FFCP PHASE1:Hg19::chr10:44873807..44873824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:44873807..44873824,- | |||
|description=CAGE_peak_at_chr10:44873807..44873824,- | |description=CAGE_peak_at_chr10:44873807..44873824,- | ||
|id=chr10:44873807..44873824,- | |id=chr10:44873807..44873824,- | ||
|ontology_enrichment_celltype=CL:0000057!2.32e-07!75;CL:0002620!3.88e-07!23 | |ontology_enrichment_celltype=CL:0000057!2.32e-07!75;CL:0002620!3.88e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000214;1.25e-12;3!CL:0000135;5.26e-12;3!CL:0002564;5.26e-12;3!CL:0000388;5.26e-12;3!CL:0002591;4.65e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.15e-12,3;CL:0000135,2.69e-12,3;CL:0000388,2.69e-12,3;CL:0002564,1.14e-11,3;CL:0002591,5.31e-10,1;CL:0000057,2.08e-09,76 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.25e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.25e-09;1!DOID:17;1.50e-07;5!DOID:450;1.50e-07;5!DOID:66;1.50e-07;5!DOID:423;1.50e-07;5!DOID:0080000;1.50e-07;5!DOID:11722;1.50e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.48e-09,1;DOID:17,1.96e-07,5;DOID:450,1.96e-07,5;DOID:66,1.96e-07,5;DOID:423,1.96e-07,5;DOID:0080000,1.96e-07,5;DOID:11722,1.96e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!2.45e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.12e-17;8!UBERON:0000982;3.12e-17;8!UBERON:0004770;3.12e-17;8!UBERON:0006915;1.25e-12;3!UBERON:0007616;1.25e-12;3!UBERON:0002217;1.25e-12;3!UBERON:0002018;1.25e-12;3!UBERON:0007846;5.26e-12;3!UBERON:0000043;5.26e-12;3!UBERON:0007845;5.26e-12;3!UBERON:0002242;5.26e-12;3!UBERON:0000941;1.25e-09;1!UBERON:0001785;1.25e-09;1!UBERON:0002464;1.25e-09;1!UBERON:0004904;1.25e-09;1!UBERON:0001021;1.25e-09;1!UBERON:0011135;1.50e-07;5!UBERON:0002216;1.50e-07;5!UBERON:0011134;1.50e-07;5!UBERON:0002209;1.50e-07;5!UBERON:0002213;1.50e-07;5!UBERON:0007844;1.50e-07;5!UBERON:0011138;1.50e-07;5!UBERON:0001130;1.50e-07;5!UBERON:0001066;1.50e-07;5!UBERON:0001468;1.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,5.27e-17,8;UBERON:0000982,5.27e-17,8;UBERON:0004770,5.27e-17,8;UBERON:0006915,1.15e-12,3;UBERON:0007616,1.15e-12,3;UBERON:0002217,1.15e-12,3;UBERON:0002018,1.15e-12,3;UBERON:0007846,2.69e-12,3;UBERON:0000043,2.69e-12,3;UBERON:0007845,2.69e-12,3;UBERON:0002242,1.14e-11,3;UBERON:0003068,1.14e-11,3;UBERON:0002328,1.14e-11,3;UBERON:0004880,1.14e-11,3;UBERON:0000941,1.06e-09,1;UBERON:0001785,1.06e-09,1;UBERON:0002464,1.06e-09,1;UBERON:0004904,1.06e-09,1;UBERON:0001021,1.06e-09,1;UBERON:0003902,1.06e-09,1;UBERON:0005425,1.06e-09,1;UBERON:0011135,2.38e-07,5;UBERON:0002216,2.38e-07,5;UBERON:0011134,2.38e-07,5;UBERON:0002209,2.38e-07,5;UBERON:0002213,2.38e-07,5;UBERON:0005856,2.38e-07,5;UBERON:0005866,2.38e-07,5;UBERON:0005863,2.38e-07,5;UBERON:0007844,2.38e-07,5;UBERON:0011138,2.38e-07,5;UBERON:0001130,2.38e-07,5;UBERON:0001066,2.38e-07,5;UBERON:0001468,2.38e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,1.30592814099919,0,0,0,0,0.123766352960047,0.331397375727916,0,1.20538905604795,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0,1.06400514659507,0,0,2.4666754841716,1.55605517699883,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.901428353439581,0,0,1.06778694409284,1.27159140695737,0.300091096084402,0.618315175430633,0,1.11670113798954,1.68776332241266,0.389748020644795,0,0.828449087780694,0.646584227275248,0.710019185033229,0.201504196455281,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.10422342547226,1.00034104211935,0,0.831883446123229,0.892144943985809,0.157702415033935,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710246901252508,0.164254312027618,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,5.9110137883346,2.96365403663912,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0.714695326373367,0.662091970365432,0,1.08599920350743,0,0.326587360109409,0,0,1.36310417428337,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,1.76097531226803,0.889811221596536,0,0.302461847526478,0.310874401165561,0.295710299979268,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.867550349813015,0,0.636008701306837,0,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.514464028312255,0,0.131545547125698,0,0,0.470958557103084,0,0,