FFCP PHASE1:Mm9::chr5:31247879..31247960,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68567 | |EntrezGene=68567 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9QPK1,Q8R1U2 | |UniProt=E9QPK1,Q8R1U2 | ||
|association_with_transcript=-26bp_to_ENSMUST00000031051,NM_026770,uc008wwo.1_5end | |association_with_transcript=-26bp_to_ENSMUST00000031051,NM_026770,uc008wwo.1_5end | ||
|cluster_id=chr5:31247879..31247960,- | |||
|description=CAGE_peak_2_at_Cgref1_5end | |description=CAGE_peak_2_at_Cgref1_5end | ||
|id=chr5:31247879..31247960,- | |id=chr5:31247879..31247960,- | ||
|ontology_enrichment_celltype=CL:0002319!1.26e-09!43;CL:0000221!1.39e-09!44;CL:0000133!1.39e-09!44;CL:0000117!2.22e-09!23;CL:0000337!2.22e-09!23;CL:0000540!7.84e-09!33;CL:0000047!7.84e-09!33;CL:0000031!7.84e-09!33;CL:0000404!7.84e-09!33;CL:0000055!2.27e-07!50;CL:0002321!4.95e-07!70;CL:0000220!4.95e-07!70;CL:0000393!5.00e-07!39;CL:0000211!5.00e-07!39 | |ontology_enrichment_celltype=CL:0002319!1.26e-09!43;CL:0000221!1.39e-09!44;CL:0000133!1.39e-09!44;CL:0000117!2.22e-09!23;CL:0000337!2.22e-09!23;CL:0000540!7.84e-09!33;CL:0000047!7.84e-09!33;CL:0000031!7.84e-09!33;CL:0000404!7.84e-09!33;CL:0000055!2.27e-07!50;CL:0002321!4.95e-07!70;CL:0000220!4.95e-07!70;CL:0000393!5.00e-07!39;CL:0000211!5.00e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.12e-09,43;CL:0000221,1.24e-09,44;CL:0000133,1.24e-09,44;CL:0000117,2.38e-09,23;CL:0000337,2.38e-09,23;CL:0000540,7.75e-09,33;CL:0000047,7.75e-09,33;CL:0000031,7.75e-09,33;CL:0000404,7.75e-09,33;CL:0002321,2.08e-07,70;CL:0000393,8.05e-07,39;CL:0000211,8.05e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.08e-15!75;UBERON:0001016!2.08e-15!75;UBERON:0001017!3.49e-14!73;UBERON:0005743!3.49e-14!73;UBERON:0004121!7.28e-13!102;UBERON:0000924!7.28e-13!102;UBERON:0006601!7.28e-13!102;UBERON:0001049!2.31e-10!52;UBERON:0005068!2.31e-10!52;UBERON:0006241!2.31e-10!52;UBERON:0007135!2.31e-10!52;UBERON:0002020!2.90e-09!34;UBERON:0002616!6.83e-09!49;UBERON:0000955!7.45e-09!50;UBERON:0006238!7.45e-09!50;UBERON:0002346!1.04e-08!71;UBERON:0003075!1.04e-08!71;UBERON:0007284!1.04e-08!71;UBERON:0000033!1.36e-08!63;UBERON:0003080!1.22e-07!40;UBERON:0003056!2.68e-07!49;UBERON:0002780!3.22e-07!39;UBERON:0001890!3.22e-07!39;UBERON:0006240!3.22e-07!39;UBERON:0000160!4.38e-07!43 | |ontology_enrichment_uberon=UBERON:0000073!2.08e-15!75;UBERON:0001016!2.08e-15!75;UBERON:0001017!3.49e-14!73;UBERON:0005743!3.49e-14!73;UBERON:0004121!7.28e-13!102;UBERON:0000924!7.28e-13!102;UBERON:0006601!7.28e-13!102;UBERON:0001049!2.31e-10!52;UBERON:0005068!2.31e-10!52;UBERON:0006241!2.31e-10!52;UBERON:0007135!2.31e-10!52;UBERON:0002020!2.90e-09!34;UBERON:0002616!6.83e-09!49;UBERON:0000955!7.45e-09!50;UBERON:0