FFCP PHASE1:Hg19::chr15:42651919..42651936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8F5 | |UniProt=F8W8F5 | ||
|association_with_transcript=136bp_to_ENST00000318023,ENST00000349748_5end | |association_with_transcript=136bp_to_ENST00000318023,ENST00000349748_5end | ||
|cluster_id=chr15:42651919..42651936,+ | |||
|description=CAGE_peak_11_at_CAPN3_5end | |description=CAGE_peak_11_at_CAPN3_5end | ||
|id=chr15:42651919..42651936,+ | |id=chr15:42651919..42651936,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.08e-34!42;CL:0000860!4.89e-31!45;CL:0000766!1.90e-28!76;CL:0000763!7.85e-22!112;CL:0000049!7.85e-22!112;CL:0000839!1.26e-21!70;CL:0002194!2.46e-21!63;CL:0000576!2.46e-21!63;CL:0000040!2.46e-21!63;CL:0000559!2.46e-21!63;CL:0000557!3.29e-21!71;CL:0002009!1.89e-20!65;CL:0000738!3.08e-12!140;CL:0000037!1.38e-11!172;CL:0000566!1.38e-11!172;CL:0002032!1.49e-11!165;CL:0000837!1.49e-11!165;CL:0000988!2.08e-10!182;CL:0002031!6.67e-09!124;CL:0002087!7.04e-09!119;CL:0000767!3.64e-08!3;CL:0000094!5.34e-08!8 | |ontology_enrichment_celltype=CL:0002057!8.08e-34!42;CL:0000860!4.89e-31!45;CL:0000766!1.90e-28!76;CL:0000763!7.85e-22!112;CL:0000049!7.85e-22!112;CL:0000839!1.26e-21!70;CL:0002194!2.46e-21!63;CL:0000576!2.46e-21!63;CL:0000040!2.46e-21!63;CL:0000559!2.46e-21!63;CL:0000557!3.29e-21!71;CL:0002009!1.89e-20!65;CL:0000738!3.08e-12!140;CL:0000037!1.38e-11!172;CL:0000566!1.38e-11!172;CL:0002032!1.49e-11!165;CL:0000837!1.49e-11!165;CL:0000988!2.08e-10!182;CL:0002031!6.67e-09!124;CL:0002087!7.04e-09!119;CL:0000767!3.64e-08!3;CL:0000094!5.34e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-22;33!CL:0002057;1.77e-22;33!CL:0000473;4.06e-16;39!CL:0000234;4.06e-16;39!CL:0000576;1.39e-11;48!CL:0000094;1.75e-10;8!CL:0000766;3.72e-10;69!CL:0000081;9.35e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.08e-19,42;CL:0002057,8.08e-19,42;CL:0000766,1.11e-17,72;CL:0000763,1.59e-17,108;CL:0000049,1.59e-17,108;CL:0000473,2.78e-16,48;CL:0000234,2.78e-16,48;CL:0002194,1.00e-12,59;CL:0000576,1.00e-12,59;CL:0000040,1.00e-12,59;CL:0000559,1.00e-12,59;CL:0002009,2.88e-12,61;CL:0000037,6.51e-12,168;CL:0000839,3.07e-11,66;CL:0000988,3.66e-11,177;CL:0000557,4.73e-11,67;CL:0002032,6.78e-11,161;CL:0000837,6.78e-11,161;CL:0000094,1.96e-10,8;CL:0000738,6.10e-10,136;CL:0000081,1.01e-07,11;CL:0002087,3.34e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;2.51e-15;42!CL:0000049;7.30e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.50e-24!102;UBERON:0003061!1.50e-24!102;UBERON:0002193!7.79e-23!112;UBERON:0002371!6.25e-18!80;UBERON:0001474!3.93e-16!86;UBERON:0002405!2.38e-15!115;UBERON:0004765!1.35e-12!101;UBERON:0001434!1.35e-12!101;UBERON:0007023!1.41e-10!115;UBERON:0003081!6.63e-09!216;UBERON:0002204!9.49e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.80e-10;1!UBERON:0000026;1.80e-10;1!UBERON:0008784;1.80e-10;1!UBERON:0006058;1.80e-10;1!UBERON:0003663;1.80e-10;1!UBERON:0004256;1.80e-10;1!UBERON:0004708;1.80e-10;1!UBERON:0002101;1.80e-10;1!UBERON:0004709;1.80e-10;1!UBERON:0002529;1.80e-10;1!UBERON:0010538;1.80e-10;1!UBERON:0003661;1.80e-10;1!UBERON:0010890;1.80e-10;1!UBERON:0002471;1.80e-10;1!UBERON:0001383;1.80e-10;1!UBERON:0010758;1.80e-10;1!UBERON:0010707;1.80e-10;1!UBERON:0000978;1.80e-10;1!UBERON:0002103;1.80e-10;1!UBERON:0001665;1.80e-10;1!UBERON:0003823;1.80e-10;1!UBERON:0000154;1.80e-10;1!UBERON:0010709;1.80e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.58e-12,98;UBERON:0003061,1.58e-12,98;UBERON:0002193,3.55e-11,108;UBERON:0005418,1.80e-10,1;UBERON:0