FFCP PHASE1:Hg19::chr10:80733413..80733441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80733413..80733441,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:80733413..80733441,- | |description=CAGE_peak_at_chr10:80733413..80733441,- | ||
|id=chr10:80733413..80733441,- | |id=chr10:80733413..80733441,- | ||
|ontology_enrichment_celltype=CL:0002057!3.60e-37!42;CL:0000860!5.65e-35!45;CL:0000557!2.59e-33!71;CL:0000766!3.57e-33!76;CL:0002009!5.94e-32!65;CL:0000839!3.80e-31!70;CL:0002194!1.49e-30!63;CL:0000576!1.49e-30!63;CL:0000040!1.49e-30!63;CL:0000559!1.49e-30!63;CL:0000763!5.10e-24!112;CL:0000049!5.10e-24!112;CL:0000738!8.08e-19!140;CL:0002031!1.94e-17!124;CL:0002087!6.96e-16!119;CL:0000037!1.65e-15!172;CL:0000566!1.65e-15!172;CL:0002032!6.28e-15!165;CL:0000837!6.28e-15!165;CL:0000988!1.96e-14!182;CL:0000134!1.69e-07!358;CL:0002320!1.77e-07!365;CL:0000219!5.74e-07!390;CL:0000048!7.44e-07!430 | |ontology_enrichment_celltype=CL:0002057!3.60e-37!42;CL:0000860!5.65e-35!45;CL:0000557!2.59e-33!71;CL:0000766!3.57e-33!76;CL:0002009!5.94e-32!65;CL:0000839!3.80e-31!70;CL:0002194!1.49e-30!63;CL:0000576!1.49e-30!63;CL:0000040!1.49e-30!63;CL:0000559!1.49e-30!63;CL:0000763!5.10e-24!112;CL:0000049!5.10e-24!112;CL:0000738!8.08e-19!140;CL:0002031!1.94e-17!124;CL:0002087!6.96e-16!119;CL:0000037!1.65e-15!172;CL:0000566!1.65e-15!172;CL:0002032!6.28e-15!165;CL:0000837!6.28e-15!165;CL:0000988!1.96e-14!182;CL:0000134!1.69e-07!358;CL:0002320!1.77e-07!365;CL:0000219!5.74e-07!390;CL:0000048!7.44e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-85;33!CL:0002057;1.08e-85;33!CL:0000473;5.16e-60;39!CL:0000234;5.16e-60;39!CL:0000576;2.64e-50;48!CL:0000766;3.28e-34;69!CL:0000763;2.47e-17;100!CL:0002087;1.51e-13;104!CL:0000738;3.25e-10;136!CL:0000097;1.13e-07;5!CL:0000163;3.61e-07;9!CL:0002393;4.30e-07;6!CL:0002397;4.30e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.39e-91,42;CL:0002057,2.39e-91,42;CL:0000473,5.40e-79,48;CL:0000234,5.40e-79,48;CL:0000766,1.11e-71,72;CL:0000839,5.61e-66,66;CL:0000557,6.86e-65,67;CL:0002194,1.07e-61,59;CL:0000576,1.07e-61,59;CL:0000040,1.07e-61,59;CL:0000559,1.07e-61,59;CL:0002009,1.83e-59,61;CL:0000763,3.09e-45,108;CL:0000049,3.09e-45,108;CL:0000738,1.36e-38,136;CL:0002031,5.74e-33,120;CL:0002087,1.67e-32,115;CL:0000037,1.22e-29,168;CL:0000988,1.06e-27,177;CL:0002032,1.12e-27,161;CL:0000837,1.12e-27,161;CL:0000134,8.41e-14,354;CL:0002320,2.36e-13,361;CL:0000219,1.17e-12,386;CL:0000034,8.71e-11,441;CL:0000048,1.25e-10,427;CL:0000723,2.37e-10,433;CL:0000097,1.15e-07,5;CL:0002028,1.15e-07,5;CL:0000163,3.61e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-65;42!CL:0000049;8.56e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.24e-29!80;UBERON:0001474!5.43e-26!86;UBERON:0002390!6.45e-24!102;UBERON:0003061!6.45e-24!102;UBERON:0004765!1.10e-20!101;UBERON:0001434!1.10e-20!101;UBERON:0002193!1.00e-19!112;UBERON:0002405!1.08e-19!115;UBERON:0002204!3.46e-13!167;UBERON:0003081!5.01e-10!216;UBERON:0002384!1.90e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!1.24e-29!80;UBERON:0001474!5.43e-26!86;UBERON:0002390!6.45e-24!102;UBERON:0003061!6.45e-24!102;UBERON:0004765!1.10e-20!101;UBERON:0001434!1.10e-20!101;UBERON:0002193!1.00e-19!112;UBERON:0002405!1.08e-19!115;UBERON:0002204!3.46e-13!167;UBERON:0003081!5.01e-10!216;UBERON:0002384!1.90e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-56,76;UBERON:0001474,1.01e-51,82;UBERON:0002390,1.34e-47,98;UBERON:0003061,1.34e-47,98;UBERON:0004765,1.80e-46,90;UBERON:0002405,9.84e-45,93;UBERON:0002193,1.80e-42,108;UBERON:0001434,4.44e-41,100;UBERON:0002204,1.63e-21,167;UBERON:0003081,3.58e-20,203;UBERON:0002384,9.60e-13,371;UBERON:0000926,4.59e-10,315;UBERON:0004120,4.59e-10,315;UBERON:0006603,4.59e-10,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0.0787107813136792,2.75354993794233,0.767658796194425,5.88301268601089,0,0,0,0.0774672005803016,0,0,7.75593571944628,7.