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,1.48798007266701,1.84870251452567,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0,0.0645889098360061,0,0,0.12729431655633,0.202117188958219,0.653150243690884,0,0.26940821205835,0.0717222053926763,1.66330178273007,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,1.30592814099919,0,0,0,0,0.123766352960047,0.331397375727916,0,1.20538905604795,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0,1.06400514659507,0,0,2.4666754841716,1.55605517699883,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0.901428353439581,0,0,1.06778694409284,1.27159140695737,0.300091096084402,0.618315175430633,0,1.11670113798954,1.68776332241266,0.389748020644795,0,0.828449087780694,0.646584227275248,0.710019185033229,0.201504196455281,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,1.10422342547226,1.00034104211935,0,0.831883446123229,0.892144943985809,0.157702415033935,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710246901252508,0.164254312027618,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762520775695299,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,5.9110137883346,2.96365403663912,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.398495976502139,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.209818352539992,0,0,0,0.714695326373367,0.662091970365432,0,1.08599920350743,0,0.326587360109409,0,0,1.36310417428337,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,1.76097531226803,0.889811221596536,0,0.302461847526478,0.310874401165561,0.295710299979268,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.867550349813015,0,0.636008701306837,0,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.514464028312255,0,0.131545547125698,0,0,0.470958557103084,0,0,1.82631744101899,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0.5290268405154,1.48798007266701,1.84870251452567,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0,0.0645889098360061,0,0,0.12729431655633,0.202117188958219,0.653150243690884,0,0.26940821205835,0.0717222053926763,1.66330178273007,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr10:44873807..44873824,- | |short_description=p@chr10:44873807..44873824,- | ||
}} | }} |
Latest revision as of 13:47, 23 July 2015
Short description: | p@chr10:44873807..44873824, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:44873807..44873824, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.15e-12 | 3 |
fibrocyte | 2.69e-12 | 3 |
tendon cell | 2.69e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 1.14e-11 | 3 |
smooth muscle cell of the pulmonary artery | 5.31e-10 | 1 |
fibroblast | 2.08e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
articulation | 5.27e-17 | 8 |
skeletal joint | 5.27e-17 | 8 |
articular system | 5.27e-17 | 8 |
stratified squamous epithelium | 1.15e-12 | 3 |
layer of synovial tissue | 1.15e-12 | 3 |
synovial joint | 1.15e-12 | 3 |
synovial membrane of synovial joint | 1.15e-12 | 3 |
dense regular connective tissue | 2.69e-12 | 3 |
tendon | 2.69e-12 | 3 |
regular connective tissue | 2.69e-12 | 3 |
nucleus pulposus | 1.14e-11 | 3 |
axial mesoderm | 1.14e-11 | 3 |
notochord | 1.14e-11 | 3 |
chordamesoderm | 1.14e-11 | 3 |
cranial nerve II | 1.06e-09 | 1 |
cranial nerve | 1.06e-09 | 1 |
nerve trunk | 1.06e-09 | 1 |
nerve connecting eye with brain | 1.06e-09 | 1 |
nerve | 1.06e-09 | 1 |
retinal neural layer | 1.06e-09 | 1 |
presumptive neural retina | 1.06e-09 | 1 |
intervertebral cartilage | 2.38e-07 | 5 |
symphysis | 2.38e-07 | 5 |
nonsynovial joint | 2.38e-07 | 5 |
fibrous joint | 2.38e-07 | 5 |
cartilaginous joint | 2.38e-07 | 5 |
developing mesenchymal condensation | 2.38e-07 | 5 |
pre-cartilage condensation | 2.38e-07 | 5 |
cartilaginous condensation | 2.38e-07 | 5 |
cartilage element | 2.38e-07 | 5 |
post-cranial axial skeletal system | 2.38e-07 | 5 |
vertebral column | 2.38e-07 | 5 |
intervertebral disk | 2.38e-07 | 5 |
intervertebral joint | 2.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.48e-09 | 1 |
musculoskeletal system disease | 1.96e-07 | 5 |
myotonic disease | 1.96e-07 | 5 |
muscle tissue disease | 1.96e-07 | 5 |
myopathy | 1.96e-07 | 5 |
muscular disease | 1.96e-07 | 5 |
myotonic dystrophy | 1.96e-07 | 5 |