FFCP PHASE1:Mm9::chr4:83132361..83132382,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=101739 | |EntrezGene=101739 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=Q99JF8 | |UniProt=Q99JF8 | ||
|association_with_transcript=0bp_to_ENSMUST00000030207,ENSMUST00000107215_5end | |association_with_transcript=0bp_to_ENSMUST00000030207,ENSMUST00000107215_5end | ||
|cluster_id=chr4:83132361..83132382,- | |||
|description=CAGE_peak_2_at_Psip1_5end | |description=CAGE_peak_2_at_Psip1_5end | ||
|id=chr4:83132361..83132382,- | |id=chr4:83132361..83132382,- | ||
|ontology_enrichment_celltype=CL:0000540!4.27e-15!33;CL:0000047!4.27e-15!33;CL:0000031!4.27e-15!33;CL:0000404!4.27e-15!33;CL:0000393!2.75e-14!39;CL:0000211!2.75e-14!39;CL:0000117!3.20e-10!23;CL:0000337!3.20e-10!23;CL:0002319!3.96e-08!43;CL:0000221!4.44e-08!44;CL:0000133!4.44e-08!44;CL:0000055!1.30e-07!50 | |ontology_enrichment_celltype=CL:0000540!4.27e-15!33;CL:0000047!4.27e-15!33;CL:0000031!4.27e-15!33;CL:0000404!4.27e-15!33;CL:0000393!2.75e-14!39;CL:0000211!2.75e-14!39;CL:0000117!3.20e-10!23;CL:0000337!3.20e-10!23;CL:0002319!3.96e-08!43;CL:0000221!4.44e-08!44;CL:0000133!4.44e-08!44;CL:0000055!1.30e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.27e-15,33;CL:0000047,4.27e-15,33;CL:0000031,4.27e-15,33;CL:0000404,4.27e-15,33;CL:0000393,2.75e-14,39;CL:0000211,2.75e-14,39;CL:0000117,3.20e-10,23;CL:0000337,3.20e-10,23;CL:0002319,3.96e-08,43;CL:0000221,4.44e-08,44;CL:0000133,4.44e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.96e-15!75;UBERON:0001016!8.96e-15!75;UBERON:0001017!1.55e-14!73;UBERON:0005743!1.55e-14!73;UBERON:0004121!2.45e-12!102;UBERON:0000924!2.45e-12!102;UBERON:0006601!2.45e-12!102;UBERON:0000153!1.94e-11!94;UBERON:0002346!4.85e-11!71;UBERON:0003075!4.85e-11!71;UBERON:0007284!4.85e-11!71;UBERON:0002020!7.60e-11!34;UBERON:0007811!2.33e-10!86;UBERON:0001049!9.51e-10!52;UBERON:0005068!9.51e-10!52;UBERON:0006241!9.51e-10!52;UBERON:0007135!9.51e-10!52;UBERON:0000033!3.06e-09!63;UBERON:0000955!3.57e-09!50;UBERON:0006238!3.57e-09!50;UBERON:0003056!4.17e-09!49;UBERON:0002616!1.17e-08!49;UBERON:0002791!2.83e-08!29;UBERON:0003528!2.83e-08!29;UBERON:0001893!2.83e-08!29;UBERON:0003080!4.59e-08!40;UBERON:0002780!1.17e-07!39;UBERON:0001890!1.17e-07!39;UBERON:0006240!1.17e-07!39 | |ontology_enrichment_uberon=UBERON:0000073!8.96e-15!75;UBERON:0001016!8.96e-15!75;UBERON:0001017!1.55e-14!73;UBERON:0005743!1.55e-14!73;UBERON:0004121!2.45e-12!102;UBERON:0000924!2.45e-12!102;UBERON:0006601!2.45e-12!102;UBERON:0000153!1.94e-11!94;UBERON:0002346!4.85e-11!71;UBERON:0003075!4.85e-11!71;UBERON:0007284!4.85e-11!71;UBERON:0002020!7.60e-11!34;UBERON:0007811!2.33e-10!86;UBERON:0001049!9.51e-10!52;UBERON:0005068!9.51e-10!52;UBERON:0006241!9.51e-10!52;UBERON:0007135!9.51e-10!52;UBERON:0000033!3.06e-09!63;UBERON:0000955!3.57e-09!50;UBERON:0006238!3.57e-09!50;UBERON:0003056!4.17e-09!49;UBERON:0002616!1.17e-08!49;UBERON:0002791!2.83e-08!29;UBERON:0003528!2.83e-08!29;UBERON:0001893!2.83e-08!29;UBERON:0003080!4.59e-08!40;UBERON:0002780!1.17e-07!39;UBERON:0001890!1.17e-07!39;UBERON:0006240!1.17e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.96e-15,75;UBERON:0001017,1.55e-14,73;UBERON:0004121,2.27e-13,95;UBERON:0000924,2.27e-13,95;UBERON:0006601,2.27e-13,95;UBERON:0002346,2.04e-12,64;UBERON:0003075,2.04e-12,64;UBERON:0007284,2.04e-12,64;UBERON:0000073,5.05e-11,54;UBERON:0010371,5.56e-11,73;UBERON:0002020,7.60e-11,34;UBERON:0001049,9.51e-10,52;UBERON:0005068,9.51e-10,52;UBERON:0006241,9.51e-10,52;UBERON:0007135,9.51e-10,52;UBERON:0003056,4.17e-09,49;UBERON:0003528,2.83e-08,29;UBERON:0002791,2.83e-08,29;UBERON:0001893,2.83e-08,29;UBERON:0003080,4.59e-08,40;UBERON:0000955,1.16e-07,47;UBERON:0006238,1.16e-07,47;UBERON:0002780,1.17e-07,39;UBERON:0001890,1.17e-07,39;UBERON:0006240,1.17e-07,39;UBERON:0010314,2.93e-07,92;UBERON:0002616,3.53e-07,46 | |||
