:0002370!4.21e-14!23;UBERON:0000974!4.21e-14!23;UBERON:0004807!4.21e-14!23;UBERON:0005058!4.21e-14!23;UBERON:0003351!4.21e-14!23;UBERON:0009113!4.21e-14!23;UBERON:0003295!4.21e-14!23;UBERON:0009722!4.21e-14!23;UBERON:0005562!4.21e-14!23;UBERON:0007690!4.21e-14!23;UBERON:0006562!3.08e-13!24;UBERON:0001557!3.08e-13!24;UBERON:0001042!3.08e-13!24;UBERON:0008814!3.08e-13!24;UBERON:0009145!3.08e-13!24;UBERON:0002405!3.89e-12!70;UBERON:0001007!4.22e-11!128;UBERON:0001555!4.22e-11!128;UBERON:0007026!4.22e-11!128;UBERON:0000072!4.79e-11!27;UBERON:0004119!1.11e-10!130;UBERON:0000925!1.11e-10!130;UBERON:0006595!1.11e-10!130;UBERON:0004921!5.34e-10!126;UBERON:0004185!5.34e-10!126;UBERON:0001004!6.58e-10!42;UBERON:0005057!1.13e-09!51;UBERON:0000065!3.25e-09!41;UBERON:0000063!2.93e-08!35 | |ontology_enrichment_uberon=UBERON:0002193!5.19e-18!48;UBERON:0004177!2.14e-17!29;UBERON:0002390!2.07e-15!45;UBERON:0003061!2.07e-15!45;UBERON:0003408!5.24e-15!24;UBERON:0002370!4.21e-14!23;UBERON:0000974!4.21e-14!23;UBERON:0004807!4.21e-14!23;UBERON:0005058!4.21e-14!23;UBERON:0003351!4.21e-14!23;UBERON:0009113!4.21e-14!23;UBERON:0003295!4.21e-14!23;UBERON:0009722!4.21e-14!23;UBERON:0005562!4.21e-14!23;UBERON:0007690!4.21e-14!23;UBERON:0006562!3.08e-13!24;UBERON:0001557!3.08e-13!24;UBERON:0001042!3.08e-13!24;UBERON:0008814!3.08e-13!24;UBERON:0009145!3.08e-13!24;UBERON:0002405!3.89e-12!70;UBERON:0001007!4.22e-11!128;UBERON:0001555!4.22e-11!128;UBERON:0007026!4.22e-11!128;UBERON:0000072!4.79e-11!27;UBERON:0004119!1.11e-10!130;UBERON:0000925!1.11e-10!130;UBERON:0006595!1.11e-10!130;UBERON:0004921!5.34e-10!126;UBERON:0004185!5.34e-10!126;UBERON:0001004!6.58e-10!42;UBERON:0005057!1.13e-09!51;UBERON:0000065!3.25e-09!41;UBERON:0000063!2.93e-08!35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,1.56e-21,24;UBERON:0002193,4.51e-21,48;UBERON:0002405,4.51e-21,48;UBERON:0002370,1.78e-19,23;UBERON:0000974,1.78e-19,23;UBERON:0004807,1.78e-19,23;UBERON:0005058,1.78e-19,23;UBERON:0003351,1.78e-19,23;UBERON:0009113,1.78e-19,23;UBERON:0003295,1.78e-19,23;UBERON:0009722,1.78e-19,23;UBERON:0005562,1.78e-19,23;UBERON:0007690,1.78e-19,23;UBERON:0006562,1.48e-18,24;UBERON:0001557,1.48e-18,24;UBERON:0001042,1.48e-18,24;UBERON:0008814,1.48e-18,24;UBERON:0009145,1.48e-18,24;UBERON:0004177,1.62e-17,29;UBERON:0005057,1.62e-17,29;UBERON:0000072,3.35e-16,27;UBERON:0002390,4.78e-16,45;UBERON:0003061,4.78e-16,45;UBERON:0000077,5.09e-14,35;UBERON:0007811,2.12e-13,36;UBERON:0001004,7.12e-13,42;UBERON:0000065,1.79e-11,41;UBERON:0000153,9.35e-11,43;UBERON:0002465,4.04e-09,3;UBERON:0003081,1.44e-07,87 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,12.5249623738329,0.422366166455,0.234064526321993,0.171217968225505,0,12.6688540149092,13.2879011676876,0.333109761815663,0.404950534779652,0.699561878128147,5.20512572841092,3.97631857456642,2.12194825899015,0.0850432901510698,3.27660138962921,1.30599894569468,1.11994695955385,1.14704640533585,0,0,0.215471232685889,0,0.756090389279792,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,4.35217285206807,11.0910953717013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,3.6251303710604,0.29688427812965,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0,0,0,0,0,2.29911349687732,0,0.599902730993408,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,1.84753190166605,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,0,2.39219233116994,0,0.555583582109135,0.565105371014073,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,2.02725215290164,2.2596410576262,1.16928740680016,1.9692936523423,0.39736270956253,1.80293174279953,0.590758108698309,0.