001389,1.80e-10,1;UBERON:0000026,1.80e-10,1;UBERON:0008784,1.80e-10,1;UBERON:0006058,1.80e-10,1;UBERON:0003663,1.80e-10,1;UBERON:0004256,1.80e-10,1;UBERON:0004708,1.80e-10,1;UBERON:0002101,1.80e-10,1;UBERON:0004709,1.80e-10,1;UBERON:0002529,1.80e-10,1;UBERON:0010538,1.80e-10,1;UBERON:0003661,1.80e-10,1;UBERON:0010890,1.80e-10,1;UBERON:0002471,1.80e-10,1;UBERON:0001383,1.80e-10,1;UBERON:0004357,1.80e-10,1;UBERON:0004347,1.80e-10,1;UBERON:0005420,1.80e-10,1;UBERON:0005732,1.80e-10,1;UBERON:0010758,1.80e-10,1;UBERON:0010707,1.80e-10,1;UBERON:0000978,1.80e-10,1;UBERON:0002103,1.80e-10,1;UBERON:0001665,1.80e-10,1;UBERON:0003823,1.80e-10,1;UBERON:0000154,1.80e-10,1;UBERON:0010709,1.80e-10,1;UBERON:0005733,1.80e-10,1;UBERON:0005730,1.80e-10,1;UBERON:0002371,1.39e-09,76;UBERON:0002405,2.83e-09,93;UBERON:0001474,8.81e-09,82;UBERON:0004765,7.08e-08,90;UBERON:0001434,6.01e-07,100 | |||
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| ||
|short_description=p11@CAPN3 | |short_description=p11@CAPN3 | ||
}} | }} |
Latest revision as of 15:52, 17 September 2015
Short description: | p11@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CAPN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_ENST00000318023, ENST00000349748_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | F8W8F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.08e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.08e-19 | 42 |
myeloid leukocyte | 1.11e-17 | 72 |
myeloid cell | 1.59e-17 | 108 |
common myeloid progenitor | 1.59e-17 | 108 |
defensive cell | 2.78e-16 | 48 |
phagocyte | 2.78e-16 | 48 |
monopoietic cell | 1.00e-12 | 59 |
monocyte | 1.00e-12 | 59 |
monoblast | 1.00e-12 | 59 |
promonocyte | 1.00e-12 | 59 |
macrophage dendritic cell progenitor | 2.88e-12 | 61 |
hematopoietic stem cell | 6.51e-12 | 168 |
myeloid lineage restricted progenitor cell | 3.07e-11 | 66 |
hematopoietic cell | 3.66e-11 | 177 |
granulocyte monocyte progenitor cell | 4.73e-11 | 67 |
hematopoietic oligopotent progenitor cell | 6.78e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.78e-11 | 161 |
granulocyte | 1.96e-10 | 8 |
leukocyte | 6.10e-10 | 136 |
blood cell | 1.01e-07 | 11 |
nongranular leukocyte | 3.34e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.58e-12 | 98 |
blood island | 1.58e-12 | 98 |
hemolymphoid system | 3.55e-11 | 108 |
hindlimb bud | 1.80e-10 | 1 |
soleus muscle | 1.80e-10 | 1 |
appendage | 1.80e-10 | 1 |
lower limb segment | 1.80e-10 | 1 |
multi-limb segment region | 1.80e-10 | 1 |
hindlimb muscle | 1.80e-10 | 1 |
hindlimb zeugopod muscle | 1.80e-10 | 1 |
paired limb/fin | 1.80e-10 | 1 |
limb | 1.80e-10 | 1 |
pelvic appendage | 1.80e-10 | 1 |
limb segment | 1.80e-10 | 1 |
paired limb/fin segment | 1.80e-10 | 1 |
limb muscle | 1.80e-10 | 1 |
pelvic complex muscle | 1.80e-10 | 1 |
zeugopod | 1.80e-10 | 1 |
muscle of leg | 1.80e-10 | 1 |
paired limb/fin bud | 1.80e-10 | 1 |
limb bud | 1.80e-10 | 1 |
pelvic appendage bud | 1.80e-10 | 1 |
limb/fin field | 1.80e-10 | 1 |
subdivision of organism along appendicular axis | 1.80e-10 | 1 |
appendage girdle complex | 1.80e-10 | 1 |
leg | 1.80e-10 | 1 |
hindlimb | 1.80e-10 | 1 |
triceps surae | 1.80e-10 | 1 |
hindlimb zeugopod | 1.80e-10 | 1 |
posterior region of body | 1.80e-10 | 1 |
pelvic complex | 1.80e-10 | 1 |
limb field | 1.80e-10 | 1 |
hindlimb/pelvic fin field | 1.80e-10 | 1 |
bone marrow | 1.39e-09 | 76 |
immune system | 2.83e-09 | 93 |
bone element | 8.81e-09 | 82 |
skeletal element | 7.08e-08 | 90 |
skeletal system | 6.01e-07 | 100 |