|phase1_expression=15.6945870162698,1.39590163055744,1.81999695755814,0.90739263392049,1.50268718983904,5.54001597309236,7.94282978024787,25.1790480711074,6.75785866328,9.12851652655775,7.53359060192222,15.5555710040906,16.0928686135333,30.0726184321351,21.3190247562024,14.1732687172878,15.3903613188192,10.4102514568218,10.2835825204304,6.79023442876848,19.9851731855014,14.8936426801328,15.9331871374751,5.27974995218242,4.5881856213434,1.14846392823004,3.01533397311352,3.878482188346,3.80046838912748,3.52842181663903,3.32595765982957,6.98533740805594,3.07532393792285,0,7.51014211353314,5.98444723290572,4.28755648150975,5.02237956884289,6.2506827561904,7.32933241563318,6.47054636834116,4.09827290975067,5.82612423637384,24.9275699591643,22.6070556619517,14.8672869250962,7.04152209913235,4.79655344036982,2.63623419281366,6.22175677037707,6.15940255151595,4.31257693094915,10.2347389695219,24.6623128283857,26.2153163331122,11.3194151855817,16.6189395164479,15.9858348606007,25.4918740683093,21.6886301501533,21.5502677192101,5.42151251310611,3.55717918444456,3.1496490104849,1.97773272513395,1.4209602298922,4.79360176829448,6.53171119046643,26.0260926894279,18.9008313664367,22.0841209418951,22.5664277679005,30.2589901103711,26.70299422886,19.6483215587385,22.9804696652505,38.540558349786,37.2847027208748,32.8717981168361,24.6627358055462,24.793151416253,26.5665818983948,21.7762739221077,25.3243174514256,34.8380004931127,60.3988600221019,45.701309536512,35.6022941526324,16.3568577599678,22.6714680320357,5.2175607966302,6.88339101585109,10.1995700056163,10.7940638327563,3.24888208723835,5.37632264516803,15.5893306346245,18.7473354835864,11.1707981979234,16.606960001986,16.4786801138716,21.815501160434,35.6727335589304,14.2213340630666,8.22665955842614,9.62767488805375,10.1104889002957,13.1311461676919,22.7865337609511,14.6957717674177,19.2568712710411,10.9607572192371,14.7593918243877,12.5099791658677,13.8754674420132,13.3206586809456,7.41584903203122,7.80836527367523,18.5768215909474,17.3090529443728,14.3546986999256,10.1823803158397,1.86391761218122,21.6657789788545,16.7557365450764,3.32094171771169,12.7004031976275,7.7987355029143,9.14905634926066,26.3631525352488,31.5675415944852,33.6753663662477,23.9877561865342,20.9686675010871,22.648896856992,18.4955039897244,23.7285717771237,9.20611582514688,13.3943061969848,9.6803253707778,23.291559290324,20.0014830857121,28.2697543794398,25.0169997607287,23.5406287063594,19.9857403644366,21.4576949241779,12.9351685369508,24.1436152084783,30.8242910673545,25.6888641279365,17.9740500590611,14.4584569597311,14.626590993931,14.610531684964,20.1024609486678,14.7464769335779,12.610047448621,8.24074148247219,18.6413195281952,20.8728193383176,17.2859579002574,16.0986420197943,17.7087808572663,18.2035193207106,14.6496385192757,8.04820204198858,12.2603609485528,11.8483091937706,7.88003827579657,5.43161023957233,4.38599962275997,5.04965265169416,4.56301823785264,24.3936340334388,32.4149528994746,3.96502539580558,4.49565963328025,26.8743195674395,23.6881405297647,20.747661272857,15.9329984452441,9.78463392917429,7.03834816616469,5.69434873853414,5.59976446061637,7.54005626400809,8.95304124185179,7.60359939764569,5.39291645192533,4.97117514711797,4.77939055810481,10.4317345524195,22.9639510345555,22.5415471346161,15.6811522440892,