006238!7.45e-09!50;UBERON:0002346!1.04e-08!71;UBERON:0003075!1.04e-08!71;UBERON:0007284!1.04e-08!71;UBERON:0000033!1.36e-08!63;UBERON:0003080!1.22e-07!40;UBERON:0003056!2.68e-07!49;UBERON:0002780!3.22e-07!39;UBERON:0001890!3.22e-07!39;UBERON:0006240!3.22e-07!39;UBERON:0000160!4.38e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-15,75;UBERON:0001017,2.15e-14,73;UBERON:0004121,5.70e-14,95;UBERON:0000924,5.70e-14,95;UBERON:0006601,5.70e-14,95;UBERON:0000073,9.07e-12,54;UBERON:0001049,1.90e-10,52;UBERON:0005068,1.90e-10,52;UBERON:0006241,1.90e-10,52;UBERON:0007135,1.90e-10,52;UBERON:0002346,6.80e-10,64;UBERON:0003075,6.80e-10,64;UBERON:0007284,6.80e-10,64;UBERON:0002020,2.79e-09,34;UBERON:0010371,1.18e-08,73;UBERON:0000160,1.86e-08,31;UBERON:0003080,1.21e-07,40;UBERON:0002616,1.58e-07,46;UBERON:0000955,1.68e-07,47;UBERON:0006238,1.68e-07,47;UBERON:0003056,2.68e-07,49;UBERON:0002780,3.27e-07,39;UBERON:0001890,3.27e-07,39;UBERON:0006240,3.27e-07,39 | |||
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| ||
|short_description=p2@Cgref1 | |short_description=p2@Cgref1 | ||
}} | }} |
Latest revision as of 22:07, 25 September 2015
Short description: | p2@Cgref1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cgref1_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENSMUST00000031051, NM_026770, uc008wwo.1_5end |
EntrezGene: | Cgref1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.12e-09 | 43 |
ectodermal cell | 1.24e-09 | 44 |
neurectodermal cell | 1.24e-09 | 44 |
CNS neuron (sensu Vertebrata) | 2.38e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-09 | 23 |
neuron | 7.75e-09 | 33 |
neuronal stem cell | 7.75e-09 | 33 |
neuroblast | 7.75e-09 | 33 |
electrically signaling cell | 7.75e-09 | 33 |
embryonic cell | 2.08e-07 | 70 |
electrically responsive cell | 8.05e-07 | 39 |
electrically active cell | 8.05e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.19e-15 | 75 |
central nervous system | 2.15e-14 | 73 |
ectoderm-derived structure | 5.70e-14 | 95 |
ectoderm | 5.70e-14 | 95 |
presumptive ectoderm | 5.70e-14 | 95 |
regional part of nervous system | 9.07e-12 | 54 |
neural tube | 1.90e-10 | 52 |
neural rod | 1.90e-10 | 52 |
future spinal cord | 1.90e-10 | 52 |
neural keel | 1.90e-10 | 52 |
neurectoderm | 6.80e-10 | 64 |
neural plate | 6.80e-10 | 64 |
presumptive neural plate | 6.80e-10 | 64 |
gray matter | 2.79e-09 | 34 |
ecto-epithelium | 1.18e-08 | 73 |
intestine | 1.86e-08 | 31 |
anterior neural tube | 1.21e-07 | 40 |
regional part of brain | 1.58e-07 | 46 |
brain | 1.68e-07 | 47 |
future brain | 1.68e-07 | 47 |
pre-chordal neural plate | 2.68e-07 | 49 |
regional part of forebrain | 3.27e-07 | 39 |
forebrain | 3.27e-07 | 39 |
future forebrain | 3.27e-07 | 39 |