807731599585181,1.295515713135,1.41156659191577,1.16949456887703,2.21287235772758,2.10378423926824,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,12.5249623738329,0.422366166455,0.234064526321993,0.171217968225505,0,12.6688540149092,13.2879011676876,0.333109761815663,0.404950534779652,0.699561878128147,5.20512572841092,3.97631857456642,2.12194825899015,0.0850432901510698,3.27660138962921,1.30599894569468,1.11994695955385,1.14704640533585,0,0,0.215471232685889,0,0.756090389279792,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,4.35217285206807,11.0910953717013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,3.6251303710604,0.29688427812965,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0,0,0,0,0,2.29911349687732,0,0.599902730993408,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,1.84753190166605,0,0,0,0,0,0,0,0,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0.291480836629851,0,2.39219233116994,0,0.555583582109135,0.565105371014073,0.410082683163076,0.915112692826091,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,2.02725215290164,2.2596410576262,1.16928740680016,1.9692936523423,0.39736270956253,1.80293174279953,0.590758108698309,0.807731599585181,1.295515713135,1.41156659191577,1.16949456887703,2.21287235772758,2.10378423926824,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Fam189b | |short_description=p3@Fam189b | ||
}} | }} |
Latest revision as of 20:21, 25 September 2015
Short description: | p3@Fam189b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam189b_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | 0bp_to_ENSMUST00000125501_5end |
EntrezGene: | Fam189b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 8.07e-14 | 11 |
pro-T cell | 8.07e-14 | 11 |
lymphoid lineage restricted progenitor cell | 1.39e-12 | 12 |
lymphocyte | 1.55e-11 | 13 |
common lymphoid progenitor | 1.55e-11 | 13 |
hematopoietic lineage restricted progenitor cell | 2.97e-11 | 25 |
mature alpha-beta T cell | 2.84e-09 | 9 |
alpha-beta T cell | 2.84e-09 | 9 |
immature T cell | 2.84e-09 | 9 |
mature T cell | 2.84e-09 | 9 |
immature alpha-beta T cell | 2.84e-09 | 9 |
leukocyte | 1.41e-08 | 17 |
nongranular leukocyte | 1.41e-08 | 17 |
hematopoietic cell | 2.26e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.26e-08 | 32 |
hematopoietic stem cell | 2.26e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.26e-08 | 32 |
CD4-positive, alpha-beta T cell | 5.88e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 1.56e-21 | 24 |
hemolymphoid system | 4.51e-21 | 48 |
immune system | 4.51e-21 | 48 |
thymus | 1.78e-19 | 23 |
neck | 1.78e-19 | 23 |
respiratory system epithelium | 1.78e-19 | 23 |
hemolymphoid system gland | 1.78e-19 | 23 |
pharyngeal epithelium | 1.78e-19 | 23 |
thymic region | 1.78e-19 | 23 |
pharyngeal gland | 1.78e-19 | 23 |
entire pharyngeal arch endoderm | 1.78e-19 | 23 |
thymus primordium | 1.78e-19 | 23 |
early pharyngeal endoderm | 1.78e-19 | 23 |
pharynx | 1.48e-18 | 24 |
upper respiratory tract | 1.48e-18 | 24 |
chordate pharynx | 1.48e-18 | 24 |
pharyngeal arch system | 1.48e-18 | 24 |
pharyngeal region of foregut | 1.48e-18 | 24 |
hemopoietic organ | 1.62e-17 | 29 |
immune organ | 1.62e-17 | 29 |
segment of respiratory tract | 3.35e-16 | 27 |
hematopoietic system | 4.78e-16 | 45 |
blood island | 4.78e-16 | 45 |
mixed endoderm/mesoderm-derived structure | 5.09e-14 | 35 |
craniocervical region | 2.12e-13 | 36 |
respiratory system | 7.12e-13 | 42 |
respiratory tract | 1.79e-11 | 41 |
anterior region of body | 9.35e-11 | 43 |
lymphoid system | 4.04e-09 | 3 |
lateral plate mesoderm | 1.44e-07 | 87 |