14.5464365375719,14.097299797954,9.42224403151434,5.75679577120448,4.86696056308262,5.92306386824642,7.11486305009157,21.1893284259439,23.3905204184712,15.9652099793246,20.8945925030158,15.9176925436595,11.2035374783825,10.0693648107784,12.9708181420028,10.7078951143352,20.1275489138296,8.18710084870708,10.2972432127805,9.59799736199025,9.14926808961752,4.82443521363367,9.60716588866344,22.9284608242287,32.1041003590791,20.708900464573,12.6732734075791,14.4055381399962,10.2358765580986,9.36641509717434,14.029527825451,15.2810635857655,10.2051051940792,6.39066927391378,7.59813920209941,6.65385669474953,0,3.80733978673097,9.34352118736169,7.72622889653251,18.7844190285717,18.7538698547525,35.4099482013619,6.31177318010932,30.9198055027932,28.8924670779512,37.483671205507,34.4115069051675,30.523418349288,37.3661020641259,32.3848561339915,26.3030272120181,27.2748566783101,35.6666661228206,14.9037089468682,14.2452482933804,28.5052178868758,14.6823409445557,2.65490276679926,15.5379607139188,13.6045600634138,9.8074641473067,8.26845300066164,13.2197113615889,10.5955600198971,10.1789444253702,13.1904030002347,6.95280867458795,5.27093042874994,6.18813259489121,22.1285743739962,20.1668425315067,9.83125996748934,16.7182887324642,26.0690143454142,14.2695054081656,15.1385098953951,7.61162372786498,16.192347856396,14.4045808187398,18.0833286405069,16.9832840529724,14.6932628293274,19.9032652262914,14.8021706563889,14.9368218768006,6.41257840585672,24.6615651673978,14.5240248678175,15.4790150972417,17.5934801001226,18.0833718724503,17.6335553760122,18.0734756833153,14.4481665494777,17.2140286358099,16.8603968041397,2.86401185404534,29.261079406255,22.7717803182071,16.416811804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| ||
|short_description=p2@Psip1 | |short_description=p2@Psip1 | ||
}} | }} |
Latest revision as of 06:04, 27 September 2015
Short description: | p2@Psip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Psip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 0bp_to_ENSMUST00000030207, ENSMUST00000107215_5end |
EntrezGene: | Psip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.27e-15 | 33 |
neuronal stem cell | 4.27e-15 | 33 |
neuroblast | 4.27e-15 | 33 |
electrically signaling cell | 4.27e-15 | 33 |
electrically responsive cell | 2.75e-14 | 39 |
electrically active cell | 2.75e-14 | 39 |
CNS neuron (sensu Vertebrata) | 3.20e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.20e-10 | 23 |
neural cell | 3.96e-08 | 43 |
ectodermal cell | 4.44e-08 | 44 |
neurectodermal cell | 4.44e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.96e-15 | 75 |
central nervous system | 1.55e-14 | 73 |
ectoderm-derived structure | 2.27e-13 | 95 |
ectoderm | 2.27e-13 | 95 |
presumptive ectoderm | 2.27e-13 | 95 |
neurectoderm | 2.04e-12 | 64 |
neural plate | 2.04e-12 | 64 |
presumptive neural plate | 2.04e-12 | 64 |
regional part of nervous system | 5.05e-11 | 54 |
ecto-epithelium | 5.56e-11 | 73 |
gray matter | 7.60e-11 | 34 |
neural tube | 9.51e-10 | 52 |
neural rod | 9.51e-10 | 52 |
future spinal cord | 9.51e-10 | 52 |
neural keel | 9.51e-10 | 52 |
pre-chordal neural plate | 4.17e-09 | 49 |
brain grey matter | 2.83e-08 | 29 |
regional part of telencephalon | 2.83e-08 | 29 |
telencephalon | 2.83e-08 | 29 |
anterior neural tube | 4.59e-08 | 40 |
brain | 1.16e-07 | 47 |
future brain | 1.16e-07 | 47 |
regional part of forebrain | 1.17e-07 | 39 |
forebrain | 1.17e-07 | 39 |
future forebrain | 1.17e-07 | 39 |
structure with developmental contribution from neural crest | 2.93e-07 | 92 |
regional part of brain | 3.53e-07 | 46 |