01905566145496,10.6335326650767,0,0,0.257575567634187,2.61716829803216,0.755751887377619,2.42584061187816,6.50801303335917,4.52284676824008,5.26500830521676,8.91846416198666,6.14785695669842,8.98632473576624,20.6847408441971,19.3645405075148,32.502356782642,4.51781614902251,1.91034305040492,5.16864014223695,15.9163624032869,11.2325159476633,12.7867425159808,1.31940520074686,0.797854630486527,2.55734850319616,10.7377418292576,15.8867862913519,8.71951148593805,7.28621129244555,5.73631210262222,6.95004303056373,3.63239701580021,10.3117738076518,8.22802207346299,0.422510572623884,0.425208599930087,0.838634582033504,0.561643155732475,0.300353785683013,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0.26591592103773,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,2.69526550203004,1.15295962733569,1.51490920111656,0,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.77005821767849,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0,0,2.15714200818617,1.28073069364133,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0.31396051279005,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0.146178634172371,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0.360299883542404,0,0.0787831823072236,0.247247575143499,0,0,0,0,0,0.160753148465019,0,0,0.2249738915515,0.77380195455795,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0.197611631897944,0,0,1.63205341010842,0.5013797880454,1.53172788381731,0.327872630709804,0.157054096250234,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10961172300523,0.378806010550178,0,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0.308801447160972,0,0,0,0,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,0.127894371303652,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0.127762427639595,1.0714036717565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| ||
|short_description=p@chr10:80733413..80733441,- | |short_description=p@chr10:80733413..80733441,- | ||
}} | }} |
Latest revision as of 15:51, 23 July 2015
Short description: | p@chr10:80733413..80733441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80733413..80733441, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.39e-91 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.39e-91 | 42 |
defensive cell | 5.40e-79 | 48 |
phagocyte | 5.40e-79 | 48 |
myeloid leukocyte | 1.11e-71 | 72 |
myeloid lineage restricted progenitor cell | 5.61e-66 | 66 |
granulocyte monocyte progenitor cell | 6.86e-65 | 67 |
monopoietic cell | 1.07e-61 | 59 |
monocyte | 1.07e-61 | 59 |
monoblast | 1.07e-61 | 59 |
promonocyte | 1.07e-61 | 59 |
macrophage dendritic cell progenitor | 1.83e-59 | 61 |
myeloid cell | 3.09e-45 | 108 |
common myeloid progenitor | 3.09e-45 | 108 |
leukocyte | 1.36e-38 | 136 |
hematopoietic lineage restricted progenitor cell | 5.74e-33 | 120 |
nongranular leukocyte | 1.67e-32 | 115 |
hematopoietic stem cell | 1.22e-29 | 168 |
hematopoietic cell | 1.06e-27 | 177 |
hematopoietic oligopotent progenitor cell | 1.12e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-27 | 161 |
mesenchymal cell | 8.41e-14 | 354 |
connective tissue cell | 2.36e-13 | 361 |
motile cell | 1.17e-12 | 386 |
stem cell | 8.71e-11 | 441 |
multi fate stem cell | 1.25e-10 | 427 |
somatic stem cell | 2.37e-10 | 433 |
mast cell | 1.15e-07 | 5 |
basophil mast progenitor cell | 1.15e-07 | 5 |
endocrine cell | 3.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.25e-56 | 76 |
bone element | 1.01e-51 | 82 |
hematopoietic system | 1.34e-47 | 98 |
blood island | 1.34e-47 | 98 |
skeletal element | 1.80e-46 | 90 |
immune system | 9.84e-45 | 93 |
hemolymphoid system | 1.80e-42 | 108 |
skeletal system | 4.44e-41 | 100 |
musculoskeletal system | 1.63e-21 | 167 |
lateral plate mesoderm | 3.58e-20 | 203 |
connective tissue | 9.60e-13 | 371 |
mesoderm | 4.59e-10 | 315 |
mesoderm-derived structure | 4.59e-10 | 315 |
presumptive mesoderm | 4.59e-10 | 315 |